CX290969

Overview
NameCX290969
Unique NameCX290969
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length649
Libraries
Library NameType
OF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290969 vs. ExPASy Swiss-Prot
Match: EF1A_HELAL (Elongation factor 1-alpha (Fragment) OS=Heliocheilus albipunctella PE=3 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 6.989e-70
Identity = 129/158 (81.65%), Postives = 140/158 (88.61%), Query Frame = 2
Query:  104 HVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAXTPKYSKAXYDEIXK 577
            HVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I   NKMD+  P YS++ ++EI K
Sbjct:    1 HVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKK 158          
BLAST of CX290969 vs. ExPASy Swiss-Prot
Match: EF1A_ANIIF (Elongation factor 1-alpha (Fragment) OS=Anicla infecta PE=3 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 6.989e-70
Identity = 129/158 (81.65%), Postives = 140/158 (88.61%), Query Frame = 2
Query:  104 HVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAXTPKYSKAXYDEIXK 577
            HVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I   NKMD+  P YS++ ++EI K
Sbjct:    1 HVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKK 158          
BLAST of CX290969 vs. ExPASy Swiss-Prot
Match: EF1A_ADIBE (Elongation factor 1-alpha (Fragment) OS=Adisura bella PE=3 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 6.989e-70
Identity = 129/158 (81.65%), Postives = 140/158 (88.61%), Query Frame = 2
Query:  104 HVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAXTPKYSKAXYDEIXK 577
            HVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I   NKMD+  P YS++ ++EI K
Sbjct:    1 HVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKK 158          
BLAST of CX290969 vs. ExPASy Swiss-Prot
Match: EF1A1_XENLA (Elongation factor 1-alpha OS=Xenopus laevis PE=1 SV=2)

HSP 1 Score: 259.225 bits (661), Expect = 1.318e-68
Identity = 120/193 (62.18%), Postives = 151/193 (78.24%), Query Frame = 2
Query:   53 LTAMGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAXTPKYSKAXYDEIXKGGLFLPEEXWIQPRESPF 631
            +T    +KTH+NIV+IGHVDSGKSTTTGHLIYK GG D R +E+ E  AA++ K SFK+AW+LDKLKAERERGITIDI+LWKF+T ++  T+IDAPGHRDFIKNMITGTSQAD A+L++ + TG FEAG+S++GQTREHALLA+T+GVKQ+I C NKMD   P YS   +DE+ +  +   ++    P   PF
Sbjct:    1 MTDKAPQKTHLNIVIIGHVDSGKSTTTGHLIYKCGGFDPRALEKVEAAAAQLGKSSFKFAWILDKLKAERERGITIDISLWKFQTNRFTITIIDAPGHRDFIKNMITGTSQADVALLVVSAATGEFEAGVSRNGQTREHALLAYTMGVKQLIVCVNKMDLTDPPYSHKRFDEVVRNVMVYLKKIGYNPATIPF 193          
BLAST of CX290969 vs. ExPASy Swiss-Prot
Match: EF1A_BLAHO (Elongation factor 1-alpha OS=Blastocystis hominis PE=2 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 3.473e-68
Identity = 128/170 (75.29%), Postives = 141/170 (82.94%), Query Frame = 2
Query:   62 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAXTPKYSKAXYDEI 571
            MGKEK HIN+VVIGHV +GKSTTTGHLIY  GGIDKR IERFE+    + K SFKYAWVL K+KAERERGITIDI+LWKFET K + T+IDAPGHRDFIKNMITGTSQAD A+L+I S  G FEAG SK+GQTREHALLA TLGVKQMI CCNKMD  +  YS+A Y EI
Sbjct:    1 MGKEKPHINLVVIGHVVAGKSTTTGHLIYACGGIDKRTIERFEEGGQRIGKGSFKYAWVLAKMKAERERGITIDISLWKFETRKDFFTIIDAPGHRDFIKNMITGTSQADVAILVIASGAGEFEAGYSKNGQTREHALLANTLGVKQMIVCCNKMDDKSVNYSEARYKEI 170          

HSP 2 Score: 22.7126 bits (47), Expect = 3.473e-68
Identity = 10/29 (34.48%), Postives = 18/29 (62.07%), Query Frame = 3
Query:  567 KLXKEVSFYLKXGGYNP--EKVPFVPIFG 647
            ++  E++ +L   GY    E++PF+PI G
Sbjct:  169 EIKNEMTSFLTKVGYAKVEERIPFIPISG 197          
BLAST of CX290969 vs. ExPASy Swiss-Prot
Match: EF1AS_PORPU (Elongation factor 1-alpha S OS=Porphyra purpurea GN=TEF-S PE=2 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 3.360e-64
Identity = 124/174 (71.26%), Postives = 141/174 (81.03%), Query Frame = 2
Query:   62 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAXTPK----YSKAXYDEI 571
            MGKEKTHIN+VVIGHVD+GKSTTTGHLIYKLGGID R I +FE +A EM K SFKYAWVLDKLKAERERGITIDIALWKF T K+  TVIDAPGHRDFIKNMITGTSQAD A+L+ID     FEAGI++ G T+EHALLA+TLGVKQ+    NKMD    K    +++  Y+E+
Sbjct:    1 MGKEKTHINLVVIGHVDAGKSTTTGHLIYKLGGIDARTIAKFEADAKEMGKSSFKYAWVLDKLKAERERGITIDIALWKFSTAKFEYTVIDAPGHRDFIKNMITGTSQADVALLVIDG--NNFEAGIAEGGSTKEHALLAYTLGVKQLAVGINKMDDVKDKDGGPWAQGRYNEV 172          
BLAST of CX290969 vs. ExPASy Swiss-Prot
Match: EF1A_HYPBU (Elongation factor 1-alpha OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=tuf PE=3 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 5.551e-59
Identity = 104/170 (61.18%), Postives = 133/170 (78.24%), Query Frame = 2
Query:   62 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAXTPKYSKAXYDEI 571
            M ++K HIN+VVIGHVD GKST  GHL+Y+LG +D++ I+  E+EA +  K SFKYAW+LD+LK ERERG+TID+   KFET KYY T+IDAPGHRDF+KNMITG SQAD A+L++ +  G FEAG+S +GQTREH +LA T+G+ Q+I   NKMDA  P YSK  Y++I
Sbjct:    1 MSQQKPHINLVVIGHVDHGKSTLVGHLLYRLGFVDEKTIKMLEEEAKKKGKESFKYAWLLDRLKEERERGVTIDLTFVKFETKKYYFTIIDAPGHRDFVKNMITGASQADAAILVVSARRGEFEAGMSAEGQTREHLILAKTMGIDQLIVAVNKMDATEPPYSKQRYEQI 170          
BLAST of CX290969 vs. ExPASy Swiss-Prot
Match: EF1A_GIALA (Elongation factor 1-alpha (Fragment) OS=Giardia lamblia GN=TEF1 PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.615e-58
Identity = 111/150 (74.00%), Postives = 122/150 (81.33%), Query Frame = 2
Query:  122 STTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAXTPKYSKAXYDEI 571
            ST TGHLIYK GGID+R I+ +EK A EM K SFKYAWVLD+LK ERERGITI+IALWKFET KY  T+IDAPGHRDFIKNMITGTSQAD A+L++ +  G FEAGISKDGQTREHA LA TLG+K MI C NKMD    KYSK  YDEI
Sbjct:    1 STLTGHLIYKCGGIDQRTIDEYEKRATEMGKGSFKYAWVLDQLKDERERGITINIALWKFETKKYIVTIIDAPGHRDFIKNMITGTSQADVAILVVAAGQGEFEAGISKDGQTREHATLANTLGIKTMIICVNKMDDGQVKYSKERYDEI 150          
BLAST of CX290969 vs. ExPASy Swiss-Prot
Match: EF1A_IGNH4 (Elongation factor 1-alpha OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=tuf PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 8.015e-58
Identity = 103/168 (61.31%), Postives = 131/168 (77.98%), Query Frame = 2
Query:   68 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAXTPKYSKAXYDEI 571
            KEK H+N++VIGHVD GKST  GHL+Y+LG +D++ ++  E+EA +  K SFKYAW+LDKLK ERERG+TID+   KFET KYY T+IDAPGHRDFIKNMITG SQAD A+L++ +  G FEAG+S +GQTREH LLA T+G+ Q+I   NKMDA  P +S+  Y +I
Sbjct:    4 KEKPHMNLIVIGHVDHGKSTLVGHLLYELGFVDEKTLKMLEEEAKKRGKESFKYAWLLDKLKEERERGVTIDLTFMKFETPKYYFTIIDAPGHRDFIKNMITGASQADAAILVVSARPGEFEAGMSAEGQTREHILLAKTMGIDQIIVAVNKMDATEPPWSEKRYKQI 171          
BLAST of CX290969 vs. ExPASy Swiss-Prot
Match: EF1A_DESMO (Elongation factor 1-alpha OS=Desulfurococcus mobilis GN=tuf PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 3.046e-57
Identity = 98/167 (58.68%), Postives = 133/167 (79.64%), Query Frame = 2
Query:   71 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDAXTPKYSKAXYDEI 571
            +K H+NIV+IGHVD GKST TGH++Y+LG  D++ ++  E+E+ +M K SFK+AW+LD++K ERERG+TI ++  KFET KY+ T+IDAPGHRDF+KNMITG SQAD A+L++ +  G FEAG+S +GQTREHA+LA T+G+ Q+I   NKMDA  P YS+  Y+EI
Sbjct:    5 QKPHLNIVIIGHVDHGKSTMTGHILYRLGYFDEKTVKMIEEESKKMGKESFKFAWLLDRMKEERERGVTISLSYMKFETKKYFFTIIDAPGHRDFVKNMITGASQADAAILVVSARKGEFEAGMSAEGQTREHAILARTMGINQLIVAINKMDATEPPYSEKRYNEI 171          
The following BLAST results are available for this feature:
BLAST of CX290969 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF1A_HELAL6.989e-7081.65Elongation factor 1-alpha (Fragment) OS=Heliocheil... [more]
EF1A_ANIIF6.989e-7081.65Elongation factor 1-alpha (Fragment) OS=Anicla inf... [more]
EF1A_ADIBE6.989e-7081.65Elongation factor 1-alpha (Fragment) OS=Adisura be... [more]
EF1A1_XENLA1.318e-6862.18Elongation factor 1-alpha OS=Xenopus laevis PE=1 S... [more]
EF1A_BLAHO3.473e-6875.29Elongation factor 1-alpha OS=Blastocystis hominis ... [more]
EF1AS_PORPU3.360e-6471.26Elongation factor 1-alpha S OS=Porphyra purpurea G... [more]
EF1A_HYPBU5.551e-5961.18Elongation factor 1-alpha OS=Hyperthermus butylicu... [more]
EF1A_GIALA1.615e-5874.00Elongation factor 1-alpha (Fragment) OS=Giardia la... [more]
EF1A_IGNH48.015e-5861.31Elongation factor 1-alpha OS=Ignicoccus hospitalis... [more]
EF1A_DESMO3.046e-5758.68Elongation factor 1-alpha OS=Desulfurococcus mobil... [more]

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Properties
Property NameValue
Genbank descriptionC03002D01Rv OF1 Citrus clementina cDNA clone C03002D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290969 ID=CX290969; Name=CX290969; organism=Citrus clementina; type=EST; length=649bp
CTTGCTTGCTCTGCGGCTAGGTTTCAATTGTCTCTTCGAAGTTTCAGTTA
ATTTAACAGCCATGGGTAAGGAGAAGACTCACATCAACATTGTGGTGATT
GGCCATGTCGACTCTGGAAAGTCGACCACCACCGGACACTTGATCTACAA
GCTTGGTGGTATTGACAAGCGTGTGATCGAGAGGTTCGAGAAGGAAGCTG
CTGAGATGAACAAGAGGTCATTCAAGTACGCCTGGGTGCTCGACAAGCTC
AAGGCTGAGCGTGAACGTGGTATTACCATTGATATTGCCTTGTGGAAGTT
CGAGACCACCAAGTACTACTGCACCGTCATTGATGCTCCCGGACATCGTG
ACTTTATCAAGAACATGATTACCGGTACCTCACAGGCTGACTGTGCCGTC
CTTATCATTGACTCCACCACCGGTGGTTTTGAAGCTGGTATCTCCAAGGA
TGGTCAGACTCGTGAGCATGCTTTGCTTGCTTTCACCCTTGGTGTGAAGC
AAATGATTTGCTGCTGTAACAAGATGGACGCCNCCACCCCCAAGTACTCA
AAGGCTANGTACGATGAAATTGNGAAAGGAGGTCTCTTTCTACCTGAAGA
ANGGTGGATACAACCCCGAGAAAGTCCCTTTCGTGCCCATCTTTGGTTT
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