CX291023

Overview
NameCX291023
Unique NameCX291023
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length606
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12075 contig Ccv1_Contig12075:55..660. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_METTE (Chaperone protein dnaJ OS=Methanosarcina thermophila GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.486e-15
Identity = 38/71 (53.52%), Postives = 53/71 (74.65%), Query Frame = 1
Query:  253 RDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            RD YE+LG+SR+ T ++IK +YRK+ALKYHPD+N  +P A + FKE + +Y +LSDP+KR QYD  G   +
Sbjct:    5 RDYYEILGLSRDATPEDIKKSYRKLALKYHPDRN-KEPGAEEKFKEISEAYAVLSDPEKRAQYDRFGHAGI 74          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_METSS (Chaperone protein dnaJ OS=Methylovorus sp. (strain SS1 / DSM 11726) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.486e-15
Identity = 37/72 (51.39%), Postives = 52/72 (72.22%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            ++D YEVLGV+R+ +D+EIK +YRK+A+KYHPD+N ++P A + FKE   +Y +LSD  KR  YD  G   V
Sbjct:    3 KKDYYEVLGVNRDASDEEIKKSYRKLAMKYHPDRNPDNPKAEESFKEAKEAYEVLSDEQKRAAYDQYGHAGV 74          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_HAHCH (Chaperone protein dnaJ OS=Hahella chejuensis (strain KCTC 2396) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.486e-15
Identity = 38/72 (52.78%), Postives = 51/72 (70.83%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            +RD YEVLGVSR+   +E+K AYR++A+KYHPD+N  D  A ++FKE T +Y++LSD  KR  YD  G   V
Sbjct:    3 KRDYYEVLGVSRDVDGKEVKKAYRRLAMKYHPDRNPGDASAEEMFKEATEAYDVLSDDQKRAAYDQFGHAGV 74          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_DESHY (Chaperone protein dnaJ OS=Desulfitobacterium hafniense (strain Y51) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.486e-15
Identity = 39/72 (54.17%), Postives = 52/72 (72.22%), Query Frame = 1
Query:  247 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEA 462
            ++RD YEVLGVS++  +QEIK AYRK+A +YHPD N  D  A + FKE T +Y++LSD +KR +YD  G  A
Sbjct:    1 MKRDYYEVLGVSKSADEQEIKKAYRKLARQYHPDVNPGDKDAEEKFKEATEAYDVLSDTEKRARYDQMGHSA 72          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_DESHD (Chaperone protein dnaJ OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.486e-15
Identity = 39/72 (54.17%), Postives = 52/72 (72.22%), Query Frame = 1
Query:  247 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEA 462
            ++RD YEVLGVS++  +QEIK AYRK+A +YHPD N  D  A + FKE T +Y++LSD +KR +YD  G  A
Sbjct:    1 MKRDYYEVLGVSKSADEQEIKKAYRKLARQYHPDVNPGDKDAEEKFKEATEAYDVLSDTEKRARYDQMGHSA 72          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_XANCP (Chaperone protein dnaJ OS=Xanthomonas campestris pv. campestris GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.940e-15
Identity = 38/71 (53.52%), Postives = 49/71 (69.01%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEA 462
            +RD YEVLGV+R  +D+E+K AYR+ A+KYHPD+N  D  A   FKE   +Y +LSD +KRR YD  G  A
Sbjct:    3 KRDYYEVLGVARGASDEELKKAYRRCAMKYHPDRNPGDAAAEATFKECKEAYEVLSDGNKRRAYDAHGHAA 73          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_XANCB (Chaperone protein dnaJ OS=Xanthomonas campestris pv. campestris (strain B100) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.940e-15
Identity = 38/71 (53.52%), Postives = 49/71 (69.01%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEA 462
            +RD YEVLGV+R  +D+E+K AYR+ A+KYHPD+N  D  A   FKE   +Y +LSD +KRR YD  G  A
Sbjct:    3 KRDYYEVLGVARGASDEELKKAYRRCAMKYHPDRNPGDAAAEATFKECKEAYEVLSDGNKRRAYDAHGHAA 73          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_XANC8 (Chaperone protein dnaJ OS=Xanthomonas campestris pv. campestris (strain 8004) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.940e-15
Identity = 38/71 (53.52%), Postives = 49/71 (69.01%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEA 462
            +RD YEVLGV+R  +D+E+K AYR+ A+KYHPD+N  D  A   FKE   +Y +LSD +KRR YD  G  A
Sbjct:    3 KRDYYEVLGVARGASDEELKKAYRRCAMKYHPDRNPGDAAAEATFKECKEAYEVLSDGNKRRAYDAHGHAA 73          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_PELUB (Chaperone protein dnaJ OS=Pelagibacter ubique GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.940e-15
Identity = 37/71 (52.11%), Postives = 52/71 (73.24%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEA 462
            +RD Y+VLGVS++ + +E+KSAYRK+A+KYHPDKN  D  + D FKE   +Y +LSD +K++ YD  G  A
Sbjct:    3 KRDFYDVLGVSKSASPEELKSAYRKLAVKYHPDKNPGDKASEDKFKEAGEAYGVLSDKEKKQNYDNFGHAA 73          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_JANMA (Chaperone protein dnaJ OS=Janthinobacterium sp. (strain Marseille) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.940e-15
Identity = 41/101 (40.59%), Postives = 57/101 (56.44%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAVXXXXXXXXXXXXXXGAVNTMFAALFSKLG 552
            +RD YE+LGV ++ +D+EIK AYRK+A+K+HPD+N +   A D FKE   +Y +LSDP KR  YD  G   V               A   +F  +F + G
Sbjct:    3 KRDFYEILGVGKSASDEEIKKAYRKLAMKHHPDRNPDSKGAEDKFKEAKEAYEMLSDPQKRDAYDRYGHAGVDPNMGGGGGGGGFADAFGDIFGDIFGQAG 103          
The following BLAST results are available for this feature:
BLAST of CX291023 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_METTE1.486e-1553.52Chaperone protein dnaJ OS=Methanosarcina thermophi... [more]
DNAJ_METSS1.486e-1551.39Chaperone protein dnaJ OS=Methylovorus sp. (strain... [more]
DNAJ_HAHCH1.486e-1552.78Chaperone protein dnaJ OS=Hahella chejuensis (stra... [more]
DNAJ_DESHY1.486e-1554.17Chaperone protein dnaJ OS=Desulfitobacterium hafni... [more]
DNAJ_DESHD1.486e-1554.17Chaperone protein dnaJ OS=Desulfitobacterium hafni... [more]
DNAJ_XANCP1.940e-1553.52Chaperone protein dnaJ OS=Xanthomonas campestris p... [more]
DNAJ_XANCB1.940e-1553.52Chaperone protein dnaJ OS=Xanthomonas campestris p... [more]
DNAJ_XANC81.940e-1553.52Chaperone protein dnaJ OS=Xanthomonas campestris p... [more]
DNAJ_PELUB1.940e-1552.11Chaperone protein dnaJ OS=Pelagibacter ubique GN=d... [more]
DNAJ_JANMA1.940e-1540.59Chaperone protein dnaJ OS=Janthinobacterium sp. (s... [more]

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Properties
Property NameValue
Genbank descriptionC03003A10SK OF2 Citrus clementina cDNA clone C03003A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291023 ID=CX291023; Name=CX291023; organism=Citrus clementina; type=EST; length=606bp
ATCAAGTCTAGTCTAGGGTTTCCTTATTCTTTTCTCACCAGTCTGTTATT
TTTCCGAGAAAAGATTAAGAAAAAAAAATGCGAGAGAATTTGGGAGGAAC
AATTGTTTGTTTTTCGTTTTCGTCTAAAAAAAATTTTCTGTCTCGGTAGT
GGTTTCTAGGGCCTTTGAGTGGAGTTTTTTCACGTTCTTTTATTGAAAAT
GCCGGCTCAACGATCCAAGTCCGAGAGAAGCGATGCGGGAAAGCAGCTCC
GGCGGGACCCCTACGAGGTTCTCGGCGTCTCCAGGAACTGTACGGATCAA
GAAATCAAGAGCGCCTACAGGAAAATGGCTCTAAAGTACCATCCTGATAA
GAATGCAAATGACCCTGTAGCAGCTGATATTTTTAAGGAGTTTACATTTT
CCTATAATATCTTGTCAGATCCTGACAAAAGACGACAGTATGACACCGCT
GGTTTTGAGGCTGTTGAATCAGAAAGTCAAGAATTGGAGCTAGATCTTTC
TAGTTTGGGAGCTGTGAACACCATGTTTGCTGCACTTTTTAGTAAACTTG
GTGTGCCAATCAAGACCACTGTATCGGCTACTGTCTTGGAGGAGGCACTT
AATGGC
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