CX291022
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_FLAAU (Glycine cleavage system H protein, mitochondrial (Fragment) OS=Flaveria australasica GN=GDCSH PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 2.091e-37 Identity = 71/104 (68.27%), Postives = 89/104 (85.58%), Query Frame = 3 Query: 12 LKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGE 323 LKYA+SHEWVK +G+ ATIGITDHAQDHLG+VV+VELPEVG +V + FGAVESVKATSDVNSP+SG++VEVN +L+ +P L+N SPY+DGW+IKV+ + E Sbjct: 40 LKYANSHEWVKHEGSVATIGITDHAQDHLGEVVFVELPEVGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLTKTPGLINKSPYEDGWMIKVKPSNPSE 143
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_CARHZ (Glycine cleavage system H protein OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=gcvH PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 3.566e-37 Identity = 74/123 (60.16%), Postives = 89/123 (72.36%), Query Frame = 3 Query: 6 KDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEE 374 KDLKY+ HEW+KVDGN IGITD AQ LGD+V++ELP VG + G SFG VESVKA SD+ +PVSGKVVEVNEE+ SP LVN PY GW+IKVE+ + EL +L+ + Y K EEE Sbjct: 6 KDLKYSREHEWIKVDGNIGIIGITDFAQKSLGDIVFIELPGVGDEISAGDSFGVVESVKAASDLYAPVSGKVVEVNEEVIESPQLVNEDPYGKGWMIKVEISNEAELDELLSPEDYEKLLEEE 128
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_BREBN (Glycine cleavage system H protein OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=gcvH PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 1.355e-36 Identity = 71/122 (58.20%), Postives = 92/122 (75.41%), Query Frame = 3 Query: 6 KDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEE 371 K+L+Y++ HEWV+V+GN A IGIT AQ LGD+V+VELPEVG T++Q FG+VESVK S++ +PV+GKVVEVN EL +P LVNSSPY+ W+I VE+ EL KLMDAD+Y +E Sbjct: 5 KNLRYSEEHEWVRVEGNKAYIGITSFAQAELGDIVFVELPEVGATIQQDEPFGSVESVKTVSELYAPVTGKVVEVNGELEDAPELVNSSPYEQAWMIVVELSDTAELDKLMDADKYEAMVKE 126
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_ALCBS (Glycine cleavage system H protein OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=gcvH PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.957e-35 Identity = 69/122 (56.56%), Postives = 87/122 (71.31%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEE 374 +L+YA SHEW KV+ AT+GI+DHAQD +GD+VYVELPEVG V G G VESVKA SD+ SPVSG++VE+NE L P LVN+ PY+ GW+ KV++ GEL L+ ADQY + E Sbjct: 7 ELRYASSHEWAKVEDGVATVGISDHAQDAMGDLVYVELPEVGQVVAAGDETGVVESVKAASDIYSPVSGEIVEINEALEDEPELVNNVPYEGGWLFKVQLTDEGELDSLLTADQYQAQIDSE 128
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_STAS1 (Glycine cleavage system H protein OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=gcvH PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 4.359e-35 Identity = 66/121 (54.55%), Postives = 92/121 (76.03%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEE 371 +LKY+ HEWVKV+GN+ TIGIT++AQ LGD+V+VELPEV + +G +FG+VESVK S++ +PVSGKV+E NEEL SP VN SPY+ W++KVE+ +L++LM A+QY++ E Sbjct: 6 ELKYSKEHEWVKVEGNTVTIGITEYAQGELGDIVFVELPEVDDEINEGDTFGSVESVKTVSELYAPVSGKVLESNEELEDSPEFVNESPYEKAWMVKVELSDESQLEELMSAEQYSEMIGE 126
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_SYMTH (Glycine cleavage system H protein OS=Symbiobacterium thermophilum GN=gcvH PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 5.693e-35 Identity = 69/121 (57.02%), Postives = 86/121 (71.07%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEE 371 DLKY+ HEW++V+GN +GIT AQD LGDVV+VELPEVG +KQ FG VESVK SD+ P SGKVVEVN +L SSP L+N PY +GWI+K+E+ + EL L+DA Y F +E Sbjct: 7 DLKYSKEHEWIRVEGNIGIVGITWFAQDQLGDVVFVELPEVGRELKQNEQFGVVESVKTVSDLYCPASGKVVEVNTKLESSPELINQDPYGEGWILKLELSNPAELDNLLDAAAYDAFTKE 127
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_STAHJ (Glycine cleavage system H protein OS=Staphylococcus haemolyticus (strain JCSC1435) GN=gcvH PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 7.436e-35 Identity = 67/121 (55.37%), Postives = 89/121 (73.55%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEE 371 +LKY+ HEWVKV+GN+ TIGIT++AQ LGD+V+VELPEV + +G +FG+VESVK S++ +PVSGKVVE NEEL SP VN SPY+ W++KVE+ +L L+ ADQY + E Sbjct: 6 ELKYSKEHEWVKVEGNTVTIGITEYAQGELGDIVFVELPEVDDEINEGDTFGSVESVKTVSELYAPVSGKVVESNEELEDSPEFVNESPYEKAWMVKVELSDESQLDDLLSADQYKEMIGE 126
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_STAAB (Glycine cleavage system H protein OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=gcvH PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 9.711e-35 Identity = 65/121 (53.72%), Postives = 92/121 (76.03%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEE 371 +LKY++ HEWVKV+GN ATIGIT++AQ LGD+V+VELPE + +G +FG+VESVK S++ +P+SGKVVEVNEEL SP VN SPY+ W++KVE+ +L+ L+ A++Y++ E Sbjct: 6 ELKYSNEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQLEALLTAEKYSEMIGE 126
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_VIBHB (Glycine cleavage system H protein OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=gcvH PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.268e-34 Identity = 69/124 (55.65%), Postives = 93/124 (75.00%), Query Frame = 3 Query: 6 KDLKYADSHEWVKVDGN-SATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEE 374 K LK+ DSHEWV+ +G+ +ATIGI++HAQ+ LGDVV+V+LP+V V+ G SF VESVKA SD+ SP++G+VVE+NEEL SP L+N PY+ GWI+KV++ EL L DA++Y EEE Sbjct: 3 KTLKFTDSHEWVRDNGDGTATIGISEHAQEMLGDVVFVDLPDVEDEVEAGESFSLVESVKAASDIYSPITGEVVEINEELEDSPELINEEPYEGGWIVKVKLSDPSELDDLKDAEEYLSSIEEE 126
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_BACHK (Glycine cleavage system H protein OS=Bacillus thuringiensis subsp. konkukian GN=gcvH PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.268e-34 Identity = 64/122 (52.46%), Postives = 91/122 (74.59%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEE 374 +L+Y++ HEWVK +GN IGIT AQ+ LGD+V+VELPEVG T++ FG+VESVK S++ +PVSGKVV VNEELS P LVN SPY+ W++KVE+ A +++KL+ A++Y + ++ Sbjct: 6 NLRYSEEHEWVKTEGNEVVIGITHFAQNELGDIVFVELPEVGATIEADEPFGSVESVKTVSELYAPVSGKVVAVNEELSDQPELVNESPYEGAWMVKVELSDASQVEKLLTAEKYAEMTNQD 127 The following BLAST results are available for this feature:
BLAST of CX291022 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 462
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX291022 ID=CX291022; Name=CX291022; organism=Citrus clementina; type=EST; length=389bpback to top |