CX290934

Overview
NameCX290934
Unique NameCX290934
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length410
Libraries
Library NameType
OF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX290934 vs. ExPASy Swiss-Prot
Match: GEM1_CANAL (Mitochondrial Rho GTPase 1 OS=Candida albicans GN=GEM1 PE=3 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 6.358e-18
Identity = 42/104 (40.38%), Postives = 59/104 (56.73%), Query Frame = 1 
Query:   31 PIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVSVKRFVQEK 342
            P++ +F+EIE  V CSA     V + FY  Q+AV HP +P+FD  E  LKP  ++ LKRIF + D D DG LN  EL+E   KCF      ++   +   + +K
Sbjct:  117 PLINEFKEIEAGVRCSAKNNYNVVEAFYLCQRAVTHPISPIFDAKEGNLKPGAIKPLKRIFWLSDTDQDGYLNFEELSELHKKCFGIEASKSDYEEIVNLIDQK 220
The following BLAST results are available for this feature:
BLAST of CX290934 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
GEM1_CANAL6.358e-1840.38Mitochondrial Rho GTPase 1 OS=Candida albicans GN=... [more]

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Properties
Property NameValue
Genbank descriptionC03001H10Rv OF1 Citrus clementina cDNA clone C03001H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290934 ID=CX290934; Name=CX290934; organism=Citrus clementina; type=EST; length=410bp
AATGCCACAAGCCTCGAGGAGGTTATGGGACCAATCATGCAACAGTTCAG
GGAGATTGAAACTTGTGTAGAATGTTCTGCAACTACTATGATTCAGGTCC
CTGATGTTTTCTATTATGCTCAAAAAGCAGTACTTCATCCAACAGCTCCA
TTGTTTGATCACGATGAACAAACTTTGAAACCTCGGTGCGTCAGGGCATT
GAAAAGGATATTTATTATCTGTGATCATGACATGGACGGTGCCCTAAATG
ATGCAGAGTTAAATGAGTTTCAGGTTAAATGTTTTAATGCTCCATTACAG
CCTGCTGAAATAGTAAGCGTAAAGAGGTTTGTACAAGAGAAGCAGCATGA
TGGAGTCAATGACCTTGGTCTTACCCTTAGTGGTTTCCTTTTCCTCCATG
CTCTTTTCAT
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