CX291025

Overview
NameCX291025
Unique NameCX291025
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length547
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: ASO_CUCPM (L-ascorbate oxidase OS=Cucurbita pepo var. melopepo PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.162e-21
Identity = 68/196 (34.69%), Postives = 95/196 (48.47%), Query Frame = 3
Query:   18 ITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLR-ATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDI--MDVA-NRGEITGVGPRISDAFTINGR-----------PGDLYPC----SEN-QTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            + IHWHGI Q  + WADG   I+QC I PG ++ Y F + N  GT ++H H+ M R A ++G+ I+ P  G K PF   D E+ ++L +WW+  I   +V  +   I  +G        +NGR             +L PC    SE+   Y   V   KTY +RI +      L F I NH+  VV  D  Y  P
Sbjct:   57 VVIHWHGILQRGTPWADGTASISQCAINPGETFFYNFTVDN-PGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPF-HYDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGE--PQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQP 248          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: ASO_CUCMA (L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 1.202e-20
Identity = 66/196 (33.67%), Postives = 92/196 (46.94%), Query Frame = 3
Query:   18 ITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLR-ATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDI--MDVA-NRGEITGVGPRISDAFTINGR-----------PGDLYPCSENQT-----YKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            + IHWHGI Q  + WADG   I+QC I PG ++ Y F + N  GT ++H H+ M R A ++G+ I+ P  G K PF   D E+ ++L +WW+  I   +V  +   I  +G        +NGR             +L PC    +     Y   V   KTY +RI +      L F I NH   VV  D  Y  P
Sbjct:   87 VVIHWHGILQRGTPWADGTASISQCAINPGETFFYNFTVDN-PGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPF-HYDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGE--PQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSEPCAPYIFHVMPKKTYRIRIASTTALAALNFAIGNHPLLVVEADGNYVQP 278          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC2_TRAVE (Laccase-2 OS=Trametes versicolor GN=LCC2 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.050e-20
Identity = 57/180 (31.67%), Postives = 87/180 (48.33%), Query Frame = 3
Query:   21 TIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRAT-VHGAFII-RPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRI---SDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            +IHWHG FQ  + WADGP  + QCPI  G+S+ Y F + +Q GT W+H+H+S      + G F++  PK  H   +   ++   I L +W++              +GPR    +DA  ING  G            + V+ GK Y  R+++ + +    F I  H  TV+ VD   + P
Sbjct:   82 SIHWHGFFQAGTNWADGPAFVNQCPIASGHSFLYDFHVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPKDPHASRYDVDNESTVITLTDWYH----------TAARLGPRFPLGADATLINGL-GRSASTPTAALAVINVQHGKRYRFRLVSISCDPNYTFSIDGHNLTVIEVDGINSQP 250          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: FET3_KLULA (Iron transport multicopper oxidase FET3 OS=Kluyveromyces lactis GN=FET3 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.566e-20
Identity = 63/184 (34.24%), Postives = 93/184 (50.54%), Query Frame = 3
Query:   15 NITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHI-SMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDI-------MDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTD 542
            N ++H+HG+ Q  +   DGP MITQCPI PG++  Y F I + +GT W+H+H     +  + G  ++ P+    + +   D+EV + L EW+ D++       M+V N    TG  P I     IN         + N T+   VE   TYLLRI+N       +F I +H  TVV VD  Y +
Sbjct:   81 NTSLHFHGLSQNGTNMMDGPEMITQCPIAPGDTMLYNFTIDDNDGTYWYHSHTGGQYQDGMKGTLVVEPEDSLPFDY---DEEVVVQLAEWYYDNVDTLDRKFMNVYNP---TGAEP-IPQNLIINN--------TRNMTW--NVEPDTTYLLRIVNTGGFVSQYFWIEDHDMTVVEVDGVYVE 247          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC4_THACU (Laccase-4 OS=Thanatephorus cucumeris GN=LCC4 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.964e-20
Identity = 59/178 (33.15%), Postives = 88/178 (49.44%), Query Frame = 3
Query:   21 TIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHI-SMLRATVHGAFII-RPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANR---GEITGVGPRISDAFTINGR----PGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVD 527
            TIHWHG+FQ  +   DGP  +TQCPI    SYTY+  +  Q GT+W+HAH+ S     + G  +I  P   HK  +   D    ++L +W++     +  +      T +   + D+  ING+     G   P S      + V++GK Y LR+INA+      F I  H+ TV+  D
Sbjct:   81 TIHWHGLFQATTADEDGPAFVTQCPIAQNLSYTYEIPLHGQTGTMWYHAHLASQYVDGLRGPLVIYDPNDPHKSRYDVDDASTVVMLEDWYHTPAPVLEKQMFSTNNTALLSPVPDSGLINGKGRYVGGPAVPRS-----VINVKRGKRYRLRVINASAIGSFTFSIEGHRLTVIEAD 253          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC1_TRAHI (Laccase OS=Trametes hirsuta PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.964e-20
Identity = 56/177 (31.64%), Postives = 89/177 (50.28%), Query Frame = 3
Query:   21 TIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRAT-VHGAFII-RPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            +IHWHG FQ  + WADGP  + QCPI  G+S+ Y F++ +Q GT W+H+H+S      + G F++  P   H   +   + +  I L +W++      A  G    +G   +DA  ING  G     +      + V KGK Y  R+++ + +    F I  H  T++ VD+  + P
Sbjct:   83 SIHWHGFFQKGTNWADGPAFVNQCPISSGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASLYDVDNDDTVITLADWYH----TAAKLGPAFPLG---ADATLINGL-GRSPSTTAADLAVINVTKGKRYRFRLVSLSCDPNHTFSIDGHDLTIIEVDSINSQP 251          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC1_PHLRA (Laccase OS=Phlebia radiata GN=LAC PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 5.964e-20
Identity = 60/179 (33.52%), Postives = 88/179 (49.16%), Query Frame = 3
Query:   21 TIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRAT-VHGAFII-RPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTIN--GRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            TIHWHG FQ  + WADGP  I QCPI  G+S+ Y F++ +Q GT W+H+H+S      + G F++  P   +   +   D    I L +W++      A R    G     +D   IN  GR G+   C  +    + V KGK Y  R+++ + ++   F I  H   V+ VDA    P
Sbjct:   83 TIHWHGFFQHGTNWADGPAFINQCPIASGDSFLYNFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPADPYLDQYDVDDDSTVITLADWYH-----TAAR---LGSPFPAADTTLINGLGRCGEA-GCPVSDLAVISVTKGKRYRFRLVSISCDSFFTFSIDGHSLNVIEVDATNHQP 252          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC4_TRAVI (Laccase-4 OS=Trametes villosa GN=LCC4 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 7.789e-20
Identity = 56/177 (31.64%), Postives = 86/177 (48.59%), Query Frame = 3
Query:   21 TIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRAT-VHGAFII-RPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            +IHWHG FQ  + WADG   + QCPI  GNS+ Y F   +Q GT W+H+H+S      + G  ++  P   H   +   D+   I L +W++      A+ G    +G   SD+  ING  G            + VE+GK Y +R+++ + +    F I  H  T++  DA   +P
Sbjct:   84 SIHWHGFFQKGTNWADGAAFVNQCPIATGNSFLYDFTATDQAGTFWYHSHLSTQYCDGLRGPMVVYDPSDPHADLYDVDDETTIITLSDWYH----TAASLGAAFPIG---SDSTLINGL-GRFAGGDSTDLAVITVEQGKRYRMRLLSLSCDPNYVFSIDGHNMTIIEADAVNHEP 252          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC4_TRAVE (Laccase-4 OS=Trametes versicolor GN=LCC4 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 7.789e-20
Identity = 56/177 (31.64%), Postives = 86/177 (48.59%), Query Frame = 3
Query:   21 TIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRAT-VHGAFII-RPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            +IHWHG FQ  + WADG   + QCPI  GNS+ Y F   +Q GT W+H+H+S      + G  ++  P   H   +   D+   I L +W++      A+ G    +G   SD+  ING  G            + VE+GK Y +R+++ + +    F I  H  T++  DA   +P
Sbjct:   84 SIHWHGFFQKGTNWADGAAFVNQCPIATGNSFLYDFTATDQAGTFWYHSHLSTQYCDGLRGPMVVYDPSDPHADLYDVDDETTIITLSDWYH----TAASLGAAFPIG---SDSTLINGL-GRFAGGDSTDLAVITVEQGKRYRMRLLSLSCDPNYVFSIDGHNMTIIEADAVNHEP 252          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC3_TRAVI (Laccase-3 OS=Trametes villosa GN=LCC3 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 7.789e-20
Identity = 57/181 (31.49%), Postives = 90/181 (49.72%), Query Frame = 3
Query:   21 TIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRAT-VHGAFII-RPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFT-INGR---PGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            TIHWHG+FQ  + WADGP  +TQCPI  G+ + Y FR+ +Q GT W+H+H+++     + G  +I  P     Y +   D+   I L +W++                P +  A T ING    PG+  P ++     ++V+ GK Y  R+++ + +    F I  H  T++  D   T P
Sbjct:   83 TIHWHGMFQHTTNWADGPAFVTQCPITTGDDFLYNFRVPDQTGTYWYHSHLALQYCDGLRGPLVIYDPHDPQAYLYDVDDESTVITLADWYHTP-------------APLLPPAATLINGLGRWPGN--PTADLAV--IEVQHGKRYRFRLVSTSCDPNYNFTIDGHTMTIIEADGQNTQP 246          
The following BLAST results are available for this feature:
BLAST of CX291025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
ASO_CUCPM3.162e-2134.69L-ascorbate oxidase OS=Cucurbita pepo var. melopep... [more]
ASO_CUCMA1.202e-2033.67L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=... [more]
LAC2_TRAVE2.050e-2031.67Laccase-2 OS=Trametes versicolor GN=LCC2 PE=1 SV=1[more]
FET3_KLULA4.566e-2034.24Iron transport multicopper oxidase FET3 OS=Kluyver... [more]
LAC4_THACU5.964e-2033.15Laccase-4 OS=Thanatephorus cucumeris GN=LCC4 PE=1 ... [more]
LAC1_TRAHI5.964e-2031.64Laccase OS=Trametes hirsuta PE=1 SV=1[more]
LAC1_PHLRA5.964e-2033.52Laccase OS=Phlebia radiata GN=LAC PE=1 SV=2[more]
LAC4_TRAVI7.789e-2031.64Laccase-4 OS=Trametes villosa GN=LCC4 PE=3 SV=1[more]
LAC4_TRAVE7.789e-2031.64Laccase-4 OS=Trametes versicolor GN=LCC4 PE=3 SV=1[more]
LAC3_TRAVI7.789e-2031.49Laccase-3 OS=Trametes villosa GN=LCC3 PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC03003A12SK OF2 Citrus clementina cDNA clone C03003A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291025 ID=CX291025; Name=CX291025; organism=Citrus clementina; type=EST; length=547bp
ACGAGTCGCCTTATAACATCACTATTCACTGGCATGGAATATTTCAGATT
CGAAGCATCTGGGCAGATGGACCAAACATGATAACTCAGTGTCCAATAAG
ACCTGGAAATAGCTACACTTACAAATTTAGAATCATCAATCAAGAAGGAA
CCCTTTGGTGGCATGCTCACATCTCAATGCTGCGAGCCACCGTCCACGGT
GCTTTTATCATCCGCCCTAAGTCTGGTCACAAGTATCCATTTCCTAAACC
CGATAAAGAAGTTCCCATTGTTCTCGGAGAGTGGTGGAATGACGATATCA
TGGATGTTGCCAACCGAGGGGAAATTACCGGTGTAGGTCCTAGAATTTCC
GATGCTTTCACCATCAATGGAAGGCCTGGAGACCTCTATCCCTGCTCGGA
AAATCAAACATACAAGCTTAAGGTTGAGAAAGGGAAGACCTATCTCCTAC
GTATTATCAACGCTGCACTCAATAACCAGCTCTTCTTCAAGATAGCCAAC
CACAAATTTACAGTCGTCGCCGTTGACGCTGGGTACACTGATCCCTA
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