CX291022
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_STAEQ (Glycine cleavage system H protein OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=gcvH PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 4.820e-34 Identity = 62/121 (51.24%), Postives = 91/121 (75.21%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEE 371 + KY+ HEWVK++ N ATIGIT++AQ+ LGD+V+VELPE + +G +FG+VESVK S++ +P+SGK+VEVNEEL SP VN SPY+ W++K+E+ +L++L+ ADQY++ E Sbjct: 6 EFKYSKEHEWVKIENNVATIGITEYAQNELGDIVFVELPETDDELNEGDTFGSVESVKTVSELYAPISGKIVEVNEELEDSPEFVNESPYEKAWMVKIEISDDSQLEELLSADQYSEMIGE 126
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_STAES (Glycine cleavage system H protein OS=Staphylococcus epidermidis (strain ATCC 12228) GN=gcvH PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 6.295e-34 Identity = 61/121 (50.41%), Postives = 91/121 (75.21%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEE 371 + KY+ HEWVK++ N AT+GIT++AQ+ LGD+V+VELPE + +G +FG+VESVK S++ +P+SGK+VEVNEEL SP VN SPY+ W++K+E+ +L++L+ ADQY++ E Sbjct: 6 EFKYSKEHEWVKIENNVATVGITEYAQNELGDIVFVELPETDDELNEGDTFGSVESVKTVSELYAPISGKIVEVNEELEDSPEFVNESPYEKAWMVKIEISDDSQLEELLSADQYSEMIGE 126
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_AERHH (Glycine cleavage system H protein OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=gcvH PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 8.221e-34 Identity = 67/123 (54.47%), Postives = 89/123 (72.36%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDGNS-ATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEE 374 +LKYA SHEW++V+ N A +GIT+HAQ+ LGD+V+V+LPEVG V G ESVKA SD+ SPVSG+++ VNEEL SP LVNS PY GW+ ++++D AGEL L+DA+ Y +EE Sbjct: 7 ELKYATSHEWIRVEANGEAVVGITEHAQELLGDMVFVDLPEVGKQVGAGDDCAVAESVKAASDIYSPVSGEILAVNEELEGSPELVNSDPYGAGWLFRIKLDDAGELANLLDAEGYQNVVDEE 129
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_VIBCM (Glycine cleavage system H protein OS=Vibrio cholerae serotype O1 (strain M66-2) GN=gcvH PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.074e-33 Identity = 67/124 (54.03%), Postives = 91/124 (73.39%), Query Frame = 3 Query: 6 KDLKYADSHEWVKVDGN-SATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEE 374 K LK+ +SHEWV+ +G+ + TIGI++HAQ+ LGDVV+VELPE+ + G SF VESVKA SD+ +PV+G V+EVNE+L +SP L+N PY GWI+KV+M ELK L DA++Y EE+ Sbjct: 3 KTLKFTESHEWVRDNGDGTVTIGISEHAQEMLGDVVFVELPEIDAEIDAGDSFSLVESVKAASDIYAPVTGVVIEVNEDLQNSPELINEEPYDGGWIVKVKMSDPDELKDLKDAEEYLASIEED 126
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_VIBCH (Glycine cleavage system H protein OS=Vibrio cholerae GN=gcvH PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.074e-33 Identity = 67/124 (54.03%), Postives = 91/124 (73.39%), Query Frame = 3 Query: 6 KDLKYADSHEWVKVDGN-SATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEE 374 K LK+ +SHEWV+ +G+ + TIGI++HAQ+ LGDVV+VELPE+ + G SF VESVKA SD+ +PV+G V+EVNE+L +SP L+N PY GWI+KV+M ELK L DA++Y EE+ Sbjct: 3 KTLKFTESHEWVRDNGDGTVTIGISEHAQEMLGDVVFVELPEIDAEIDAGDSFSLVESVKAASDIYAPVTGVVIEVNEDLQNSPELINEEPYDGGWIVKVKMSDPDELKDLKDAEEYLASIEED 126
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_VIBC3 (Glycine cleavage system H protein OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=gcvH PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.074e-33 Identity = 67/124 (54.03%), Postives = 91/124 (73.39%), Query Frame = 3 Query: 6 KDLKYADSHEWVKVDGN-SATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEE 374 K LK+ +SHEWV+ +G+ + TIGI++HAQ+ LGDVV+VELPE+ + G SF VESVKA SD+ +PV+G V+EVNE+L +SP L+N PY GWI+KV+M ELK L DA++Y EE+ Sbjct: 3 KTLKFTESHEWVRDNGDGTVTIGISEHAQEMLGDVVFVELPEIDAEIDAGDSFSLVESVKAASDIYAPVTGVVIEVNEDLQNSPELINEEPYDGGWIVKVKMSDPDELKDLKDAEEYLASIEED 126
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_STAAT (Glycine cleavage system H protein OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=gcvH PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 1.402e-33 Identity = 63/121 (52.07%), Postives = 90/121 (74.38%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEE 371 +LKY+ HEWVKV+GN A IGIT++AQ LGD+V+VELPE + +G +FG+VESVK S++ +P+SGKVVEVNEEL SP VN SPY+ W++KVE+ +++ L+ A++Y++ E Sbjct: 6 ELKYSKEHEWVKVEGNVAIIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQIEALLTAEKYSEMIGE 126
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_STAAE (Glycine cleavage system H protein OS=Staphylococcus aureus (strain Newman) GN=gcvH PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 1.402e-33 Identity = 63/121 (52.07%), Postives = 90/121 (74.38%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEE 371 +LKY+ HEWVKV+GN A IGIT++AQ LGD+V+VELPE + +G +FG+VESVK S++ +P+SGKVVEVNEEL SP VN SPY+ W++KVE+ +++ L+ A++Y++ E Sbjct: 6 ELKYSKEHEWVKVEGNVAIIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQIEALLTAEKYSEMIGE 126
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_STAAC (Glycine cleavage system H protein OS=Staphylococcus aureus (strain COL) GN=gcvH PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 1.402e-33 Identity = 63/121 (52.07%), Postives = 90/121 (74.38%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEE 371 +LKY+ HEWVKV+GN A IGIT++AQ LGD+V+VELPE + +G +FG+VESVK S++ +P+SGKVVEVNEEL SP VN SPY+ W++KVE+ +++ L+ A++Y++ E Sbjct: 6 ELKYSKEHEWVKVEGNVAIIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQIEALLTAEKYSEMIGE 126
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_STAA8 (Glycine cleavage system H protein OS=Staphylococcus aureus (strain NCTC 8325) GN=gcvH PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 1.402e-33 Identity = 63/121 (52.07%), Postives = 90/121 (74.38%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEE 371 +LKY+ HEWVKV+GN A IGIT++AQ LGD+V+VELPE + +G +FG+VESVK S++ +P+SGKVVEVNEEL SP VN SPY+ W++KVE+ +++ L+ A++Y++ E Sbjct: 6 ELKYSKEHEWVKVEGNVAIIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQIEALLTAEKYSEMIGE 126 The following BLAST results are available for this feature:
BLAST of CX291022 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 462
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291022 ID=CX291022; Name=CX291022; organism=Citrus clementina; type=EST; length=389bpback to top |