CX291023

Overview
NameCX291023
Unique NameCX291023
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length606
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12075 contig Ccv1_Contig12075:55..660. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_ENTFA (Chaperone protein dnaJ OS=Enterococcus faecalis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.473e-12
Identity = 34/68 (50.00%), Postives = 47/68 (69.12%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAG 453
            +RD YEVLG+++  +D EIK AYRK++ KYHPD N  +  A + FKE + +Y +LSDP K+  YD  G
Sbjct:    4 KRDYYEVLGLAKGASDDEIKKAYRKLSKKYHPDIN-KEADAEEKFKEVSEAYEVLSDPQKKAAYDQYG 70          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_CYAP4 (Chaperone protein dnaJ OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.473e-12
Identity = 39/102 (38.24%), Postives = 57/102 (55.88%), Query Frame = 1
Query:  247 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAVXXXXXXXXXXXXXXGAVNTMFAALFSKLG 552
            + RD Y++LGVSR+   +++K AYR++A KYHPD N  +  A + FKE   +Y +LSDP+ R +YD  G EA               G    +F ++FS  G
Sbjct:    1 MARDYYDILGVSRDAGQEDLKQAYRRLARKYHPDVN-KEAGAEERFKEINRAYEVLSDPETRARYDRFG-EAGVSGAAAGYGDMGDMGGFADIFESIFSGFG 100          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_COLMA (Chaperone protein dnaJ OS=Colwellia maris GN=dnaJ PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 4.473e-12
Identity = 33/71 (46.48%), Postives = 46/71 (64.79%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEA 462
            +RD YE L VS++ +++EIK AY+K+A+KYHPD+   D    + FKE   +Y IL+D  KR  YD  G  A
Sbjct:    3 KRDYYETLEVSQDASEKEIKKAYKKLAMKYHPDRTQGDKSKEETFKEVKEAYEILNDDQKRAAYDQYGHAA 73          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_BIFLO (Chaperone protein dnaJ OS=Bifidobacterium longum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.473e-12
Identity = 35/64 (54.69%), Postives = 43/64 (67.19%), Query Frame = 1
Query:  256 DPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDT 447
            D YE LGV R  +D EIK AYRK++ KYHPD     P   D FKE   +Y++LS+PDKRR YD+
Sbjct:    3 DYYETLGVERGASDDEIKKAYRKLSRKYHPD--IAGPEFEDKFKEVNNAYDVLSNPDKRRMYDS 64          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_ANAPZ (Chaperone protein dnaJ OS=Anaplasma phagocytophilum (strain HZ) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.473e-12
Identity = 31/69 (44.93%), Postives = 47/69 (68.12%), Query Frame = 1
Query:  256 DPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEA 462
            D Y++LGVSR  +++EIK +YRK   +YHPD+N  +  A + FK+ + +Y++L+D DKR  YD  G  A
Sbjct:    5 DYYDLLGVSRGASEEEIKKSYRKKVFEYHPDRNPGNKEAEEKFKKISEAYDVLTDSDKRAAYDRYGHSA 73          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ2_MYCLE (Chaperone protein dnaJ 2 OS=Mycobacterium leprae GN=dnaJ2 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.473e-12
Identity = 35/69 (50.72%), Postives = 47/69 (68.12%), Query Frame = 1
Query:  247 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAG 453
            + RD Y +LGVSRN +D +IK AYRK+A + HPD N ++   A  FKE + +Y +LSDP+KRR  D  G
Sbjct:    1 MARDYYGLLGVSRNASDADIKRAYRKLARELHPDINPDEAAQAK-FKEISMAYEVLSDPEKRRIVDLGG 68          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: CSP_TORCA (Cysteine string protein OS=Torpedo californica PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.473e-12
Identity = 39/85 (45.88%), Postives = 55/85 (64.71%), Query Frame = 1
Query:  199 MPAQRSKSERSDAGKQLRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAG 453
            M  QR +S  S +G  L    Y VLG+ +N + ++IK +YRK+ALKYHPDKN ++P A++ FKE   ++ IL+D  KR  YD  G
Sbjct:    1 MGDQRQRS-LSTSGDSL----YIVLGLDKNASPEDIKKSYRKLALKYHPDKNPDNPEASEKFKEINNAHAILTDATKRNIYDKYG 80          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_TRIEI (Chaperone protein dnaJ OS=Trichodesmium erythraeum (strain IMS101) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.842e-12
Identity = 33/69 (47.83%), Postives = 48/69 (69.57%), Query Frame = 1
Query:  247 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAG 453
            + RD YE+LGVSR+   +E+K AYR++A KYHPD N  +P + + FKE   +Y ILSDP+ + ++D  G
Sbjct:    1 MARDYYEILGVSRSADKEELKRAYRRLARKYHPDVN-KEPGSEERFKEINRAYEILSDPEMKARFDRFG 68          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_TETHA (Chaperone protein dnaJ OS=Tetragenococcus halophilus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.842e-12
Identity = 36/68 (52.94%), Postives = 44/68 (64.71%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAG 453
            +RD YEVLGV +  +D EIK AYRK++ KYHPD N  +  A + FK+F    N LSDP KR  YD  G
Sbjct:    4 KRDYYEVLGVDKGASDDEIKKAYRKLSKKYHPDVN-QEADAEEKFKKFQKPMNTLSDPQKRAAYDQYG 70          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_STAES (Chaperone protein dnaJ OS=Staphylococcus epidermidis (strain ATCC 12228) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.842e-12
Identity = 37/97 (38.14%), Postives = 54/97 (55.67%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAVXXXXXXXXXXXXXXGAVNTMFAALF 540
            +RD YEVLGV+++ +  EIK AYRK++ KYHPD N  +  A + FKE + +Y +LSD +KR  YD  G +                G    +F++ F
Sbjct:    3 KRDYYEVLGVNKSASKDEIKKAYRKLSKKYHPDINKEEG-ADEKFKEISEAYEVLSDENKRANYDQFGHDGPQGGFGSQGFGGSDFGGFEDIFSSFF 98          
The following BLAST results are available for this feature:
BLAST of CX291023 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_ENTFA4.473e-1250.00Chaperone protein dnaJ OS=Enterococcus faecalis GN... [more]
DNAJ_CYAP44.473e-1238.24Chaperone protein dnaJ OS=Cyanothece sp. (strain P... [more]
DNAJ_COLMA4.473e-1246.48Chaperone protein dnaJ OS=Colwellia maris GN=dnaJ ... [more]
DNAJ_BIFLO4.473e-1254.69Chaperone protein dnaJ OS=Bifidobacterium longum G... [more]
DNAJ_ANAPZ4.473e-1244.93Chaperone protein dnaJ OS=Anaplasma phagocytophilu... [more]
DNAJ2_MYCLE4.473e-1250.72Chaperone protein dnaJ 2 OS=Mycobacterium leprae G... [more]
CSP_TORCA4.473e-1245.88Cysteine string protein OS=Torpedo californica PE=... [more]
DNAJ_TRIEI5.842e-1247.83Chaperone protein dnaJ OS=Trichodesmium erythraeum... [more]
DNAJ_TETHA5.842e-1252.94Chaperone protein dnaJ OS=Tetragenococcus halophil... [more]
DNAJ_STAES5.842e-1238.14Chaperone protein dnaJ OS=Staphylococcus epidermid... [more]

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Properties
Property NameValue
Genbank descriptionC03003A10SK OF2 Citrus clementina cDNA clone C03003A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291023 ID=CX291023; Name=CX291023; organism=Citrus clementina; type=EST; length=606bp
ATCAAGTCTAGTCTAGGGTTTCCTTATTCTTTTCTCACCAGTCTGTTATT
TTTCCGAGAAAAGATTAAGAAAAAAAAATGCGAGAGAATTTGGGAGGAAC
AATTGTTTGTTTTTCGTTTTCGTCTAAAAAAAATTTTCTGTCTCGGTAGT
GGTTTCTAGGGCCTTTGAGTGGAGTTTTTTCACGTTCTTTTATTGAAAAT
GCCGGCTCAACGATCCAAGTCCGAGAGAAGCGATGCGGGAAAGCAGCTCC
GGCGGGACCCCTACGAGGTTCTCGGCGTCTCCAGGAACTGTACGGATCAA
GAAATCAAGAGCGCCTACAGGAAAATGGCTCTAAAGTACCATCCTGATAA
GAATGCAAATGACCCTGTAGCAGCTGATATTTTTAAGGAGTTTACATTTT
CCTATAATATCTTGTCAGATCCTGACAAAAGACGACAGTATGACACCGCT
GGTTTTGAGGCTGTTGAATCAGAAAGTCAAGAATTGGAGCTAGATCTTTC
TAGTTTGGGAGCTGTGAACACCATGTTTGCTGCACTTTTTAGTAAACTTG
GTGTGCCAATCAAGACCACTGTATCGGCTACTGTCTTGGAGGAGGCACTT
AATGGC
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