CX291018
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291018 vs. ExPASy Swiss-Prot
Match: ERF3A_HUMAN (Eukaryotic peptide chain release factor GTP-binding subunit ERF3A OS=Homo sapiens GN=GSPT1 PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 6.276e-35 Identity = 69/141 (48.94%), Postives = 95/141 (67.38%), Query Frame = 2 Query: 2 YKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDE 424 Y G +DKR +E++E+EA E N+ ++ +W LD + ER++G T+++ FET K + T++DAPGH+ F+ NMI G SQAD AVL+I + G FE G K GQTREHA+LA T GVK +I NKMD T +S RY+E Sbjct: 96 YLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEE 236
BLAST of CX291018 vs. ExPASy Swiss-Prot
Match: EF1A_METLZ (Elongation factor 1-alpha OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=tuf PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 6.276e-35 Identity = 71/141 (50.35%), Postives = 97/141 (68.79%), Query Frame = 2 Query: 2 YKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDE 424 ++ G + + +++ ++KEA K +F++AWV+D LK ERERGITIDIA KFET KY TV+D PGHRDF+KNMITG SQAD A++++ T G E QT+EH L+ TLG+ Q+I NKMDA YS+ +Y+E Sbjct: 29 FETGVVQQHILDGYKKEAESKGKATFEFAWVMDSLKEERERGITIDIAHKKFETPKYNFTVVDCPGHRDFVKNMITGASQADAAIIVVSGTEGPME-------QTKEHVFLSKTLGINQIIVAINKMDAV--NYSEEKYNE 160
BLAST of CX291018 vs. ExPASy Swiss-Prot
Match: EF1A_ARCFU (Elongation factor 1-alpha OS=Archaeoglobus fulgidus GN=tuf PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 8.197e-35 Identity = 73/140 (52.14%), Postives = 93/140 (66.43%), Query Frame = 2 Query: 2 YKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYD 421 Y+ G I + +IE+ KEA E K +F++AWV+D+LK ERERG+TID+A KF+T KYY T++D PGHRDFIKNMITG SQAD AVL++D QTREH LA TLG+ Q+I NKMD Y + Y+ Sbjct: 29 YETGEIPEHIIEKMRKEAQEKGKATFEFAWVMDRLKEERERGVTIDVAHRKFQTDKYYITIVDCPGHRDFIKNMITGASQADAAVLVMDVVE-------KVQPQTREHIFLARTLGINQIIVAINKMDRV--NYDQKEYE 159
BLAST of CX291018 vs. ExPASy Swiss-Prot
Match: EF1A_UNCMA (Elongation factor 1-alpha OS=Uncultured methanogenic archaeon RC-I GN=tuf PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 1.071e-34 Identity = 71/142 (50.00%), Postives = 97/142 (68.31%), Query Frame = 2 Query: 2 YKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI 427 ++ G + +IE+++KEA K +F++AWV+D LK ERERGITIDIA +F+T KYY TV+D PGHRDF+KNMITG SQAD A+L+ + G + QT+EH L+ TLG+ Q+I NKMDA Y + RY+E+ Sbjct: 29 FETGAVPAHIIEQYKKEAESKGKGTFEFAWVMDSLKEERERGITIDIAHRRFDTEKYYFTVVDCPGHRDFVKNMITGASQADAAILVCAAPDGVMQ-------QTKEHIFLSKTLGINQLIIAVNKMDAI--NYDQKRYNEV 161
BLAST of CX291018 vs. ExPASy Swiss-Prot
Match: EF1A_PYRFU (Elongation factor 1-alpha OS=Pyrococcus furiosus GN=tuf PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 1.826e-34 Identity = 77/142 (54.23%), Postives = 99/142 (69.72%), Query Frame = 2 Query: 2 YKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI 427 Y G I +++I++FE E E K SFK+AWV+D+LK ERERGITID+A KFET Y T+IDAPGHRDF+KNMITG SQAD AVL++ +T G QT+EHA LA TLG+K +I NKMD Y++ R++E+ Sbjct: 29 YDTGNIPEQIIKKFE-EMGEKGK-SFKFAWVMDRLKEERERGITIDVAHTKFETPHRYITIIDAPGHRDFVKNMITGASQADAAVLVVAATDGVMP-------QTKEHAFLARTLGIKHIIVAINKMDMV--NYNQKRFEEV 159
BLAST of CX291018 vs. ExPASy Swiss-Prot
Match: EF1A_PYRWO (Elongation factor 1-alpha OS=Pyrococcus woesei GN=tuf PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 4.068e-34 Identity = 76/142 (53.52%), Postives = 99/142 (69.72%), Query Frame = 2 Query: 2 YKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI 427 Y G I +++I++FE E E K SFK+AWV+D+L+ ERERGITID+A KFET Y T+IDAPGHRDF+KNMITG SQAD AVL++ +T G QT+EHA LA TLG+K +I NKMD Y++ R++E+ Sbjct: 31 YDTGNIPEQIIKKFE-EMGEKGK-SFKFAWVMDRLREERERGITIDVAHTKFETPHRYITIIDAPGHRDFVKNMITGASQADAAVLVVAATDGVMP-------QTKEHAFLARTLGIKHIIVAINKMDMV--NYNQKRFEEV 161
BLAST of CX291018 vs. ExPASy Swiss-Prot
Match: EF1A_PYRCJ (Elongation factor 1-alpha OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=tuf PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 5.313e-34 Identity = 66/142 (46.48%), Postives = 92/142 (64.79%), Query Frame = 2 Query: 2 YKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI 427 Y+ G +D++ + E+ A +M K F +AW+LD+ K ERERG+TI+ FET K + T+ID PGHRDF+KNMI G SQAD A+ +I + G FE I GQ REH L TLG++Q++ NKMDA Y + RY+++ Sbjct: 39 YETGYVDEKAFKEIEEMAKKMGKEDFAFAWILDRFKEERERGVTIEATHVGFETQKLFITIIDLPGHRDFVKNMIVGASQADAALFVISARPGEFETAIGPQGQGREHLFLIRTLGIQQLVVAVNKMDAV--NYDQKRYEQV 178
BLAST of CX291018 vs. ExPASy Swiss-Prot
Match: ERF3B_MOUSE (Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Mus musculus GN=Gspt2 PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 6.939e-34 Identity = 67/138 (48.55%), Postives = 94/138 (68.12%), Query Frame = 2 Query: 11 GGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDE 424 G +D+R +E++E+EA E N+ ++ +W LD + ER++G T+++ FET K + T++DAPGH+ F+ NMI G SQAD AVL+I + G FE G K GQTREHA+LA T GVK +I NKMD T +S RY+E Sbjct: 232 GMVDRRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKYLIVLINKMDDPTVDWSSERYEE 369
BLAST of CX291018 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAE (Elongation factor 1-alpha OS=Pyrobaculum aerophilum GN=tuf PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 6.939e-34 Identity = 66/142 (46.48%), Postives = 93/142 (65.49%), Query Frame = 2 Query: 2 YKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI 427 Y+ G +D++ ++ E+ A ++ K F +AW+LD+ K ERERG+TI+ FET K + T+ID PGHRDF+KNMI G SQAD A+ +I + G FEA I GQ REH L TLGV+Q++ NKMD Y + RY+++ Sbjct: 39 YETGYVDEKALKEIEEMAKKIGKEDFAFAWILDRFKEERERGVTIEATHVGFETNKLFITIIDLPGHRDFVKNMIVGASQADAALFVISARPGEFEAAIGPQGQGREHLFLIRTLGVQQIVVAVNKMDVV--NYDQKRYEQV 178
BLAST of CX291018 vs. ExPASy Swiss-Prot
Match: ERF3B_PONAB (Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Pongo abelii GN=GSPT2 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 9.063e-34 Identity = 67/138 (48.55%), Postives = 94/138 (68.12%), Query Frame = 2 Query: 11 GGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDE 424 G +DKR +E++E+EA E N+ ++ +W LD + ER++G T+++ FET + + T++DAPGH+ F+ NMI G SQAD AVL+I + G FE G K GQTREHA+LA T GVK +I NKMD T +S RY+E Sbjct: 228 GMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETERKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSIERYEE 365 The following BLAST results are available for this feature:
BLAST of CX291018 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291018 ID=CX291018; Name=CX291018; organism=Citrus clementina; type=EST; length=433bpback to top |