CX291025

Overview
NameCX291025
Unique NameCX291025
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length547
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig345 contig Ccv1_Contig345:313..859. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC2_ORYSJ (Laccase-2 OS=Oryza sativa subsp. japonica GN=LAC2 PE=2 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 2.557e-63
Identity = 109/179 (60.89%), Postives = 132/179 (73.74%), Query Frame = 3
Query:   12 YNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYP-CSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            +N+TIHWHG+ Q R+ WADGP  +TQCPI  G SY Y F +  Q GTLWWHAHI+ +RATVHGA +I P +G  YPFPKPD E  IVLGEWW+ D+  V  +G + G+ P +SDA TING+PG L P CSE  TY L+V+ GKTYLLRIINAA+N++LFF IA H  TVV +DA YT P
Sbjct:   79 HNMTIHWHGLKQRRNGWADGPAYVTQCPIGSGGSYVYDFNVTRQRGTLWWHAHIAWMRATVHGAIVILPAAGVPYPFPKPDDEAEIVLGEWWHADVETVERQGSMLGMAPNMSDAHTINGKPGPLVPFCSEKHTYALQVQSGKTYLLRIINAAVNDELFFSIAGHNMTVVEIDATYTKP 257          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC3_ARATH (Laccase-3 OS=Arabidopsis thaliana GN=LAC3 PE=2 SV=2)

HSP 1 Score: 239.58 bits (610), Expect = 7.440e-63
Identity = 104/178 (58.43%), Postives = 133/178 (74.72%), Query Frame = 3
Query:   12 YNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            YNI+IHWHGI Q+R+ WADGP  ITQCPIRPG +YTY+F+I +QEGTLWWHAH   LRATV+GA II P+ G  YPF  P +++PI+LGEWW+ + MDV  + + TG    +SDA+TING+PGDLY CS   T +  +  G+T  LR+INA +N +LFF +ANH+FTVV  D+ YT P
Sbjct:   78 YNISIHWHGIRQLRNPWADGPEYITQCPIRPGQTYTYRFKIEDQEGTLWWHAHSRWLRATVYGALIIYPRLGSPYPFSMPKRDIPILLGEWWDRNPMDVLKQAQFTGAAANVSDAYTINGQPGDLYRCSRAGTIRFPIFPGETVQLRVINAGMNQELFFSVANHQFTVVETDSAYTKP 255          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC6_ORYSJ (Laccase-6 OS=Oryza sativa subsp. japonica GN=LAC6 PE=2 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 9.717e-63
Identity = 107/183 (58.47%), Postives = 135/183 (73.77%), Query Frame = 3
Query:    3 ESPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSE--NQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            +SPYN+T+HWHG+FQ  + WADGP M+TQCPIRPG+ YTY+F +  QEGTLWWHAH S +RATV+GA +IRP+    YPFP P +E  ++LGEWWN D + + ++   TG+    +DA+TING PGD Y C E  N+  K +V + KTYLLRIINAALN   FFK+A H FTVVA DA YT+P
Sbjct:   74 DSPYNVTVHWHGVFQRGTPWADGPAMVTQCPIRPGHRYTYRFAVAGQEGTLWWHAHSSYMRATVYGALVIRPRRAGGYPFPTPYEEKTVLLGEWWNGDPVALESQSFSTGIPAPNADAYTINGMPGDSYLCPETTNRIAKFEVRRDKTYLLRIINAALNTAFFFKVAGHTFTVVAADASYTEP 256          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC25_ORYSJ (Laccase-25 OS=Oryza sativa subsp. japonica GN=LAC25 PE=2 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 9.717e-63
Identity = 106/182 (58.24%), Postives = 135/182 (74.18%), Query Frame = 3
Query:    6 SPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHK-YPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCS-ENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            SPY++T+HWHG+ Q  + WADGP M+TQCP++PG +YTY+F +  QEGTLWWHAH+S  RATV+GA +IRP+ G K YPFPKPDKE  ++LGEWWN  + D+     +TG+    +DA+TING+PGD Y CS  NQT K +V +  TYLLRIINA +N  LFFK+A H+ TVV  DA YT P
Sbjct:   74 SPYSMTLHWHGVLQRGTPWADGPAMVTQCPVQPGGNYTYRFNVDGQEGTLWWHAHVSFHRATVYGALVIRPRGGAKAYPFPKPDKEHVVILGEWWNATVYDMERMAFLTGIPAPHADAYTINGKPGDFYNCSAPNQTAKFEVRQNGTYLLRIINAGMNTPLFFKVAKHRLTVVGADACYTKP 255          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC13_ARATH (Laccase-13 OS=Arabidopsis thaliana GN=LAC13 PE=2 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 9.717e-63
Identity = 111/180 (61.67%), Postives = 135/180 (75.00%), Query Frame = 3
Query:   12 YNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPK-SGHKYPFPK-PDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            YNI++HWHGI Q+R+ WADGP  ITQCPI+PG SYTY+F + +QEGTLWWHAH   LRATV+GA IIRP  S   YPFP  P +E+ ++LGEWW+ + MDV N  + TG  P ISDAFTING+PGDLY CS  +T +  V  G+  LLR+IN+ALN +LFF +ANHK TVVA DA YT P
Sbjct:   74 YNISLHWHGIRQMRNPWADGPEYITQCPIQPGGSYTYRFTMEDQEGTLWWHAHSRWLRATVYGALIIRPPLSSPHYPFPVIPKREITLLLGEWWDRNPMDVLNLAQFTGAAPNISDAFTINGQPGDLYRCSSQETLRFLVGSGEIVLLRVINSALNQELFFGVANHKLTVVAADASYTKP 253          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC9_ORYSJ (Putative laccase-9 OS=Oryza sativa subsp. japonica GN=LAC9 PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 2.165e-62
Identity = 103/177 (58.19%), Postives = 132/177 (74.58%), Query Frame = 3
Query:   15 NITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            NITIHWHG+ Q R+ W+DGP  ITQCPIRPG ++TY+  +  +EGTLWWHAH    RATVHGA +I PK G  +PF KPDKE+P++LGEWWNDDI  V ++ ++ G     S+A TIN +PGD++PCS + T+K+ V++G TYLLRIINA L N +FF IA H+ TVV +DA YT P
Sbjct:   82 NITIHWHGVDQPRNPWSDGPEFITQCPIRPGGNFTYQVILSEEEGTLWWHAHSDFDRATVHGAIVIHPKRGTTFPFKKPDKEIPVILGEWWNDDIEHVLDKAQLLGGDVDPSNANTINAQPGDMFPCSRDDTFKVAVQQGNTYLLRIINAGLTNDMFFAIAGHRLTVVGIDARYTKP 258          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC10_ARATH (Laccase-10 OS=Arabidopsis thaliana GN=LAC10 PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 2.165e-62
Identity = 107/178 (60.11%), Postives = 127/178 (71.35%), Query Frame = 3
Query:   12 YNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            YN++IHWHGI Q+R+ WADGP  ITQCPI+PG+SY Y F +  Q GTLWWHAH+  LRATVHGA +I PK G  YPFPKP +E  I+LGEWW  D   V N    +G+ P +SDA  ING PG +  C     +KL VE GKTY+LR+INAALN +LFFKIA H+FTVV VDA Y  P
Sbjct:   75 YNVSIHWHGIRQLRTGWADGPAYITQCPIKPGHSYVYNFTVTGQRGTLWWHAHVLWLRATVHGAIVILPKLGLPYPFPKPHREEVIILGEWWKSDTETVVNEALKSGLAPNVSDAHVINGHPGFVPNCPSQGNFKLAVESGKTYMLRLINAALNEELFFKIAGHRFTVVEVDAVYVKP 252          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC5_ARATH (Laccase-5 OS=Arabidopsis thaliana GN=LAC5 PE=2 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 4.822e-62
Identity = 105/178 (58.99%), Postives = 130/178 (73.03%), Query Frame = 3
Query:   12 YNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            YNITIHWHG+ Q+R+ WADGP  +TQCPIRPG+SYTY+F I  QEGTLWWHAH S LRATV+G+ ++ P +G  YPF KP + VP++LGEWW+ + +DV      TG  P  SDA+TING+PGDLY CS   T  + +  G+T LLR+IN+ALN  LFF +ANHK TVV  DA Y  P
Sbjct:   79 YNITIHWHGVRQMRTGWADGPEFVTQCPIRPGSSYTYRFTIQGQEGTLWWHAHSSWLRATVYGSLLVFPPAGSSYPFTKPHRNVPLLLGEWWDANPVDVLRESIRTGGAPNNSDAYTINGQPGDLYKCSSQDTTVVPINVGETILLRVINSALNQPLFFTVANHKLTVVGADASYLKP 256          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC22_ORYSJ (Laccase-22 OS=Oryza sativa subsp. japonica GN=LAC22 PE=2 SV=2)

HSP 1 Score: 236.498 bits (602), Expect = 6.298e-62
Identity = 112/179 (62.57%), Postives = 131/179 (73.18%), Query Frame = 3
Query:   12 YNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQT-YKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            +N+TIHWHG+ QIR+ W DGP  ITQCPI+PG+S+ Y F I  Q GTL WHAHI+ LRATVHGA +I PK G  YPFP P KE  IVLGEWW +D   V N+    GVGP ISD+ TING PG L  C+ +Q  +KL VE GKTY+LRIINAALN+ LFFK+A H+ TVV VDA YT P
Sbjct:   81 HNVTIHWHGVRQIRTGWYDGPAYITQCPIQPGSSFLYNFTITGQRGTLLWHAHINWLRATVHGAIVILPKLGVPYPFPAPHKEAVIVLGEWWKEDTETVINQAMQLGVGPNISDSHTINGHPGPLSECASSQDGFKLSVENGKTYMLRIINAALNDDLFFKVAGHELTVVEVDAVYTKP 259          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC14_ARATH (Laccase-14 OS=Arabidopsis thaliana GN=LAC14 PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 8.226e-62
Identity = 103/176 (58.52%), Postives = 132/176 (75.00%), Query Frame = 3
Query:   12 YNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWW-NDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGY 536
            YNIT+HWHG  QIR+ W+DGP  +TQCPIRPG SY Y+  +  +EGT+WWHAH    RATVHGAFI+ PK G  YPFPKP +E+P++LGEWW  ++IM +  +   TG  P ISD++TING+PG LYPCS+ +T+K+ V +G+ YLLRIINA ++ +LFF IANH  TVVA D  Y
Sbjct:   86 YNITLHWHGARQIRNPWSDGPEYVTQCPIRPGESYVYRIDLKVEEGTIWWHAHSQWARATVHGAFIVYPKRGSSYPFPKPHREIPLILGEWWKKENIMHIPGKANKTGGEPAISDSYTINGQPGYLYPCSKPETFKITVVRGRRYLLRIINAVMDEELFFAIANHTLTVVAKDGFY 261          
The following BLAST results are available for this feature:
BLAST of CX291025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
LAC2_ORYSJ2.557e-6360.89Laccase-2 OS=Oryza sativa subsp. japonica GN=LAC2 ... [more]
LAC3_ARATH7.440e-6358.43Laccase-3 OS=Arabidopsis thaliana GN=LAC3 PE=2 SV=... [more]
LAC6_ORYSJ9.717e-6358.47Laccase-6 OS=Oryza sativa subsp. japonica GN=LAC6 ... [more]
LAC25_ORYSJ9.717e-6358.24Laccase-25 OS=Oryza sativa subsp. japonica GN=LAC2... [more]
LAC13_ARATH9.717e-6361.67Laccase-13 OS=Arabidopsis thaliana GN=LAC13 PE=2 S... [more]
LAC9_ORYSJ2.165e-6258.19Putative laccase-9 OS=Oryza sativa subsp. japonica... [more]
LAC10_ARATH2.165e-6260.11Laccase-10 OS=Arabidopsis thaliana GN=LAC10 PE=2 S... [more]
LAC5_ARATH4.822e-6258.99Laccase-5 OS=Arabidopsis thaliana GN=LAC5 PE=2 SV=... [more]
LAC22_ORYSJ6.298e-6262.57Laccase-22 OS=Oryza sativa subsp. japonica GN=LAC2... [more]
LAC14_ARATH8.226e-6258.52Laccase-14 OS=Arabidopsis thaliana GN=LAC14 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionC03003A12SK OF2 Citrus clementina cDNA clone C03003A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291025 ID=CX291025; Name=CX291025; organism=Citrus clementina; type=EST; length=547bp
ACGAGTCGCCTTATAACATCACTATTCACTGGCATGGAATATTTCAGATT
CGAAGCATCTGGGCAGATGGACCAAACATGATAACTCAGTGTCCAATAAG
ACCTGGAAATAGCTACACTTACAAATTTAGAATCATCAATCAAGAAGGAA
CCCTTTGGTGGCATGCTCACATCTCAATGCTGCGAGCCACCGTCCACGGT
GCTTTTATCATCCGCCCTAAGTCTGGTCACAAGTATCCATTTCCTAAACC
CGATAAAGAAGTTCCCATTGTTCTCGGAGAGTGGTGGAATGACGATATCA
TGGATGTTGCCAACCGAGGGGAAATTACCGGTGTAGGTCCTAGAATTTCC
GATGCTTTCACCATCAATGGAAGGCCTGGAGACCTCTATCCCTGCTCGGA
AAATCAAACATACAAGCTTAAGGTTGAGAAAGGGAAGACCTATCTCCTAC
GTATTATCAACGCTGCACTCAATAACCAGCTCTTCTTCAAGATAGCCAAC
CACAAATTTACAGTCGTCGCCGTTGACGCTGGGTACACTGATCCCTA
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