CX291025

Overview
NameCX291025
Unique NameCX291025
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length547
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig345 contig Ccv1_Contig345:313..859. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC11_ARATH (Laccase-11 OS=Arabidopsis thaliana GN=LAC11 PE=2 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 1.403e-61
Identity = 106/178 (59.55%), Postives = 128/178 (71.91%), Query Frame = 3
Query:   12 YNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            YN++IHWHG+ Q R+ WADGP  ITQCPI+ G SY Y F +  Q GTLWWHAHI  LRATV+GA +I P  G  YPFP+P +E  I+LGEWWN D+    N+    G  P +SDA TING+PG L+PCSE  T+ ++ E GKTYLLRIINAALN++LFF IA H  TVV +DA YT P
Sbjct:   76 YNMSIHWHGLKQYRNGWADGPAYITQCPIQTGQSYLYDFNVTGQRGTLWWHAHILWLRATVYGAIVILPAPGKPYPFPQPYQESNIILGEWWNKDVETAVNQANQLGAPPPMSDAHTINGKPGPLFPCSEKHTFVIEAEAGKTYLLRIINAALNDELFFGIAGHNMTVVEIDAVYTKP 253          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC2_ARATH (Laccase-2 OS=Arabidopsis thaliana GN=LAC2 PE=2 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 1.832e-61
Identity = 110/177 (62.15%), Postives = 125/177 (70.62%), Query Frame = 3
Query:   15 NITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            NI+IHWHGI Q+RS WADGP+ +TQCPIR G SY Y F +  Q GTLWWHAHI  +RATV+G  II PK    YPFPKP K+VPI+ GEW+N D   V  +   TG GP  SDA T NG PG LY CS   TYKL V+ GKTYLLR+INAALN++LFF IANH  TVV  DA Y  P
Sbjct:   81 NISIHWHGIRQLRSGWADGPSYVTQCPIRMGQSYVYNFTVTGQRGTLWWHAHIQWMRATVYGPLIILPKLHQPYPFPKPYKQVPILFGEWFNADPQAVVQQALQTGAGPNASDAHTFNGLPGPLYNCSTKDTYKLMVKPGKTYLLRLINAALNDELFFTIANHTLTVVEADACYVKP 257          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC17_ARATH (Laccase-17 OS=Arabidopsis thaliana GN=LAC17 PE=2 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 1.832e-61
Identity = 108/179 (60.34%), Postives = 131/179 (73.18%), Query Frame = 3
Query:    9 PYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            P NI++HWHGI Q+RS WADGP  ITQCPI+ G SY Y + I+ Q GTLW+HAHIS LR+TV+G  II PK G  YPF KP KEVP++ GEW+N D   +  +   TG GP +SDA+TING PG LY CS   T++L+V+ GKTYLLR+INAALN++LFF IANH  TVV  DA Y  P
Sbjct:   74 PNNISLHWHGIRQLRSGWADGPAYITQCPIQTGQSYVYNYTIVGQRGTLWYHAHISWLRSTVYGPLIILPKRGVPYPFAKPHKEVPMIFGEWFNADTEAIIRQATQTGGGPNVSDAYTINGLPGPLYNCSAKDTFRLRVKPGKTYLLRLINAALNDELFFSIANHTVTVVEADAIYVKP 252          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC4_ARATH (Laccase-4 OS=Arabidopsis thaliana GN=IRX12 PE=2 SV=2)

HSP 1 Score: 233.417 bits (594), Expect = 5.332e-61
Identity = 106/178 (59.55%), Postives = 128/178 (71.91%), Query Frame = 3
Query:   12 YNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            YN++IHWHG+ Q+R+ WADGP  ITQCPI+PG  YTY + +  Q GTLWWHAHI  LRATV+GA +I PK G  YPFPKPD E  IVLGEWW  D  ++ N    +G+ P +SD+  ING PG +  C  +Q YKL VE GKTYLLR++NAALN +LFFK+A H FTVV VDA Y  P
Sbjct:   77 YNVSIHWHGVRQVRTGWADGPAYITQCPIQPGQVYTYNYTLTGQRGTLWWHAHILWLRATVYGALVILPKRGVPYPFPKPDNEKVIVLGEWWKSDTENIINEALKSGLAPNVSDSHMINGHPGPVRNC-PSQGYKLSVENGKTYLLRLVNAALNEELFFKVAGHIFTVVEVDAVYVKP 253          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC11_ORYSJ (Putative laccase-11 OS=Oryza sativa subsp. japonica GN=LAC11 PE=5 SV=2)

HSP 1 Score: 230.335 bits (586), Expect = 4.514e-60
Identity = 106/178 (59.55%), Postives = 126/178 (70.79%), Query Frame = 3
Query:   15 NITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPC-SENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            N+T HWHGI Q+RS WADGP  ITQCPIR G SY Y+F +  Q GTLWWHAH S LRAT++G  +I P  G  YPFPKP +EVP++LGEW+N D   V  +   TG GP +SDA+T NG PG  Y C S N T+KL+V  GKTYLLR+INAALN++LFF +ANH   VV  DA Y  P
Sbjct:   44 NVTFHWHGIRQVRSGWADGPAYITQCPIRSGGSYVYRFTVTGQRGTLWWHAHFSWLRATLYGPLVILPPRGVAYPFPKPHREVPLLLGEWFNADPEAVIKQALQTGGGPNVSDAYTFNGLPGPTYNCSSSNDTFKLRVRPGKTYLLRLINAALNDELFFGVANHTLMVVQADASYVKP 221          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC16_ARATH (Laccase-16 OS=Arabidopsis thaliana GN=LAC16 PE=2 SV=2)

HSP 1 Score: 229.18 bits (583), Expect = 1.006e-59
Identity = 106/178 (59.55%), Postives = 122/178 (68.54%), Query Frame = 3
Query:   12 YNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            YN++IHWHGI Q+R+ WADGP  ITQCPI+PG +Y + F +  Q GTLWWHAHI  LRATVHGA +I PK G  YPFPKP KE  IVL EWW  D+ ++ N     G  P  SDA TING  G +  C    +Y L V  GKTY+LRIINAALN +LFFKIA H  TVV VDA YT P
Sbjct:   79 YNVSIHWHGIRQLRTGWADGPAYITQCPIQPGQNYLHNFTLTGQRGTLWWHAHILWLRATVHGAIVILPKLGVPYPFPKPYKEKTIVLSEWWKSDVEELINEASRIGTAPSASDAHTINGHSGSISNCPSQSSYGLPVRAGKTYMLRIINAALNEELFFKIAGHVLTVVEVDAVYTKP 256          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC5_ORYSJ (Putative laccase-5 OS=Oryza sativa subsp. japonica GN=LAC5 PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 1.313e-59
Identity = 103/179 (57.54%), Postives = 127/179 (70.95%), Query Frame = 3
Query:   12 YNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEV-PIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            YN++ HWHGI Q+R+ WADGP+ ITQCPI+ G SY Y F +  Q GTLWWHAH S LR  ++G  +I PK G  +PFP+P KE+ PI+ GEW+N D   V N+   TG GP ISDA+T NG PG  Y CS   TYK+KV+ G+TYLLR+IN+ALN++LFF IANH  TVV  DA Y  P
Sbjct:   88 YNVSFHWHGILQLRNGWADGPSYITQCPIQGGGSYVYDFTVTGQRGTLWWHAHFSWLRVHLYGPLVILPKRGEGFPFPRPYKELPPIMFGEWFNADTEAVINQALQTGAGPNISDAYTFNGLPGPTYNCSSKDTYKVKVQPGRTYLLRLINSALNDELFFGIANHTLTVVEADANYVKP 266          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC14_ORYSJ (Laccase-14 OS=Oryza sativa subsp. japonica GN=LAC14 PE=2 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 2.240e-59
Identity = 110/186 (59.14%), Postives = 134/186 (72.04%), Query Frame = 3
Query:    6 SPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGN----SYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDD--IMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            SPYNITIHWHG+ Q  S WADGP M+TQCPI PG+    SYTY+F +  QEGTLWWHAH+S LRATV+GA +IRP+ G  YPFP P  E  ++LGEWWN    ++DV  +  +TG  P  S A TING PG  +  +  + + L+V +G TYLLR++NAALN QLFFK+A H FTVVAVDA YTDP
Sbjct:   81 SPYNITIHWHGVLQRLSAWADGPAMVTQCPILPGSGAGSSYTYRFNVTGQEGTLWWHAHVSFLRATVYGALLIRPRPGVPYPFPAPHAEHTLLLGEWWNASATLVDVERQAFLTGGQPANSVALTINGMPGLSH--AHKEMHHLRVARGNTYLLRLVNAALNYQLFFKVAAHNFTVVAVDACYTDP 264          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC10_ORYSJ (Laccase-10 OS=Oryza sativa subsp. japonica GN=LAC10 PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 1.452e-58
Identity = 102/177 (57.63%), Postives = 129/177 (72.88%), Query Frame = 3
Query:   15 NITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            NITIHWHG+ Q+R+ W+DGP  +TQCPI+ G SY Y F I  Q GTL+WHAH+S LR+T++G  II PK+G   PF +P K+VPI+ GEW+N D   +  +   TG GP +SDA+TING PG LY CS   T++LKV+ GK YLLR+INAALN++LFF +ANH  TVV VDA Y  P
Sbjct:   83 NITIHWHGVRQMRTGWSDGPAYVTQCPIQTGQSYVYNFTINGQRGTLFWHAHVSWLRSTLYGPIIILPKAGLPLPFTEPHKDVPIIFGEWFNADPEAIVAQALQTGGGPNVSDAYTINGLPGPLYNCSSKDTFRLKVQPGKMYLLRLINAALNDELFFSVANHTLTVVDVDASYVKP 259          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC23_ORYSJ (Laccase-23 OS=Oryza sativa subsp. japonica GN=LAC23 PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 2.477e-58
Identity = 102/180 (56.67%), Postives = 128/180 (71.11%), Query Frame = 3
Query:   12 YNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPF-PKPDKEV-PIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            YN+T+HWHG+ Q+R+ W+DGP  +TQCP+RPG SY Y+F +  QEGTLWWHAH S LRATV+GA +IRP+ G  YPF  +P +E+ PI+LGEWW+ + +DV      TG  P ISDA T+N +PGDLY CS + T    V  G+T LLR INAALN +LF  +A H  TVVA DA YT P
Sbjct:   75 YNVTLHWHGVRQMRTGWSDGPEYVTQCPVRPGQSYRYRFTVAAQEGTLWWHAHSSWLRATVYGALLIRPRDGTSYPFHVQPTRELAPILLGEWWDMNPVDVVRAATRTGAAPNISDALTVNAQPGDLYSCSSHDTAFFPVTSGETNLLRFINAALNTELFVSLAGHNMTVVAADASYTKP 254          
The following BLAST results are available for this feature:
BLAST of CX291025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
LAC11_ARATH1.403e-6159.55Laccase-11 OS=Arabidopsis thaliana GN=LAC11 PE=2 S... [more]
LAC2_ARATH1.832e-6162.15Laccase-2 OS=Arabidopsis thaliana GN=LAC2 PE=2 SV=... [more]
LAC17_ARATH1.832e-6160.34Laccase-17 OS=Arabidopsis thaliana GN=LAC17 PE=2 S... [more]
LAC4_ARATH5.332e-6159.55Laccase-4 OS=Arabidopsis thaliana GN=IRX12 PE=2 SV... [more]
LAC11_ORYSJ4.514e-6059.55Putative laccase-11 OS=Oryza sativa subsp. japonic... [more]
LAC16_ARATH1.006e-5959.55Laccase-16 OS=Arabidopsis thaliana GN=LAC16 PE=2 S... [more]
LAC5_ORYSJ1.313e-5957.54Putative laccase-5 OS=Oryza sativa subsp. japonica... [more]
LAC14_ORYSJ2.240e-5959.14Laccase-14 OS=Oryza sativa subsp. japonica GN=LAC1... [more]
LAC10_ORYSJ1.452e-5857.63Laccase-10 OS=Oryza sativa subsp. japonica GN=LAC1... [more]
LAC23_ORYSJ2.477e-5856.67Laccase-23 OS=Oryza sativa subsp. japonica GN=LAC2... [more]

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Properties
Property NameValue
Genbank descriptionC03003A12SK OF2 Citrus clementina cDNA clone C03003A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291025 ID=CX291025; Name=CX291025; organism=Citrus clementina; type=EST; length=547bp
ACGAGTCGCCTTATAACATCACTATTCACTGGCATGGAATATTTCAGATT
CGAAGCATCTGGGCAGATGGACCAAACATGATAACTCAGTGTCCAATAAG
ACCTGGAAATAGCTACACTTACAAATTTAGAATCATCAATCAAGAAGGAA
CCCTTTGGTGGCATGCTCACATCTCAATGCTGCGAGCCACCGTCCACGGT
GCTTTTATCATCCGCCCTAAGTCTGGTCACAAGTATCCATTTCCTAAACC
CGATAAAGAAGTTCCCATTGTTCTCGGAGAGTGGTGGAATGACGATATCA
TGGATGTTGCCAACCGAGGGGAAATTACCGGTGTAGGTCCTAGAATTTCC
GATGCTTTCACCATCAATGGAAGGCCTGGAGACCTCTATCCCTGCTCGGA
AAATCAAACATACAAGCTTAAGGTTGAGAAAGGGAAGACCTATCTCCTAC
GTATTATCAACGCTGCACTCAATAACCAGCTCTTCTTCAAGATAGCCAAC
CACAAATTTACAGTCGTCGCCGTTGACGCTGGGTACACTGATCCCTA
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