CX291022
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_ACICJ (Glycine cleavage system H protein OS=Acidiphilium cryptum (strain JF-5) GN=gcvH PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.398e-25 Identity = 53/118 (44.92%), Postives = 73/118 (61.86%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKF 362 + +++ HEWV++DG+ AT+GITDHAQ LGDVV+VELPE G V G + VESVKA SDV +P++G V E N L+ P +VN+ W ++ +D L+ AD Y F Sbjct: 3 ETRFSKDHEWVRLDGDVATVGITDHAQSALGDVVFVELPETGRHVDAGEACAVVESVKAASDVYAPLAGTVTEANGALADDPGMVNAQAESGAWFFRMTLDDRAAFDALLTADDYQAF 120
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_STRGG (Glycine cleavage system H protein OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=gcvH PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.131e-25 Identity = 56/120 (46.67%), Postives = 83/120 (69.17%), Query Frame = 3 Query: 6 KDLKYADSHEWVK-VDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKF 362 + L+Y+ HEW+ ++ ATIGIT++A + LGDVVY +LPEVG TV G + G +ES K+ SD+ SPV+G+V N+++ P+LVNS+P++ GW+ KV + A E L+ AD+YT F Sbjct: 5 QQLRYSKEHEWLSALEDGVATIGITEYAANALGDVVYAQLPEVGDTVTAGETCGELESTKSVSDLYSPVTGEVTAANQDVVDDPSLVNSAPFEGGWLFKVRV--AEEPADLLSADEYTAF 122
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_NITEU (Glycine cleavage system H protein OS=Nitrosomonas europaea GN=gcvH PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.131e-25 Identity = 55/123 (44.72%), Postives = 83/123 (67.48%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDGN-SATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEE 374 +LKY +SHEWV+++ + S T+GIT HAQ+ LGD+V+V+LP+VG + Q VESVKA SD+ +P+ G+V+ VN E+ +SP +N Y W+ K++ +AGE+ L+DA Y K + E Sbjct: 6 ELKYTESHEWVRLEADGSVTVGITQHAQELLGDMVFVQLPDVGRALAQREDCAVVESVKAASDIYAPLGGEVIAVNSEVETSPEKINEDCYA-AWLFKLKPANAGEVDGLLDAGGYQKLLDSE 127
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_MYCS2 (Glycine cleavage system H protein OS=Mycobacterium smegmatis GN=gcvH PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.090e-25 Identity = 59/120 (49.17%), Postives = 80/120 (66.67%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDGNSAT-IGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKK----LMDADQY 353 DL Y HEWV G+ +GITD+AQ LGDVV+V+LP+VG V G +FG VES K+ SD+ +PV+ KVV VN +L SP LVNS PY +GW++ + ++ AG L + L+DA+ Y Sbjct: 7 DLYYTSEHEWVLRTGDDTVRVGITDYAQSALGDVVFVQLPDVGADVASGDAFGEVESTKSVSDLYAPVTAKVVAVNGDLEGSPELVNSDPYGEGWLVDLRVE-AGTLDEALGGLLDAEGY 125
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_CHLP8 (Glycine cleavage system H protein OS=Chlorobaculum parvum (strain NCIB 8327) GN=gcvH PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.090e-25 Identity = 54/123 (43.90%), Postives = 83/123 (67.48%), Query Frame = 3 Query: 9 DLKYADSHEWVKV--DGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEE 371 +L+Y HEW+++ DG +A +GITD AQ LGD+V+VE VG V +FG VE+VK +D+ +PV+G++VEVN L + A+VNS PY +GWI+K+++D+A E++ L+ Y+ E Sbjct: 6 NLRYTKDHEWLQLLDDGVTAVVGITDFAQSELGDIVFVETKPVGTKVAAHGAFGTVEAVKTVADLFAPVAGEIVEVNGALDDA-AIVNSDPYNEGWIVKMKLDNAAEVESLLSPADYSALIGE 127
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_CHLL2 (Glycine cleavage system H protein OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=gcvH PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.090e-25 Identity = 53/123 (43.09%), Postives = 81/123 (65.85%), Query Frame = 3 Query: 9 DLKYADSHEWVKV--DGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEE 371 DL+Y HEW+K+ DG++A +GITD AQ LGD+V+VEL G +K FG VE+VK +D+ +PV+G+++EVN L ++ +VN PY +GW++K+ +D L +L+DA Y + E Sbjct: 6 DLRYTKDHEWIKLLEDGSAALVGITDFAQSELGDIVFVELKPAGTKLKAHEVFGTVEAVKTVADLFAPVAGEIMEVNGSLDAA-EVVNQDPYGEGWLVKIRIDDPASLAELLDAAAYRELIGE 127
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_THEFY (Glycine cleavage system H protein OS=Thermobifida fusca (strain YX) GN=gcvH PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.341e-25 Identity = 58/122 (47.54%), Postives = 77/122 (63.11%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEE 374 +L Y HEWV ++ AT+GIT A + LGD+VYVE PEVG TV G S G +ES K+ S++ SPV G+VV+VN+ P L+ S PY GW+ KVE+ A E L+ +QYT+ E E Sbjct: 6 ELGYTKEHEWVAINEGIATVGITAFAAEALGDIVYVEPPEVGSTVTAGESCGEIESHKSVSELYSPVDGEVVDVNQAAVDDPELIGSDPYGRGWLFKVEL--AEEPADLLTPEQYTQLTEGE 125
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_RHILO (Glycine cleavage system H protein OS=Rhizobium loti GN=gcvH PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.341e-25 Identity = 54/112 (48.21%), Postives = 75/112 (66.96%), Query Frame = 3 Query: 18 YADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQY 353 + HEW++V+G AT+GITD+AQ+ LGD+V+VELPE G + +G + VESVKA SDV +PV G++ E N LSS P+LVNS+ GW+ K+ + +L LMD Y Sbjct: 9 FTSDHEWLRVEGGIATVGITDYAQEQLGDLVFVELPETGKKLTKGDTAVVVESVKAASDVYAPVDGEITEANGTLSSDPSLVNSAATGAGWLWKMRLADESQLAGLMDEAAY 120
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_THICR (Glycine cleavage system H protein OS=Thiomicrospira crunogena (strain XCL-2) GN=gcvH PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 6.976e-25 Identity = 57/115 (49.57%), Postives = 72/115 (62.61%), Query Frame = 3 Query: 12 LKYADSHEWVKVDGNS-ATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQY 353 LKYADSHEWV +D A +GITD AQ+ LGD++ V LPEVG + QG ++ESVKA SD+ SP+SG+VV VN EL P VN PY GW+ K+ E+ L+ Y Sbjct: 8 LKYADSHEWVYLDEEGHAVVGITDFAQESLGDLMDVHLPEVGADIDQGEEIMSLESVKAASDIFSPLSGEVVAVNTELEDEPERVNDEPYDGGWLFKLAPHDLSEMDDLLSDVDY 122
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_THEVO (Probable glycine cleavage system H protein OS=Thermoplasma volcanium GN=gcvH PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 6.976e-25 Identity = 54/119 (45.38%), Postives = 78/119 (65.55%), Query Frame = 3 Query: 12 LKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCE 368 LKY +HEW KVD AT+GITD+AQ + D+VYV+LPEVG K G +ESVK+ DV SP++G++ EVN+EL+ P +N PY W++K++++ GE + A+QY K + Sbjct: 8 LKYTKTHEWYKVDNGIATVGITDYAQSQMTDIVYVDLPEVGDKKKVGDVLLTIESVKSAEDVYSPLTGEITEVNQELTKHPENINKDPY-GNWLVKMKVEKEGE---YLTAEQYRKLIQ 122 The following BLAST results are available for this feature:
BLAST of CX291022 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 462
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291022 ID=CX291022; Name=CX291022; organism=Citrus clementina; type=EST; length=389bpback to top |