CX291022
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_MYCBO (Glycine cleavage system H protein OS=Mycobacterium bovis GN=gcvH PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 6.309e-26 Identity = 56/122 (45.90%), Postives = 79/122 (64.75%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDGNSAT-IGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSA------GELKKLMDADQY 353 DL Y HEW++ G+ +GITD+AQ LGDVV+V+LP +G V G +FG VES K+ SD+ +P+SGKV VN +L +P LVNS PY GW++ +++DS+ L L+DA+ Y Sbjct: 7 DLHYTAEHEWIRRSGDDTVRVGITDYAQSALGDVVFVQLPVIGTAVTAGETFGEVESTKSVSDLYAPISGKVSAVNSDLDGTPQLVNSDPYGAGWLLDIQVDSSDVAALESALTTLLDAEAY 128
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_PYRHO (Probable glycine cleavage system H protein OS=Pyrococcus horikoshii GN=gcvH PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 8.240e-26 Identity = 61/119 (51.26%), Postives = 81/119 (68.07%), Query Frame = 3 Query: 12 LKYADSHEWVKV-DGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVE-MDSAGELKKLMDADQYTKF 362 L Y HEW +V + + +GITD+AQ LGD+ YVELPEVG V +G VESVKA S+V +PVSG+V+EVNEELS SP +N PY WI K++ + ELK+LMDA++Y ++ Sbjct: 17 LYYTKDHEWAQVLEDGTVLVGITDYAQKELGDLAYVELPEVGKEVSKGDVLCEVESVKAVSEVYAPVSGEVIEVNEELSDSPEKINEDPY-GAWIAKIKPKNLEEELKELMDAEKYAEY 134
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_DINSH (Glycine cleavage system H protein OS=Dinoroseobacter shibae (strain DFL 12) GN=gcvH PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 8.240e-26 Identity = 51/112 (45.54%), Postives = 77/112 (68.75%), Query Frame = 3 Query: 18 YADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQY 353 Y D HEW++V+ ++ATIGIT HA + LG+VV++EL G T +G G VESVKA SD+ +PV+G+++E N L +PA +N P + W+ K+++ GEL +L+DA+ Y Sbjct: 6 YTDDHEWIEVEDDTATIGITKHAAEQLGEVVFIELQPEGETFVKGDEIGVVESVKAASDIFAPVTGEILEANAALVETPAELNEDPEGNSWLYKIKLSDPGELSELLDAEGY 117
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_CORJK (Glycine cleavage system H protein OS=Corynebacterium jeikeium (strain K411) GN=gcvH PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 8.240e-26 Identity = 57/119 (47.90%), Postives = 80/119 (67.23%), Query Frame = 3 Query: 9 DLKYADSHEWVK----VDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQY 353 D Y++ HEWV V+G + +GIT A + LGD+V+VELPEVG V+ G +FG VES K+ SD+ +PVSG+VV VNE L + L+N PY +GW+ +V++ AGE LM+A+ Y Sbjct: 7 DFLYSEEHEWVNTSAVVEGETVRVGITHIAAEALGDIVFVELPEVGSEVEAGEAFGEVESTKSVSDIYAPVSGEVVAVNEALEDNAGLINEDPYGEGWLYEVKVTEAGE---LMEAEAY 122
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_PROMA (Glycine cleavage system H protein OS=Prochlorococcus marinus GN=gcvH PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.076e-25 Identity = 50/118 (42.37%), Postives = 84/118 (71.19%), Query Frame = 3 Query: 6 KDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTK 359 K ++ADSHE+ +G+ IGI+ A D LGD+V+V+LP +G ++QG SFG+VESVKA D+N+P+ G+V+++NE + +SP + + P+ +GW++ V+ A +L KLM ++ Y++ Sbjct: 7 KKFRFADSHEYACPEGDLVRIGISAFAVDQLGDIVFVDLPGIGTLLEQGISFGSVESVKAVEDMNAPIGGEVLQINESVLNSPEELQNDPHGEGWLLLVKPSDASQLDKLMSSEIYSE 124
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_KOCRD (Glycine cleavage system H protein OS=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) GN=gcvH PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.076e-25 Identity = 54/122 (44.26%), Postives = 81/122 (66.39%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDGNSAT--IGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCE 368 +L Y HEWV+ +T +GITDHAQ LG+VV+V+LPEVG TV G G +ES K+ SD+ +PV+G++V VN+EL+ +P L+N +PY+ GW+ V ++S +L+DA Y + + Sbjct: 7 ELAYTAEHEWVQDLSEDSTFKVGITDHAQSELGEVVFVQLPEVGDTVTAGDVVGEIESTKSVSDLFAPVTGEIVSVNDELADNPGLLNEAPYEAGWLFTVRVESQDATAQLLDAQAYQQLLD 128
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_BRAJA (Glycine cleavage system H protein OS=Bradyrhizobium japonicum GN=gcvH PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.076e-25 Identity = 53/112 (47.32%), Postives = 76/112 (67.86%), Query Frame = 3 Query: 18 YADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQY 353 Y HEW+ ++G+ AT+GITD+AQ LGDVV++ELP++G +K+ + VESVKA SDV +PV+G+V+E N+ L++ PALVNS W K+++ EL LMD Y Sbjct: 6 YTSDHEWLAIEGDVATVGITDYAQSQLGDVVFIELPKLGRALKKAEAAAVVESVKAASDVYAPVTGEVLETNDALAAEPALVNSDAQGKAWFFKIKIADKSELGGLMDEAAY 117
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_BART1 (Glycine cleavage system H protein OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=gcvH PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.076e-25 Identity = 50/112 (44.64%), Postives = 76/112 (67.86%), Query Frame = 3 Query: 18 YADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQY 353 + HEW+ VDG T+G+T +AQ+ LGD+V+V+LP+ G + +G + VESVKA SDV SP+ G+VVE+NE L+ +P LVN +GW+ K+ + +L++L+D D Y Sbjct: 6 FTQDHEWLSVDGQMVTVGVTHYAQEQLGDLVFVDLPQSGTKLSKGEAAAVVESVKAASDVYSPLDGEVVEINEALTDNPELVNQKAETEGWLWKMTLQDETQLEELLDEDAY 117
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_NEIG1 (Glycine cleavage system H protein OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=gcvH PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.406e-25 Identity = 54/116 (46.55%), Postives = 78/116 (67.24%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDGNSA-TIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQY 353 +LKY SHEW++++ + T+GIT HAQ+ LGD+V+VELPEVG + G VESVKA SDV +P++G+VV VN++L +P NS PY GW K++ + + L+ A+QY Sbjct: 8 ELKYVASHEWLRLEEDGTITVGITHHAQELLGDIVFVELPEVGANLAAEEQSGVVESVKAASDVYAPIAGEVVAVNDDLPGAPETANSDPYGAGWFFKIKPANPADYDGLLTAEQY 123
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_MYCVP (Glycine cleavage system H protein OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=gcvH PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.406e-25 Identity = 56/119 (47.06%), Postives = 80/119 (67.23%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDGNSAT-IGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDS---AGELKKLMDADQY 353 DL Y HEWV+ G+ +GITD+AQ LGDVV+V+LP+VG V G SFG VES K+ SD+ +PV+ KV+ VN +L +P LVNS PY +GW+++++ ++ L L+DA+ Y Sbjct: 7 DLSYTTEHEWVQRTGDGTVRVGITDYAQSALGDVVFVQLPDVGSDVTAGESFGEVESTKSVSDLYAPVTAKVIAVNGDLEGNPQLVNSDPYGEGWLVELQTETESMQAGLASLLDAEGY 125 The following BLAST results are available for this feature:
BLAST of CX291022 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 462
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291022 ID=CX291022; Name=CX291022; organism=Citrus clementina; type=EST; length=389bpback to top |