CX291023

Overview
NameCX291023
Unique NameCX291023
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length606
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12075 contig Ccv1_Contig12075:55..660. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_CALS8 (Chaperone protein dnaJ OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.940e-15
Identity = 37/71 (52.11%), Postives = 50/71 (70.42%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEA 462
            ++D YE+LGV RN T +EIK AYR++A +YHPD N  +  A + FKE   +Y +LSDP+KRR+YD  G  A
Sbjct:    4 KKDYYEILGVPRNATQEEIKRAYRRLAKQYHPDANPGNKEAEEKFKEINEAYEVLSDPEKRRKYDQFGHAA 74          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_ALHEH (Chaperone protein dnaJ OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.940e-15
Identity = 40/72 (55.56%), Postives = 47/72 (65.28%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            + D YE LGV+RN +D EIK AYR+MA+KYHPD+N  D  A   FKE   +Y ILSDP KR  YD  G   V
Sbjct:    3 KSDYYEALGVARNASDSEIKKAYRRMAMKYHPDRNPGDKEAEARFKEAKEAYEILSDPQKRAAYDQFGHAGV 74          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_VIBVY (Chaperone protein dnaJ OS=Vibrio vulnificus (strain YJ016) GN=dnaJ PE=3 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 2.534e-15
Identity = 37/71 (52.11%), Postives = 52/71 (73.24%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEA 462
            +RD YEVLGVSR+ ++++IK AY+++A+K+HPD+N  D  AAD FKE   +Y IL+DP K+  YD  G  A
Sbjct:    3 KRDFYEVLGVSRDASERDIKKAYKRLAMKFHPDRNQGDESAADKFKEVKEAYEILTDPQKKAAYDQYGHAA 73          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_VIBVU (Chaperone protein dnaJ OS=Vibrio vulnificus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.534e-15
Identity = 37/71 (52.11%), Postives = 52/71 (73.24%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEA 462
            +RD YEVLGVSR+ ++++IK AY+++A+K+HPD+N  D  AAD FKE   +Y IL+DP K+  YD  G  A
Sbjct:    3 KRDFYEVLGVSRDASERDIKKAYKRLAMKFHPDRNQGDESAADKFKEVKEAYEILTDPQKKAAYDQYGHAA 73          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_STRMK (Chaperone protein dnaJ OS=Stenotrophomonas maltophilia (strain K279a) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.534e-15
Identity = 38/71 (53.52%), Postives = 49/71 (69.01%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEA 462
            +RD YEVLGV+R  TD E+K AYR+ A+K+HPD+N  D  A   FKE   +Y +LSD +KRR YD+ G  A
Sbjct:    3 KRDYYEVLGVARTATDDELKKAYRRCAMKFHPDRNPGDAAAEASFKECKEAYEVLSDGNKRRMYDSHGHAA 73          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_EHRCJ (Chaperone protein dnaJ OS=Ehrlichia canis (strain Jake) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.534e-15
Identity = 39/71 (54.93%), Postives = 49/71 (69.01%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEA 462
            + D YE+LGVS+N T +EIK AYRKMALKYHPD N  +  A + FKE + +Y++L D DKR  YD  G  A
Sbjct:    3 KSDYYELLGVSKNATSEEIKKAYRKMALKYHPDTNPGNKEAEEKFKELSEAYDVLIDQDKRAAYDKYGHNA 73          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_RALME (Chaperone protein dnaJ OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.309e-15
Identity = 37/72 (51.39%), Postives = 51/72 (70.83%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            +RD YEVLGV +N +D EIK AYRK+A+K+HPD+N ++  A + FKE   +Y +LSDP+K+  YD  G   V
Sbjct:    3 KRDYYEVLGVGKNASDDEIKKAYRKLAMKHHPDRNPDNKEAEEKFKEVKEAYEMLSDPEKKAAYDQYGHAGV 74          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_NITOC (Chaperone protein dnaJ OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.309e-15
Identity = 37/72 (51.39%), Postives = 50/72 (69.44%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            +RD YE LGV+RN +D EIK AYR++A++YHPD+N +D  A + FKE   +Y++LSD  KR  YD  G   V
Sbjct:    3 KRDYYEALGVARNASDAEIKKAYRRLAMRYHPDRNPDDKAAEEHFKEIQEAYDVLSDARKRTAYDQFGHAGV 74          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOD6 (Chaperone protein dnaJ OS=Clostridium difficile (strain 630) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.309e-15
Identity = 37/72 (51.39%), Postives = 49/72 (68.06%), Query Frame = 1
Query:  250 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDTAGFEAV 465
            +RD YEVLG+S+    QEIK AYRK+A+KYHPD+N  D  A + FKE   +Y +LSD  KR+ YD  G + +
Sbjct:    4 KRDYYEVLGISKGAEAQEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEINEAYEVLSDDTKRKTYDQFGHDGL 75          
BLAST of CX291023 vs. ExPASy Swiss-Prot
Match: DNJC7_SCHPO (DnaJ homolog subfamily C member 7 homolog OS=Schizosaccharomyces pombe GN=SPBC543.02c PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.322e-15
Identity = 39/69 (56.52%), Postives = 50/69 (72.46%), Query Frame = 1
Query:  241 KQLRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEFTFSYNILSDPDKRRQYDT 447
            K  R+D Y++LGVS+  TD EIK AYRK+AL YHPDKNA +  A   FKE   +Y ILSDP+ RR++D+
Sbjct:  344 KSKRKDHYKILGVSKEATDIEIKKAYRKLALVYHPDKNAGNLEAEARFKEVGEAYTILSDPESRRRFDS 412          
The following BLAST results are available for this feature:
BLAST of CX291023 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_CALS81.940e-1552.11Chaperone protein dnaJ OS=Caldicellulosiruptor sac... [more]
DNAJ_ALHEH1.940e-1555.56Chaperone protein dnaJ OS=Alkalilimnicola ehrliche... [more]
DNAJ_VIBVY2.534e-1552.11Chaperone protein dnaJ OS=Vibrio vulnificus (strai... [more]
DNAJ_VIBVU2.534e-1552.11Chaperone protein dnaJ OS=Vibrio vulnificus GN=dna... [more]
DNAJ_STRMK2.534e-1553.52Chaperone protein dnaJ OS=Stenotrophomonas maltoph... [more]
DNAJ_EHRCJ2.534e-1554.93Chaperone protein dnaJ OS=Ehrlichia canis (strain ... [more]
DNAJ_RALME3.309e-1551.39Chaperone protein dnaJ OS=Ralstonia metallidurans ... [more]
DNAJ_NITOC3.309e-1551.39Chaperone protein dnaJ OS=Nitrosococcus oceani (st... [more]
DNAJ_CLOD63.309e-1551.39Chaperone protein dnaJ OS=Clostridium difficile (s... [more]
DNJC7_SCHPO4.322e-1556.52DnaJ homolog subfamily C member 7 homolog OS=Schiz... [more]

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Properties
Property NameValue
Genbank descriptionC03003A10SK OF2 Citrus clementina cDNA clone C03003A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291023 ID=CX291023; Name=CX291023; organism=Citrus clementina; type=EST; length=606bp
ATCAAGTCTAGTCTAGGGTTTCCTTATTCTTTTCTCACCAGTCTGTTATT
TTTCCGAGAAAAGATTAAGAAAAAAAAATGCGAGAGAATTTGGGAGGAAC
AATTGTTTGTTTTTCGTTTTCGTCTAAAAAAAATTTTCTGTCTCGGTAGT
GGTTTCTAGGGCCTTTGAGTGGAGTTTTTTCACGTTCTTTTATTGAAAAT
GCCGGCTCAACGATCCAAGTCCGAGAGAAGCGATGCGGGAAAGCAGCTCC
GGCGGGACCCCTACGAGGTTCTCGGCGTCTCCAGGAACTGTACGGATCAA
GAAATCAAGAGCGCCTACAGGAAAATGGCTCTAAAGTACCATCCTGATAA
GAATGCAAATGACCCTGTAGCAGCTGATATTTTTAAGGAGTTTACATTTT
CCTATAATATCTTGTCAGATCCTGACAAAAGACGACAGTATGACACCGCT
GGTTTTGAGGCTGTTGAATCAGAAAGTCAAGAATTGGAGCTAGATCTTTC
TAGTTTGGGAGCTGTGAACACCATGTTTGCTGCACTTTTTAGTAAACTTG
GTGTGCCAATCAAGACCACTGTATCGGCTACTGTCTTGGAGGAGGCACTT
AATGGC
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