CX290930

Overview
NameCX290930
Unique NameCX290930
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length408
Libraries
Library NameType
OF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290930 vs. ExPASy Swiss-Prot
Match: HSP82_MAIZE (Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 4.252e-38
Identity = 71/81 (87.65%), Postives = 78/81 (96.30%), Query Frame = 3
Query:  165 VSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKL 407
            VSHEW  +NKQKPIW+RKPEEIT++EYA+FYKSLTNDWE+HLAVKHFSVEGQLEFKAILFVP+RAPFDLFDTRKK NNIKL
Sbjct:  269 VSHEWVQINKQKPIWLRKPEEITRDEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAILFVPRRAPFDLFDTRKKLNNIKL 349          
BLAST of CX290930 vs. ExPASy Swiss-Prot
Match: HSP90_EIMTE (Heat shock protein 90 OS=Eimeria tenella GN=HSP90 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.047e-36
Identity = 68/81 (83.95%), Postives = 77/81 (95.06%), Query Frame = 3
Query:  165 VSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKL 407
            V+ EW  +NKQKP+WMRKPEE+T+EEYA+FYKSL+NDWEEHLAVKHFSVEGQLEFKA+LFVPKRAPFDLF+TRKK NNIKL
Sbjct:  267 VTREWEQLNKQKPLWMRKPEEVTEEEYASFYKSLSNDWEEHLAVKHFSVEGQLEFKALLFVPKRAPFDLFETRKKRNNIKL 347          
BLAST of CX290930 vs. ExPASy Swiss-Prot
Match: HSP90_THEPA (Heat shock protein 90 OS=Theileria parva GN=TP02_0244 PE=2 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 4.400e-35
Identity = 64/81 (79.01%), Postives = 75/81 (92.59%), Query Frame = 3
Query:  165 VSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKL 407
            V+ EW ++NKQKPIWMR P E+T EEYAAFYK+LTNDWE+HLAVKHFSVEGQLEFKA+LFVP+RAPFD+F++RKK NNIKL
Sbjct:  278 VTREWEMLNKQKPIWMRLPSEVTNEEYAAFYKNLTNDWEDHLAVKHFSVEGQLEFKALLFVPRRAPFDMFESRKKKNNIKL 358          
BLAST of CX290930 vs. ExPASy Swiss-Prot
Match: HSP90_THEAN (Heat shock protein 90 OS=Theileria annulata GN=TA12105 PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 1.280e-34
Identity = 63/81 (77.78%), Postives = 75/81 (92.59%), Query Frame = 3
Query:  165 VSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKL 407
            V+ EW ++NKQKPIWMR P E+T EEYA+FYK+LTNDWE+HLAVKHFSVEGQLEFKA+LFVP+RAPFD+F++RKK NNIKL
Sbjct:  279 VTREWEMLNKQKPIWMRLPTEVTNEEYASFYKNLTNDWEDHLAVKHFSVEGQLEFKALLFVPRRAPFDMFESRKKKNNIKL 359          
BLAST of CX290930 vs. ExPASy Swiss-Prot
Match: HSP90_PODAN (Heat shock protein 90 homolog OS=Podospora anserina GN=MOD-E PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 2.669e-32
Identity = 64/81 (79.01%), Postives = 72/81 (88.89%), Query Frame = 3
Query:  165 VSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKL 407
            V  E   +NKQKPIW R P++IT+EEYAAFYKSL+NDWE+HLAVKHFSVEGQLEFKAILFVPKRAPFDLF+T+K  NNIKL
Sbjct:  255 VKTEEEELNKQKPIWTRNPQDITQEEYAAFYKSLSNDWEDHLAVKHFSVEGQLEFKAILFVPKRAPFDLFETKKTKNNIKL 335          
BLAST of CX290930 vs. ExPASy Swiss-Prot
Match: HSC90_DICDI (Heat shock cognate 90 kDa protein OS=Dictyostelium discoideum GN=hspD PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 3.855e-31
Identity = 58/78 (74.36%), Postives = 70/78 (89.74%), Query Frame = 3
Query:  174 EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKL 407
            EW ++NK KP+W R P ++TKEEY +FYKS++NDWEE LAVKHFSVEGQLEFKAILFVPK+APFDLF+++KK NNIKL
Sbjct:  254 EWDVLNKTKPLWTRNPSDVTKEEYNSFYKSISNDWEEPLAVKHFSVEGQLEFKAILFVPKKAPFDLFESKKKANNIKL 331          
BLAST of CX290930 vs. ExPASy Swiss-Prot
Match: HS90A_RAT (Heat shock protein HSP 90-alpha OS=Rattus norvegicus GN=Hsp90aa1 PE=1 SV=3)

HSP 1 Score: 131.724 bits (330), Expect = 1.122e-30
Identity = 59/74 (79.73%), Postives = 66/74 (89.19%), Query Frame = 3
Query:  186 VNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKL 407
            +NK KPIW R P++IT EEY  FYKSLTNDWEEHLAVKHFSVEGQLEF+A+LFVP+RAPFDLF+ RKK NNIKL
Sbjct:  291 LNKTKPIWTRNPDDITNEEYGEFYKSLTNDWEEHLAVKHFSVEGQLEFRALLFVPRRAPFDLFENRKKKNNIKL 364          
BLAST of CX290930 vs. ExPASy Swiss-Prot
Match: HS90A_MOUSE (Heat shock protein HSP 90-alpha OS=Mus musculus GN=Hsp90aa1 PE=1 SV=4)

HSP 1 Score: 131.724 bits (330), Expect = 1.122e-30
Identity = 59/74 (79.73%), Postives = 66/74 (89.19%), Query Frame = 3
Query:  186 VNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKL 407
            +NK KPIW R P++IT EEY  FYKSLTNDWEEHLAVKHFSVEGQLEF+A+LFVP+RAPFDLF+ RKK NNIKL
Sbjct:  291 LNKTKPIWTRNPDDITNEEYGEFYKSLTNDWEEHLAVKHFSVEGQLEFRALLFVPRRAPFDLFENRKKKNNIKL 364          
BLAST of CX290930 vs. ExPASy Swiss-Prot
Match: HS90A_CRIGR (Heat shock protein HSP 90-alpha OS=Cricetulus griseus GN=HSP90AA1 PE=2 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 1.122e-30
Identity = 59/74 (79.73%), Postives = 66/74 (89.19%), Query Frame = 3
Query:  186 VNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKL 407
            +NK KPIW R P++IT EEY  FYKSLTNDWEEHLAVKHFSVEGQLEF+A+LFVP+RAPFDLF+ RKK NNIKL
Sbjct:  291 LNKTKPIWTRNPDDITNEEYGEFYKSLTNDWEEHLAVKHFSVEGQLEFRALLFVPRRAPFDLFENRKKKNNIKL 364          
BLAST of CX290930 vs. ExPASy Swiss-Prot
Match: HSP90_SCHPO (Heat shock protein 90 homolog OS=Schizosaccharomyces pombe GN=swo1 PE=1 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 1.913e-30
Identity = 58/74 (78.38%), Postives = 67/74 (90.54%), Query Frame = 3
Query:  186 VNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKL 407
            +NK KPIW R P E+TKEEYA+FYKSLTNDWE+HLAVKHFSVEGQLEF+AILFVP+RAP DLF+ ++K NNIKL
Sbjct:  265 LNKTKPIWTRNPSEVTKEEYASFYKSLTNDWEDHLAVKHFSVEGQLEFRAILFVPRRAPMDLFEAKRKKNNIKL 338          
The following BLAST results are available for this feature:
BLAST of CX290930 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
HSP82_MAIZE4.252e-3887.65Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV... [more]
HSP90_EIMTE1.047e-3683.95Heat shock protein 90 OS=Eimeria tenella GN=HSP90 ... [more]
HSP90_THEPA4.400e-3579.01Heat shock protein 90 OS=Theileria parva GN=TP02_0... [more]
HSP90_THEAN1.280e-3477.78Heat shock protein 90 OS=Theileria annulata GN=TA1... [more]
HSP90_PODAN2.669e-3279.01Heat shock protein 90 homolog OS=Podospora anserin... [more]
HSC90_DICDI3.855e-3174.36Heat shock cognate 90 kDa protein OS=Dictyostelium... [more]
HS90A_RAT1.122e-3079.73Heat shock protein HSP 90-alpha OS=Rattus norvegic... [more]
HS90A_MOUSE1.122e-3079.73Heat shock protein HSP 90-alpha OS=Mus musculus GN... [more]
HS90A_CRIGR1.122e-3079.73Heat shock protein HSP 90-alpha OS=Cricetulus gris... [more]
HSP90_SCHPO1.913e-3078.38Heat shock protein 90 homolog OS=Schizosaccharomyc... [more]

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Properties
Property NameValue
Genbank descriptionC03001H06Rv OF1 Citrus clementina cDNA clone C03001H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290930 ID=CX290930; Name=CX290930; organism=Citrus clementina; type=EST; length=408bp
CTGAGTTCATTAGTTACCCAATTTCCCTCTGGATTGAGAAGACCACTGAG
AAGGAGATTTCTGATGATGAGGACGAGGAAGAAAAGAAGGATGAGGAGGG
TAAAGTTGAGGATGTTGATGAAGAGAAAGAGAAGGAAGAGAAGAAGAAGA
AGAAGATCAAGGAGGTGTCCCATGAGTGGTCATTGGTGAACAAGCAGAAA
CCCATTTGGATGAGGAAACCCGAGGAGATTACAAAAGAAGAGTATGCTGC
CTTCTACAAGAGTCTGACTAATGACTGGGAGGAGCACTTGGCTGTGAAGC
ACTTCTCAGTTGAGGGCCAGCTTGAGTTTAAGGCTATCCTCTTTGTTCCC
AAGAGGGCACCTTTTGATCTCTTTGACACAAGGAAGAAGCCCAATAACAT
CAAGCTCT
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