CX290985

Overview
NameCX290985
Unique NameCX290985
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length505
Libraries
Library NameType
OF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290985 vs. ExPASy Swiss-Prot
Match: CYSP3_DICDI (Cysteine proteinase 3 OS=Dictyostelium discoideum GN=cprC PE=3 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 7.466e-16
Identity = 52/133 (39.10%), Postives = 68/133 (51.13%), Query Frame = 3
Query:  129 VIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVL--------PETKDWRESGIVSPVKDQGHCGSCWTFSTTGS 503
            V    ++  SF  + R   K Y   E M  R+  F KN+D + + N KG    LGLN+ AD S EE++ + LG   +      G HK    +         P   DWRE   V+PVKDQG CGSC++FSTTGS
Sbjct:   24 VFSHKQYQDSFIDWMRSNNKAYTHKEFMP-RYEEFKKNMDYVHNWNSKGSKTVLGLNQHADLSNEEYRLNYLGTRAHIKLN--GYHKRNLGLRLNRPQFKQPLNVDWREKDAVTPVKDQGQCGSCYSFSTTGS 153          
BLAST of CX290985 vs. ExPASy Swiss-Prot
Match: CFAD_DICDI (Counting factor associated protein D OS=Dictyostelium discoideum GN=cfaD PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 7.466e-16
Identity = 47/119 (39.50%), Postives = 63/119 (52.94%), Query Frame = 3
Query:  159 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADV----LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGS 503
            F  +  +Y K Y S +E   RF  F     +I + N K  SY+LG+N +AD S +EF  + L   +    +  G   +  D     +P T DWR    V+PVKDQG CGSCWTF +TGS
Sbjct:  225 FKEYKAQYNKEYSSQDEHDERFINFKAARKIIATHNAKESSYKLGMNHYADLSNKEF--NTLVKPKVARPSVTGADSVHDDESLRSIPSTVDWRNQNCVTPVKDQGICGSCWTFGSTGS 341          
BLAST of CX290985 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 9.752e-16
Identity = 47/118 (39.83%), Postives = 64/118 (54.24%), Query Frame = 3
Query:  159 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKG----LSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTA---DVLPETKDWRESGIVSPVKDQGHCGSCWTFS 491
            +A +   +GK Y +V E + R+A F  NL  I   N        S+RLGLN+FAD + EE++   LG         K + +  A   + LPE+ DWR  G V+ +KDQG CGSCW FS
Sbjct:   40 YAEWKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRLGLNRFADLTNEEYRDTYLGLRNKPRRERKVSDRYLAADNEALPESVDWRTKGAVAEIKDQGGCGSCWAFS 157          
BLAST of CX290985 vs. ExPASy Swiss-Prot
Match: CYSP6_DICDI (Cysteine proteinase 6 OS=Dictyostelium discoideum GN=cprF PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.663e-15
Identity = 46/127 (36.22%), Postives = 68/127 (53.54%), Query Frame = 3
Query:  126 QVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKG-NHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGS 503
            Q + + ++  +F  +   + + Y S EE   RF  F  N+D I   N KG    LGLN FAD + EE++   LG   + S+     + K+   V   + DWR  G V+P+K+QG CG CW+FS TG+
Sbjct:   19 QQLSELQYRNAFTNWMIAHQRHYSS-EEFNGRFNIFKANMDYINEWNTKGSETVLGLNVFADITNEEYRATYLGTPFDASSLEMTPSEKVFGGVQANSVDWRAKGAVTPIKNQGECGGCWSFSATGA 144          
BLAST of CX290985 vs. ExPASy Swiss-Prot
Match: CYSP1_MAIZE (Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.172e-15
Identity = 46/122 (37.70%), Postives = 65/122 (53.28%), Query Frame = 3
Query:  159 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTK----GNHK---LTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGS 503
            F  F +R+GK Y+  +E   R + F  NL   R       S   G+ KF+D +  EF+R  LG  ++  A  +      H+   L  D LP+  DWR+ G V PVK+QG CGSCW+FS +G+
Sbjct:   48 FLSFVQRFGKSYKDADEHAYRLSVFKDNLRRARRHQLLDPSAEHGVTKFSDLTPAEFRRTYLGLRKSRRALLRELGESAHEAPVLPTDGLPDDFDWRDHGAVGPVKNQGSCGSCWSFSASGA 169          
BLAST of CX290985 vs. ExPASy Swiss-Prot
Match: CYSP7_DICDI (Cysteine proteinase 7 OS=Dictyostelium discoideum GN=cprG PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 2.837e-15
Identity = 45/126 (35.71%), Postives = 65/126 (51.59%), Query Frame = 3
Query:  126 QVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGS 503
            Q + +  +  +F  +   + + Y S EE   R+  F  N+D +   N KG    LGLN FAD S EE++   LG   + S+          D   +  DWR  G V+P+K+QG CG CW+FSTTG+
Sbjct:   19 QQLSEVEYRNAFTNWMIAHQRHYSS-EEFNGRYNIFKANMDYVNEWNTKGSETVLGLNVFADISNEEYRATYLGTPFDASSLEMTESDKIFDASAQV-DWRTQGAVTPIKNQGQCGGCWSFSTTGA 142          
BLAST of CX290985 vs. ExPASy Swiss-Prot
Match: CYSP2_HOMAM (Digestive cysteine proteinase 2 OS=Homarus americanus GN=LCP2 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 2.837e-15
Identity = 54/139 (38.85%), Postives = 69/139 (49.64%), Query Frame = 3
Query:  111 ETSVLQVIGQARHALS--FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRK----GLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNH--KLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGS 503
            + +VL + G A  A S  +  F  +YG+ Y   EE   R   F +N   I   N+K     +++ L +NKF D + EEF     G     SA     +  K T     E  DWR  G V+PVKDQG CGSCW FSTTGS
Sbjct:    2 KVAVLFLCGVALAAASPSWEHFKGKYGRQYVDAEEDSYRRVIFEQNQKYIEEFNKKYENGEVTFNLAMNKFGDMTLEEFNAVMKGNIPRRSAPVSVFYPKKETGPQATEV-DWRTKGAVTPVKDQGQCGSCWAFSTTGS 139          
BLAST of CX290985 vs. ExPASy Swiss-Prot
Match: PAPA4_CARPA (Papaya proteinase 4 OS=Carica papaya PE=1 SV=3)

HSP 1 Score: 80.4925 bits (197), Expect = 4.840e-15
Identity = 44/118 (37.29%), Postives = 66/118 (55.93%), Query Frame = 3
Query:  159 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAA-QNCSATTKGNHKLTADV--LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGS 503
            F  +  ++ K Y++V+E   RF  F  NL  I   N+    Y LGLN+F+D S +EF+   +G+  ++ +        +  D+  LPE+ DWR  G V+PVK QG+C SCW FST  +
Sbjct:   48 FNSWMLKHNKNYKNVDEKLYRFEIFKDNLKYIDERNKMINGYWLGLNEFSDLSNDEFKEKYVGSLPEDYTNQPYDEEFVNEDIVDLPESVDWRAKGAVTPVKHQGYCESCWAFSTVAT 165          
BLAST of CX290985 vs. ExPASy Swiss-Prot
Match: CYSP1_HOMAM (Digestive cysteine proteinase 1 OS=Homarus americanus GN=LCP1 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 4.840e-15
Identity = 48/129 (37.21%), Postives = 66/129 (51.16%), Query Frame = 3
Query:  156 SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRK----GLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHK--------LTADVLPETK--DWRESGIVSPVKDQGHCGSCWTFSTTG 500
            S+  F  ++G+ Y  +EE + R   F  NL  I   N+K     ++Y L +N+F+D + E+F           +A  KG  K         + D  PE+   DWR  G V+PVKDQG CGSCW FSTTG
Sbjct:   19 SWEEFKGKFGRKYVDLEEERYRLNVFLDNLQYIEEFNKKYERGEVTYNLAINQFSDMTNEKF-----------NAVMKGYKKGPRPAAVFTSTDAAPESTEVDWRTKGAVTPVKDQGQCGSCWAFSTTG 136          
BLAST of CX290985 vs. ExPASy Swiss-Prot
Match: CPR2_ARATH (Probable cysteine proteinase At3g43960 OS=Arabidopsis thaliana GN=At3g43960 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.840e-15
Identity = 48/112 (42.86%), Postives = 59/112 (52.68%), Query Frame = 3
Query:  183 GKIYESVEEMKLRFATFSKNLDLIRSTNRK-GLSYRLGLNKFADWSWEEFQRHRLGAA---QNCSATTKGNHKLTADVLPETKDWRESGIVSP-VKDQGHCGSCWTFSTTGS 503
            GK Y  + E + RF  F  NL  I   N     SY  GLNKF+D + +EFQ   LG     ++ S   +       DVLP+  DWRE G V P VK QG CGSCW F+ TG+
Sbjct:   49 GKNYNGLGEKERRFKIFKDNLKRIEEHNSDPNRSYERGLNKFSDLTADEFQASYLGGKMEKKSLSDVAERYQYKEGDVLPDEVDWRERGAVVPRVKRQGECGSCWAFAATGA 160          
The following BLAST results are available for this feature:
BLAST of CX290985 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
CYSP3_DICDI7.466e-1639.10Cysteine proteinase 3 OS=Dictyostelium discoideum ... [more]
CFAD_DICDI7.466e-1639.50Counting factor associated protein D OS=Dictyostel... [more]
ORYA_ORYSJ9.752e-1639.83Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
CYSP6_DICDI1.663e-1536.22Cysteine proteinase 6 OS=Dictyostelium discoideum ... [more]
CYSP1_MAIZE2.172e-1537.70Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=... [more]
CYSP7_DICDI2.837e-1535.71Cysteine proteinase 7 OS=Dictyostelium discoideum ... [more]
CYSP2_HOMAM2.837e-1538.85Digestive cysteine proteinase 2 OS=Homarus america... [more]
PAPA4_CARPA4.840e-1537.29Papaya proteinase 4 OS=Carica papaya PE=1 SV=3[more]
CYSP1_HOMAM4.840e-1537.21Digestive cysteine proteinase 1 OS=Homarus america... [more]
CPR2_ARATH4.840e-1542.86Probable cysteine proteinase At3g43960 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionC03002E08Rv OF1 Citrus clementina cDNA clone C03002E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290985 ID=CX290985; Name=CX290985; organism=Citrus clementina; type=EST; length=505bp
TGGTCTCGTCCATCATCTTGTTGCTTTGCTGCGCTGCCGCAGCATCAGCA
TCAAGCTTCGACGACTCCAATCCGATCAGATTGGTATCATCGGACGGTCT
CCGTGACTTCGAGACCTCCGTCCTCCAGGTGATCGGCCAAGCCCGCCATG
CTCTCTCCTTTGCCCGTTTTGCTCGCAGGTATGGAAAGATTTACGAGTCC
GTTGAGGAGATGAAGCTCCGGTTCGCGACTTTCTCCAAGAACTTGGATTT
AATCAGATCTACGAATCGTAAAGGCCTATCTTACAGGCTCGGGTTGAACA
AGTTTGCTGATTGGAGCTGGGAAGAGTTCCAAAGGCACAGGTTGGGAGCT
GCACAAAACTGCTCTGCCACTACAAAAGGAAATCACAAGCTTACTGCTGA
TGTGCTTCCAGAAACGAAAGACTGGAGGGAATCTGGCATAGTAAGCCCAG
TTAAAGACCAAGGTCACTGTGGATCTTGCTGGACTTTCAGCACGACTGGA
TCTCT
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