CX291025

Overview
NameCX291025
Unique NameCX291025
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length547
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig345 contig Ccv1_Contig345:313..859. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC17_ORYSJ (Putative laccase-17 OS=Oryza sativa subsp. japonica GN=LAC17 PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 2.477e-58
Identity = 102/180 (56.67%), Postives = 128/180 (71.11%), Query Frame = 3
Query:   12 YNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFP-KPDKEV-PIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            YN+T+HWHG+ Q+R+ W+DGP  +TQCP+RPG SY Y+F +  QEGTLWWHAH S LRATV+GA +IRP+ G  YPF  +P +E+ PI+LGEWW+ + +DV      TG  P ISDA T+N +PGDLY CS + T    V  G+T LLR INAALN +LF  +A H  TVVA DA YT P
Sbjct:   75 YNMTLHWHGVRQMRTGWSDGPEYVTQCPVRPGQSYRYRFTVAAQEGTLWWHAHSSWLRATVYGALLIRPRDGTSYPFDVQPTRELAPILLGEWWDMNPVDVVRAATRTGAAPNISDALTVNAQPGDLYSCSSHDTAVFPVTSGETNLLRFINAALNTELFVSLAGHNMTVVAADASYTKP 254          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC21_ORYSJ (Laccase-21 OS=Oryza sativa subsp. japonica GN=LAC21 PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 1.229e-57
Identity = 95/177 (53.67%), Postives = 126/177 (71.19%), Query Frame = 3
Query:   15 NITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            NITIHWHG+ Q R+ W+DGP  ITQCPIRP   +TY+  +  +EGTLWWHAH    RATV GA ++ PK G  +PF +PDKE+PI+LGEWW +D+  +    +  G   + SDA TING+PGD++PCS + T+K+ VE G TYLL++INA L N +FF ++ H+ TVV +DA YT P
Sbjct:   85 NITIHWHGVDQPRNPWSDGPEFITQCPIRPDGKFTYQVIMSEEEGTLWWHAHSDFDRATVLGAIVVHPKHGDTFPFKRPDKEIPIILGEWWKNDVNHLLEEMKRIGEDVKPSDANTINGQPGDMFPCSRDDTFKVAVEHGNTYLLQVINAGLTNDMFFAVSGHRLTVVGIDARYTKP 261          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC1_ARATH (Laccase-1 OS=Arabidopsis thaliana GN=LAC1 PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 1.605e-57
Identity = 102/178 (57.30%), Postives = 127/178 (71.35%), Query Frame = 3
Query:   12 YNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            +N TIHWHG+ Q R+ WADGP  ITQCPIR   SYTY+F++ +Q GTL WHAH S  RA+V+GAFII P+  + +       E+PI+LGEWWNDD+ +V      TG G ++SDA+T+NG PG LYPCS   T+   V+ GKTY+LRIINAALNN+LF  +ANH  TVV VDA YT P
Sbjct:   79 HNTTIHWHGLRQYRTGWADGPAYITQCPIRSKQSYTYRFKVEDQRGTLLWHAHHSWQRASVYGAFIIYPRQPYPFSGSHIQSEIPIILGEWWNDDVDNVEKAMMKTGAGAKVSDAYTLNGLPGPLYPCSTKDTFTATVDAGKTYILRIINAALNNELFVAVANHTLTVVEVDAVYTKP 256          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC15_ARATH (Laccase-15 OS=Arabidopsis thaliana GN=TT10 PE=1 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 1.359e-56
Identity = 98/177 (55.37%), Postives = 121/177 (68.36%), Query Frame = 3
Query:   15 NITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            NIT+HWHG+ Q R+ W+DGP  ITQCPIRPG+ + YK     ++ T+WWHAH S  RATVHG   + P+     PFPK D EVPI+LGEWW  D+ +V      TG  P +SDA TING PG LYPCS++ T+ L VEKGKTY +R++NAA+N  LFF IANH  TVV+ D  Y  P
Sbjct:   73 NITMHWHGVEQPRNPWSDGPEYITQCPIRPGSDFLYKVIFSIEDTTVWWHAHSSWTRATVHGLIFVYPRPPQILPFPKADHEVPIILGEWWKRDVREVVEEFVRTGGAPNVSDALTINGHPGFLYPCSKSDTFHLTVEKGKTYRIRMVNAAMNLPLFFAIANHSLTVVSADGHYIKP 249          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC15_ORYSJ (Laccase-15 OS=Oryza sativa subsp. japonica GN=LAC15 PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 6.745e-56
Identity = 104/184 (56.52%), Postives = 129/184 (70.11%), Query Frame = 3
Query:    3 ESPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSG-HKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSE--NQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            +SPYN+TIHWHG++Q+ + W DG  MITQ PI+P +++TY+F +  QEGTLWWHAH + LR TVHGA IIRP+ G   YPFP+P +EVPI++GEWW  D+  V +R    G     S   TING+ GDL+ CS      Y L VE GKTYLLRIINAAL ++ F KIA H+FTVVA DA Y  P
Sbjct:   88 KSPYNLTIHWHGVYQLLNCWNDGVPMITQRPIQPNHNFTYRFNVAGQEGTLWWHAHDAFLRGTVHGALIIRPRHGAASYPFPRPHREVPIIIGEWWEKDLPQV-DRNMTNGYFDDYSSGSTINGKLGDLFNCSGVLEDGYVLDVEPGKTYLLRIINAALFSEYFLKIAGHRFTVVASDANYLTP 270          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC1_ORYSJ (Putative laccase-1 OS=Oryza sativa subsp. japonica GN=LAC1 PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.272e-54
Identity = 97/178 (54.49%), Postives = 124/178 (69.66%), Query Frame = 3
Query:   15 NITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYP-CSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            NITIHWHG+ Q R+ W+DGP  ITQCPIRPG ++TY+  +  +EGTLWWHAH    RATVHGA +I PK G  + F K DKE+P     WWNDD+  V ++ +  G     SD  TING+PGD++P CS + T+K+ V++G TYLLR+INA L N +FF IA H+ TVV +DA YT P
Sbjct:   83 NITIHWHGVDQPRNPWSDGPEFITQCPIRPGGNFTYQVILFEEEGTLWWHAHSDFDRATVHGAIVIHPKRGTTFLFRKLDKEIP-----WWNDDVEHVLDKAKRIGGDVEPSDTNTINGQPGDMFPLCSRDDTFKVAVQQGNTYLLRVINAGLTNDMFFAIAGHRLTVVGIDARYTKP 255          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC6_ARATH (Laccase-6 OS=Arabidopsis thaliana GN=LAC6 PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 5.909e-52
Identity = 93/180 (51.67%), Postives = 122/180 (67.78%), Query Frame = 3
Query:    6 SPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            +PYN TIHWHGI Q RS W DGP+ ITQCPI+ G S+TY F++  Q+GT  WHAH S LRATV+G  I+ PK+   YPF KP  E  I+LGE+W  +++++      +G  P  +DAFTING+PG  Y CS    Y++++   K YLLR+INA +N + FF IANH+ T+V VD  YT P
Sbjct:   80 TPYNTTIHWHGIKQKRSCWYDGPSYITQCPIQSGQSFTYNFKVAQQKGTFLWHAHFSWLRATVYGPLIVYPKASVPYPFKKPFNEHTILLGEYWLKNVVELEQHVLESGGPPPPADAFTINGQPGPNYNCSSKDVYEIQIVPRKIYLLRLINAGINMETFFTIANHRLTIVEVDGEYTKP 259          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC19_ORYSJ (Laccase-19 OS=Oryza sativa subsp. japonica GN=LAC19 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 7.717e-52
Identity = 91/181 (50.28%), Postives = 129/181 (71.27%), Query Frame = 3
Query:    9 PYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSE--NQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            P+ +TIHWHG+ Q+RS WADG   +T+CPI PGN +TY+F +  Q GTLWWHAH++ LRAT++GAFI+RP+ G KYPFP P K+VPI++GEWW  D++++ +R  + G       + TING+ GDL  CS    +++ L V+ G++YLLR+IN AL ++ +F++A H FTVV  D  Y  P
Sbjct:   80 PFGLTIHWHGVRQMRSCWADGAGFVTECPIPPGNEHTYRFNVTGQVGTLWWHAHVTCLRATINGAFIVRPRDG-KYPFPTPAKDVPIIIGEWWELDLIEL-DRRMMDGNFDDNPLSATINGKLGDLSNCSRMVEESFILDVKHGESYLLRVINTALFSEYYFRVAGHTFTVVGADGNYLTP 258          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC19_ORYSI (Putative laccase-19 OS=Oryza sativa subsp. indica GN=LAC19 PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 7.717e-52
Identity = 91/181 (50.28%), Postives = 129/181 (71.27%), Query Frame = 3
Query:    9 PYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSE--NQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            P+ +TIHWHG+ Q+RS WADG   +T+CPI PGN +TY+F +  Q GTLWWHAH++ LRAT++GAFI+RP+ G KYPFP P K+VPI++GEWW  D++++ +R  + G       + TING+ GDL  CS    +++ L V+ G++YLLR+IN AL ++ +F++A H FTVV  D  Y  P
Sbjct:   80 PFGLTIHWHGVRQMRSCWADGAGFVTECPIPPGNEHTYRFNVTGQVGTLWWHAHVTCLRATINGAFIVRPRDG-KYPFPTPAKDVPIIIGEWWELDLIEL-DRRMMDGNFDDNPLSATINGKLGDLSNCSRMVEESFILDVKHGESYLLRVINTALFSEYYFRVAGHTFTVVGADGNYLTP 258          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC18_ORYSI (Putative laccase-18 OS=Oryza sativa subsp. indica GN=LAC18 PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 1.719e-51
Identity = 92/181 (50.83%), Postives = 128/181 (70.72%), Query Frame = 3
Query:    9 PYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCS--ENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            P+ +TIHWHG+ Q+RS WADG   +T+CPI PG   TY+F +  Q GTLWWHAH++ LRAT++GAFIIRP+ G KYPFP P K+VPI++GEWW  D++++ +R  + G       + TING+ GDL  CS    +++ L V++G++YLLR+IN AL ++ +FK+A H FTVV  D  Y  P
Sbjct:   81 PHGLTIHWHGVRQMRSCWADGAGYVTECPIHPGGEKTYRFNVTGQVGTLWWHAHVTCLRATINGAFIIRPRDG-KYPFPTPAKDVPIIIGEWWELDLIEL-DRRMLDGNFDDNPLSATINGKLGDLSNCSGTVEESFVLDVKRGESYLLRVINTALFSEYYFKVAGHTFTVVGADGNYLTP 259          
The following BLAST results are available for this feature:
BLAST of CX291025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
LAC17_ORYSJ2.477e-5856.67Putative laccase-17 OS=Oryza sativa subsp. japonic... [more]
LAC21_ORYSJ1.229e-5753.67Laccase-21 OS=Oryza sativa subsp. japonica GN=LAC2... [more]
LAC1_ARATH1.605e-5757.30Laccase-1 OS=Arabidopsis thaliana GN=LAC1 PE=2 SV=... [more]
LAC15_ARATH1.359e-5655.37Laccase-15 OS=Arabidopsis thaliana GN=TT10 PE=1 SV... [more]
LAC15_ORYSJ6.745e-5656.52Laccase-15 OS=Oryza sativa subsp. japonica GN=LAC1... [more]
LAC1_ORYSJ1.272e-5454.49Putative laccase-1 OS=Oryza sativa subsp. japonica... [more]
LAC6_ARATH5.909e-5251.67Laccase-6 OS=Arabidopsis thaliana GN=LAC6 PE=2 SV=... [more]
LAC19_ORYSJ7.717e-5250.28Laccase-19 OS=Oryza sativa subsp. japonica GN=LAC1... [more]
LAC19_ORYSI7.717e-5250.28Putative laccase-19 OS=Oryza sativa subsp. indica ... [more]
LAC18_ORYSI1.719e-5150.83Putative laccase-18 OS=Oryza sativa subsp. indica ... [more]

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Properties
Property NameValue
Genbank descriptionC03003A12SK OF2 Citrus clementina cDNA clone C03003A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291025 ID=CX291025; Name=CX291025; organism=Citrus clementina; type=EST; length=547bp
ACGAGTCGCCTTATAACATCACTATTCACTGGCATGGAATATTTCAGATT
CGAAGCATCTGGGCAGATGGACCAAACATGATAACTCAGTGTCCAATAAG
ACCTGGAAATAGCTACACTTACAAATTTAGAATCATCAATCAAGAAGGAA
CCCTTTGGTGGCATGCTCACATCTCAATGCTGCGAGCCACCGTCCACGGT
GCTTTTATCATCCGCCCTAAGTCTGGTCACAAGTATCCATTTCCTAAACC
CGATAAAGAAGTTCCCATTGTTCTCGGAGAGTGGTGGAATGACGATATCA
TGGATGTTGCCAACCGAGGGGAAATTACCGGTGTAGGTCCTAGAATTTCC
GATGCTTTCACCATCAATGGAAGGCCTGGAGACCTCTATCCCTGCTCGGA
AAATCAAACATACAAGCTTAAGGTTGAGAAAGGGAAGACCTATCTCCTAC
GTATTATCAACGCTGCACTCAATAACCAGCTCTTCTTCAAGATAGCCAAC
CACAAATTTACAGTCGTCGCCGTTGACGCTGGGTACACTGATCCCTA
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