CX290954
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290954 vs. ExPASy Swiss-Prot
Match: GLN13_ORYSJ (Glutamine synthetase cytosolic isozyme 1-3 OS=Oryza sativa subsp. japonica GN=GLN1-3 PE=2 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 2.963e-62 Identity = 110/174 (63.22%), Postives = 131/174 (75.29%), Query Frame = 2 Query: 107 TEKVIAEYVWIGGSGMDLRSKARTLPAPTTDPTKLPKWNYDGSSTNQAPGDDSEVILYPQTVFKDPFRRGNNILVMCDAYTPAGEPIPTNKRFNAAKVFGHPDVVAEEPWYGIEQEYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKAFRPETFVNSYYKACFTLELTISG 628 T+KVIAEY+W+GG+GMD+RSKARTL P DP+KLPKWN+DGSST QA GDDSEVIL+PQ +F+DPFR+G NILVMCD Y P GEPIPTN R+NAA++F HPDV AEEPWYGIEQEYTLLQK INWPL ADK++ + V+++YKAC + ISG Sbjct: 18 TDKVIAEYIWVGGTGMDVRSKARTLSGPVDDPSKLPKWNFDGSSTGQATGDDSEVILHPQAIFRDPFRKGKNILVMCDCYAPNGEPIPTNNRYNAARIFSHPDVKAEEPWYGIEQEYTLLQKHINWPLGWPLGGYPGPQGPYYCAAGADKSYGRD-IVDAHYKACLFAGINISG 190
BLAST of CX290954 vs. ExPASy Swiss-Prot
Match: GLNA1_ALNGL (Glutamine synthetase OS=Alnus glutinosa GN=GLN1 PE=2 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 5.588e-61 Identity = 113/174 (64.94%), Postives = 128/174 (73.56%), Query Frame = 2 Query: 107 TEKVIAEYVWIGGSGMDLRSKARTLPAPTTDPTKLPKWNYDGSSTNQAPGDDSEVILYPQTVFKDPFRRGNNILVMCDAYTPAGEPIPTNKRFNAAKVFGHPDVVAEEPWYGIEQEYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKAFRPETFVNSYYKACFTLELTISG 628 T+KVIAEY+WIGGSG DLRSKARTL P P+KLPKWNYDGSST QAPG+DSEVI + FKDPFRRGNNILV+CD YTPAGEPIPTNKR AAK+F HP+VVAE PWYGIEQEYTLLQKD+ WPL ADKA+ + V+++YKAC + ISG Sbjct: 16 TDKVIAEYIWIGGSGTDLRSKARTLTGPVNHPSKLPKWNYDGSSTGQAPGEDSEVIYILRQFFKDPFRRGNNILVICDTYTPAGEPIPTNKRHGAAKIFSHPEVVAEVPWYGIEQEYTLLQKDVKWPLGWPVGGYPGPQGPYYCGIGADKAWGRD-IVDAHYKACLYAGINISG 188
BLAST of CX290954 vs. ExPASy Swiss-Prot
Match: GLNA2_ORYSJ (Glutamine synthetase, chloroplastic OS=Oryza sativa subsp. japonica GN=GLN2 PE=1 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 6.178e-60 Identity = 106/174 (60.92%), Postives = 131/174 (75.29%), Query Frame = 2 Query: 107 TEKVIAEYVWIGGSGMDLRSKARTLPAPTTDPTKLPKWNYDGSSTNQAPGDDSEVILYPQTVFKDPFRRGNNILVMCDAYTPAGEPIPTNKRFNAAKVFGHPDVVAEEPWYGIEQEYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKAFRPETFVNSYYKACFTLELTISG 628 T+K+IAEY+W+GG+G+DLRSK+RT+ P DP++LPKWNYDGSST QAPG+DSEVILYPQ +FKDPFR GNNILVMCD YTPAGEPIPTNKR AA+VF P VV++ PW+GIEQEYTLLQ+D+NWPL +DK+F + +++YKAC + ISG Sbjct: 72 TDKIIAEYIWVGGTGIDLRSKSRTISKPVEDPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVMCDTYTPAGEPIPTNKRNRAAQVFSDPKVVSQVPWFGIEQEYTLLQRDVNWPLGWPVGGYPGPQGPYYCAVGSDKSFGRD-ISDAHYKACLYAGINISG 244
BLAST of CX290954 vs. ExPASy Swiss-Prot
Match: GLNA4_PHAVU (Glutamine synthetase leaf isozyme, chloroplastic OS=Phaseolus vulgaris PE=2 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 3.066e-59 Identity = 106/174 (60.92%), Postives = 131/174 (75.29%), Query Frame = 2 Query: 107 TEKVIAEYVWIGGSGMDLRSKARTLPAPTTDPTKLPKWNYDGSSTNQAPGDDSEVILYPQTVFKDPFRRGNNILVMCDAYTPAGEPIPTNKRFNAAKVFGHPDVVAEEPWYGIEQEYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKAFRPETFVNSYYKACFTLELTISG 628 T+K+IAEY+WIGG+G+D+RSK+RT+ P P++LPKWNYDGSST QAPG+DSEVILYPQ +FKDPFR GNNILV+CDAYTPAGEPIPTNKR AA+VF +P V+AE PW+GIEQEYTLLQ ++NWPL ADK+F + +++YKAC + ISG Sbjct: 73 TDKIIAEYIWIGGTGIDVRSKSRTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDAYTPAGEPIPTNKRHRAAEVFSNPRVIAEVPWFGIEQEYTLLQTNVNWPLGWPVGGYPGPQGPYYCSAGADKSFGRD-ISDAHYKACLFAGINISG 245
BLAST of CX290954 vs. ExPASy Swiss-Prot
Match: GLNA1_DAUCA (Glutamine synthetase cytosolic isozyme OS=Daucus carota GN=GLN1 PE=2 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 6.831e-59 Identity = 110/174 (63.22%), Postives = 127/174 (72.99%), Query Frame = 2 Query: 107 TEKVIAEYVWIGGSGMDLRSKARTLPAPTTDPTKLPKWNYDGSSTNQAPGDDSEVILYPQTVFKDPFRRGNNILVMCDAYTPAGEPIPTNKRFNAAKVFGHPDVVAEEPWYGIEQEYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKAFRPETFVNSYYKACFTLELTISG 628 T+K IAEY+WI G LRSKARTL P DPTKLPKWN+DGSST Q PGDDSEVI+YPQ +FKDPFRRGN+ILVMCD YTPAGEPIPTNKR NAAK+F HPDV AE PW+GIEQEYTLL+K++N P+ ADKAF + V+++YKAC + ISG Sbjct: 16 TDKFIAEYIWIDAVG-GLRSKARTLSGPVDDPTKLPKWNFDGSSTGQGPGDDSEVIIYPQAIFKDPFRRGNHILVMCDTYTPAGEPIPTNKRCNAAKIFSHPDVAAEVPWFGIEQEYTLLKKEVNCPIGCPTGGYPGPQGPYYCGIGADKAFGRD-IVDAHYKACLYAGINISG 187
BLAST of CX290954 vs. ExPASy Swiss-Prot
Match: GLNAC_MAIZE (Glutamine synthetase, chloroplastic OS=Zea mays GN=GLN2 PE=2 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 1.522e-58 Identity = 103/174 (59.20%), Postives = 128/174 (73.56%), Query Frame = 2 Query: 107 TEKVIAEYVWIGGSGMDLRSKARTLPAPTTDPTKLPKWNYDGSSTNQAPGDDSEVILYPQTVFKDPFRRGNNILVMCDAYTPAGEPIPTNKRFNAAKVFGHPDVVAEEPWYGIEQEYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKAFRPETFVNSYYKACFTLELTISG 628 T+KVIAEY+W+GGSG+D+RSK+RT+ P DP++LPKWNYDGSST QAPG+DSEVILYPQ +FKDPFR GNN+LV+CD YTP GEP+PTNKR AA++F P V + PW+GIEQEYTLLQKD+NWPL ADK+F + +++YKAC + ISG Sbjct: 67 TDKVIAEYIWVGGSGIDIRSKSRTISKPVEDPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNVLVICDTYTPQGEPLPTNKRHRAAQIFSDPKVGEQVPWFGIEQEYTLLQKDVNWPLGWPVGGFPGPQGPYYCAVGADKSFGRD-ISDAHYKACLYAGINISG 239
BLAST of CX290954 vs. ExPASy Swiss-Prot
Match: GLNA2_HORVU (Glutamine synthetase leaf isozyme, chloroplastic OS=Hordeum vulgare PE=2 SV=2) HSP 1 Score: 224.942 bits (572), Expect = 2.596e-58 Identity = 102/174 (58.62%), Postives = 129/174 (74.14%), Query Frame = 2 Query: 107 TEKVIAEYVWIGGSGMDLRSKARTLPAPTTDPTKLPKWNYDGSSTNQAPGDDSEVILYPQTVFKDPFRRGNNILVMCDAYTPAGEPIPTNKRFNAAKVFGHPDVVAEEPWYGIEQEYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKAFRPETFVNSYYKACFTLELTISG 628 T+K+IAEY+W+GGSG+DLRSK+RT+ P DP++LPKWNYDGSST QAPG+DSEVILYPQ +FKDPFR GNNILV+CD YTP GEPIPTNKR AA++F P V ++ PW+GIEQEYTL+Q+D+NWPL +DK+F + +++YKAC + ISG Sbjct: 78 TDKIIAEYIWVGGSGIDLRSKSRTISKPVEDPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPQGEPIPTNKRHMAAQIFSDPKVTSQVPWFGIEQEYTLMQRDVNWPLGWPVGGYPGPQGPYYCAVGSDKSFGRD-ISDAHYKACLYAGIEISG 250
BLAST of CX290954 vs. ExPASy Swiss-Prot
Match: GLNA2_MAIZE (Glutamine synthetase root isozyme 2 OS=Zea mays GN=GLN2 PE=2 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 3.390e-58 Identity = 108/174 (62.07%), Postives = 126/174 (72.41%), Query Frame = 2 Query: 107 TEKVIAEYVWIGGSGMDLRSKARTLPAPTTDPTKLPKWNYDGSSTNQAPGDDSEVILYPQTVFKDPFRRGNNILVMCDAYTPAGEPIPTNKRFNAAKVFGHPDVVAEEPWYGIEQEYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKAFRPETFVNSYYKACFTLELTISG 628 T K+IAEY+W+GGSGMD+RSKARTL P DP+KLPKWN+DGSST QAPGDDSEVIL P+ +F+DPFR+G NILVMCD Y P GEPIP+NKR AAK+F HPDV AEEPW+GIEQEYTLLQKD WPL ADK++ + V+ YKAC + ISG Sbjct: 16 TGKIIAEYIWVGGSGMDVRSKARTLSGPVDDPSKLPKWNFDGSSTGQAPGDDSEVILCPRAIFRDPFRKGQNILVMCDCYEPNGEPIPSNKRHGAAKIFSHPDVKAEEPWFGIEQEYTLLQKDTKWPL-GWPLAYPGPQGPYYCAAGADKSYGRD-IVDCAYKACLYAGIDISG 187
BLAST of CX290954 vs. ExPASy Swiss-Prot
Match: GLNA2_MEDSA (Glutamine synthetase leaf isozyme, chloroplastic OS=Medicago sativa GN=GS2 PE=2 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 9.864e-58 Identity = 104/174 (59.77%), Postives = 127/174 (72.99%), Query Frame = 2 Query: 107 TEKVIAEYVWIGGSGMDLRSKARTLPAPTTDPTKLPKWNYDGSSTNQAPGDDSEVILYPQTVFKDPFRRGNNILVMCDAYTPAGEPIPTNKRFNAAKVFGHPDVVAEEPWYGIEQEYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKAFRPETFVNSYYKACFTLELTISG 628 T+ +IAEY+WIGG+G+D+RSK+RT+ P P++LPKWNYDGSST QAPG+DSEVILYPQ +FKDPFR GNNILV+CDAYTP GEPIPTNKR AA++F +P V AE PWYGIEQEYTLLQ D+ WPL ADK+F + +++YKAC + ISG Sbjct: 72 TDSIIAEYIWIGGTGIDVRSKSRTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDAYTPQGEPIPTNKRHKAAEIFSNPKVEAEIPWYGIEQEYTLLQTDVKWPLGWPVGGYPGPQGPYYCAAGADKSFGRD-ISDAHYKACLYAGINISG 244
BLAST of CX290954 vs. ExPASy Swiss-Prot
Match: GLNA2_PEA (Glutamine synthetase leaf isozyme, chloroplastic OS=Pisum sativum GN=GS2 PE=2 SV=2) HSP 1 Score: 222.631 bits (566), Expect = 1.288e-57 Identity = 103/174 (59.20%), Postives = 129/174 (74.14%), Query Frame = 2 Query: 107 TEKVIAEYVWIGGSGMDLRSKARTLPAPTTDPTKLPKWNYDGSSTNQAPGDDSEVILYPQTVFKDPFRRGNNILVMCDAYTPAGEPIPTNKRFNAAKVFGHPDVVAEEPWYGIEQEYTLLQKDINWPLXXXXXXXXXXXXXXXXXXXADKAFRPETFVNSYYKACFTLELTISG 628 T+ +IAEY+WIGG+G+D+RSK+RT+ P + P+++PKWNYDGSST QAPG+DSEVILYPQ +FKDPFR GNNILV+CDAYTPAGEPIPTNKR AA++F +P V AE PWYGIEQEYTLLQ ++ WPL ADK+F + +++YKAC + ISG Sbjct: 74 TDSIIAEYIWIGGTGIDVRSKSRTISKPVSHPSEVPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVVCDAYTPAGEPIPTNKRHRAAEIFSNPKVEAEIPWYGIEQEYTLLQTNVKWPLGWPVGGYPGPQGPYYCAAGADKSFGRD-ISDAHYKACIYAGINISG 246 The following BLAST results are available for this feature:
BLAST of CX290954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290954 ID=CX290954; Name=CX290954; organism=Citrus clementina; type=EST; length=633bpback to top |