CX291022
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_STAA3 (Glycine cleavage system H protein OS=Staphylococcus aureus (strain USA300) GN=gcvH PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 1.402e-33 Identity = 63/121 (52.07%), Postives = 90/121 (74.38%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEE 371 +LKY+ HEWVKV+GN A IGIT++AQ LGD+V+VELPE + +G +FG+VESVK S++ +P+SGKVVEVNEEL SP VN SPY+ W++KVE+ +++ L+ A++Y++ E Sbjct: 6 ELKYSKEHEWVKVEGNVAIIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQIEALLTAEKYSEMIGE 126
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_LISMO (Glycine cleavage system H protein OS=Listeria monocytogenes GN=gcvH PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 1.402e-33 Identity = 67/118 (56.78%), Postives = 83/118 (70.34%), Query Frame = 3 Query: 6 KDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTK 359 KDL Y + HEWVK D S IGITD AQD LGD+V+VELPEVG TV +G S G++ESVK SD +PV+GKVV VNE L P L+NS+PY GWI+K+E ++K L+ +D Y K Sbjct: 5 KDLLYTEEHEWVKADDGSYVIGITDFAQDQLGDIVFVELPEVGDTVTKGDSIGSIESVKTVSDFYAPVTGKVVAVNETLEDEPELINSNPYDTGWILKLEEVEEADVKALLSSDDYEK 122
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_LISMH (Glycine cleavage system H protein OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=gcvH PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 1.402e-33 Identity = 67/118 (56.78%), Postives = 83/118 (70.34%), Query Frame = 3 Query: 6 KDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTK 359 KDL Y + HEWVK D S IGITD AQD LGD+V+VELPEVG TV +G S G++ESVK SD +PV+GKVV VNE L P L+NS+PY GWI+K+E ++K L+ +D Y K Sbjct: 5 KDLLYTEEHEWVKADDGSYVIGITDFAQDQLGDIVFVELPEVGDTVTKGDSIGSIESVKTVSDFYAPVTGKVVAVNETLEDEPELINSNPYDTGWILKLEEVEEADVKALLSSDDYEK 122
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_STRM5 (Glycine cleavage system H protein OS=Stenotrophomonas maltophilia (strain R551-3) GN=gcvH PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.831e-33 Identity = 69/124 (55.65%), Postives = 84/124 (67.74%), Query Frame = 3 Query: 9 DLKYADSHEWVKVDGNS-ATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEED 377 DLK+ SHEW +V+GN T+GI+DHAQ LGD+VYVELPEVG T K VESVKA SDV SPVSG +VEVN LS P +N Y DGW+ VE+ +A EL +L+D D Y + E+ED Sbjct: 7 DLKFLKSHEWARVEGNGRVTVGISDHAQGLLGDLVYVELPEVGATAKANEQIAVVESVKAASDVYSPVSGTIVEVNSALSDKPETINEDAYGDGWMYVVELSNAEELNELLDPDAYAEALEDED 130
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_SCHPO (Putative glycine cleavage system H protein, mitochondrial OS=Schizosaccharomyces pombe GN=SPBP19A11.01 PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.831e-33 Identity = 66/123 (53.66%), Postives = 87/123 (70.73%), Query Frame = 3 Query: 18 YADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEEDSKH 386 + HEWVKVDG+ T+GIT +A + LG+VV+VELPE TV G GAVESVK+ SDV SPVSG V +NE L SP V+SSP ++GWI K+++ S ELK L++ + Y +FC+EED+ H Sbjct: 47 FTKEHEWVKVDGDVGTVGITSYAANALGEVVFVELPEPETTVSVGDGIGAVESVKSASDVYSPVSGTVTSINESLGDSPDKVSSSPEEEGWICKIKLSSPDELKSLLNDESYAQFCKEEDASH 169
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_LISMF (Glycine cleavage system H protein OS=Listeria monocytogenes serotype 4b (strain F2365) GN=gcvH PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.831e-33 Identity = 67/118 (56.78%), Postives = 83/118 (70.34%), Query Frame = 3 Query: 6 KDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTK 359 KDL Y + HEWVK D S IGITD AQD LGD+V+VELPEVG TV +G S G++ESVK SD +PV+GKVV VNE L P L+NS+PY GWI+K+E ++K L+ +D Y K Sbjct: 5 KDLLYTEEHEWVKADEGSYVIGITDFAQDQLGDIVFVELPEVGDTVAKGDSIGSIESVKTVSDFYAPVTGKVVAVNETLEDEPELINSNPYDTGWILKLEEVEEADVKALLSSDDYEK 122
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_LISMC (Glycine cleavage system H protein OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=gcvH PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.831e-33 Identity = 67/118 (56.78%), Postives = 83/118 (70.34%), Query Frame = 3 Query: 6 KDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTK 359 KDL Y + HEWVK D S IGITD AQD LGD+V+VELPEVG TV +G S G++ESVK SD +PV+GKVV VNE L P L+NS+PY GWI+K+E ++K L+ +D Y K Sbjct: 5 KDLLYTEEHEWVKADEGSYVIGITDFAQDQLGDIVFVELPEVGDTVAKGDSIGSIESVKTVSDFYAPVTGKVVAVNETLEDEPELINSNPYDTGWILKLEEVEEADVKALLSSDDYEK 122
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_CELJU (Glycine cleavage system H protein OS=Cellvibrio japonicus (strain Ueda107) GN=gcvH PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.831e-33 Identity = 71/125 (56.80%), Postives = 86/125 (68.80%), Query Frame = 3 Query: 6 KDLKYADSHEWVKVDGN-SATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEED 377 K+LKY SHEW +V+ + + TIGITDHAQD LGDVVYVE PEVG V G G VESVKA SD+ S VSGKVV VNE L +P VNSSPY +GW +V+ D EL + + AD+Y + E E+ Sbjct: 6 KELKYLSSHEWARVEEDGTVTIGITDHAQDALGDVVYVETPEVGSRVSLGEEAGVVESVKAASDIYSLVSGKVVAVNELLQDAPETVNSSPYDEGWFFRVQPDDVSELDEALSADEYRELLESEE 130
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_BACLD (Glycine cleavage system H protein OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=gcvH PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.831e-33 Identity = 65/123 (52.85%), Postives = 87/123 (70.73%), Query Frame = 3 Query: 6 KDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEE 374 K+L+Y++ HEWVK +G+ IGITD AQ LGD+V+VELPEVG +K FG+VESVK S++ +P++GKVVEVNE+L SP VN SPY+ W+I VE A E++ LM A QY +E+ Sbjct: 5 KELRYSEEHEWVKTEGDKVRIGITDFAQSELGDIVFVELPEVGDEIKADEPFGSVESVKTVSELYAPINGKVVEVNEDLEDSPEFVNESPYEKAWMIVVEPSDASEIENLMTAGQYEDMIKED 127
BLAST of CX291022 vs. ExPASy Swiss-Prot
Match: GCSH_ANASK (Glycine cleavage system H protein OS=Anaeromyxobacter sp. (strain K) GN=gcvH PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.831e-33 Identity = 64/124 (51.61%), Postives = 88/124 (70.97%), Query Frame = 3 Query: 6 KDLKYADSHEWVKVDGNSATIGITDHAQDHLGDVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYKDGWIIKVEMDSAGELKKLMDADQYTKFCEEED 377 +DL+Y HEW + G++ +GITD AQ LGDVVYVELP+VG VK+G SFG VES KA S++ +P+SGKV+EVN+ LS +P +N PY++GW+I +E +L+ LMDA Y F EE++ Sbjct: 5 EDLRYTREHEWARRKGSAIVVGITDFAQQQLGDVVYVELPDVGDPVKKGESFGVVESTKAVSELFAPISGKVIEVNDPLSDAPETINEDPYEEGWMITIEPSDPKDLEALMDAAAYKAFVEEQE 128 The following BLAST results are available for this feature:
BLAST of CX291022 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 462
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291022 ID=CX291022; Name=CX291022; organism=Citrus clementina; type=EST; length=389bpback to top |