CX291025

Overview
NameCX291025
Unique NameCX291025
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length547
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig345 contig Ccv1_Contig345:313..859. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC2_TRAVI (Laccase-2 OS=Trametes villosa GN=LCC2 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.329e-19
Identity = 56/177 (31.64%), Postives = 87/177 (49.15%), Query Frame = 3
Query:   21 TIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRAT-VHGAFII-RPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            +IHWHG FQ  + WA+GP  + QCPI  G+S+ Y F + +Q GT W+H+H+S      + G F++  PK  H   +   ++   I L +W++      A  G    +G   +DA  ING  G            + V+ GK Y  R+++ + +    F I  H  TV+ VD   + P
Sbjct:   82 SIHWHGFFQAGTNWAEGPAFVNQCPIASGHSFLYDFHVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPKDPHASRYDVDNESTVITLTDWYH----TAARLGPKFPLG---ADATLINGL-GRSASTPTAALAVINVQHGKRYRFRLVSISCDPNYTFSIDGHNLTVIEVDGINSQP 250          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC1_PLEOS (Laccase-1 OS=Pleurotus ostreatus GN=POX1 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.960e-19
Identity = 56/172 (32.56%), Postives = 84/172 (48.84%), Query Frame = 3
Query:   21 TIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRAT-VHGAFII-RPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDA 530
            +IHWHG FQ  S WADGP  + QCPI  GNS+ Y F + +Q GT W+H+H+S      + G FI+  P   H   +   + +  I L +W++     VA +  +       +D+  ING+ G       +    + VE  K Y  R+I+ + +    F I  H   V+  DA
Sbjct:   94 SIHWHGFFQSGSTWADGPAFVNQCPIASGNSFLYDFNVPDQAGTFWYHSHLSTQYCDGLRGPFIVYDPSDPHLSLYDVDNADTIITLEDWYH----VVAPQNAVLPT----ADSTLINGK-GRFAGGPTSALAVINVESNKRYRFRLISMSCDPNFTFSIDGHSLQVIEADA 256          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: FET3_CANAL (Iron transport multicopper oxidase FET3 OS=Candida albicans GN=FET3 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 3.865e-19
Identity = 60/181 (33.15%), Postives = 89/181 (49.17%), Query Frame = 3
Query:   15 NITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHI-SMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVA----NRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTD 542
            N T+H+HG+F   +   DGP M+TQCPI PG +Y Y F + +Q GT W+H+H        + G FII       +P+   D+EV + L + ++    D+      R   TG  P I   F  N          E +    KVE GKTY +RI+N       +  + +H+FT+V +D  Y +
Sbjct:   77 NTTLHFHGLFVRGANQMDGPEMVTQCPIPPGETYLYNFTVTDQVGTYWYHSHTGGQYGDGMRGVFIIEDDD---FPY-HYDEEVVLTLSDHYHKYSGDIGPAFLTRFNPTGAEP-IPQNFLFN----------ETRNATWKVEPGKTYFVRILNVGGFVSQYLWMEDHEFTIVEIDGVYVE 242          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: ASO_TOBAC (L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 8.611e-19
Identity = 61/200 (30.50%), Postives = 93/200 (46.50%), Query Frame = 3
Query:   18 ITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLR-ATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWW----NDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYK-------------------LKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            + IHWHGI QI + WADG   I+QC I PG ++ Y+F+ +++ GT ++H H  M R A ++G+ I+    G K PF   D E  ++L +WW    ++  +D+++   +  +G        +NGR    Y CS    +                    L+V   K Y LR+ +      L   I  HK  VV  D  Y  P
Sbjct:   84 VVIHWHGIRQIGTPWADGTAAISQCAINPGETFLYRFK-VDKAGTYFYHGHYGMQRSAGLYGSLIVEVGEGEKEPF-HYDGEFNLLLSDWWHKGSHEQEVDLSS-NPLRWIGE--PQTLLLNGR--GQYNCSLAARFSKPPLPQCKLRGGEQYAPQILRVRPNKIYRLRVASTTALGSLSLAIGGHKMVVVEADGNYVQP 276          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC2_PLEOS (Laccase-2 OS=Pleurotus ostreatus GN=POX2 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.125e-18
Identity = 54/172 (31.40%), Postives = 84/172 (48.84%), Query Frame = 3
Query:   21 TIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRAT-VHGAFII-RPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDA 530
            +IHWHG FQ  S WADGP  +TQCP+  G+S+ Y F + +Q GT W+H+H+S      + G F++  P   H   +   + +  I L +W++  I+   N    T       D+  ING+ G       +    + VE  K Y  R+++ + +    F I  H   V+  DA
Sbjct:   96 SIHWHGFFQAGSSWADGPAFVTQCPVASGDSFLYNFNVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPSDPHLSLYDIDNADTVITLEDWYH--IVAPQNAAIPT------PDSTLINGK-GRYAGGPTSPLAIINVESNKRYRFRLVSMSCDPNFTFSIDGHSLLVIEADA 258          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC1_PYCCI (Laccase OS=Pycnoporus cinnabarinus GN=LCC3-1 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.125e-18
Identity = 57/180 (31.67%), Postives = 91/180 (50.56%), Query Frame = 3
Query:   21 TIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRAT-VHGAFII-RPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRI---SDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            +IHWHG FQ  + WADG + + QCPI  G+S+ Y F++ +Q GT W+H+H+S      + G F++  P       +   + +  I L +W++     VA +     +GPR    +DA  ING  G     +      +KV +GK Y  R+++ + +    F I  H  TV+  D+  T P
Sbjct:   83 SIHWHGFFQHGTNWADGVSFVNQCPIASGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPQASLYDIDNDDTVITLADWYH-----VAAK-----LGPRFPLGADATLINGL-GRSPGTTTADLAVIKVTQGKRYRFRLVSLSCDPNHTFSIDGHTMTVIEADSVNTQP 251          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC5_TRAVI (Laccase-5 OS=Trametes villosa GN=LCC5 PE=3 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 1.918e-18
Identity = 56/174 (32.18%), Postives = 82/174 (47.13%), Query Frame = 3
Query:   21 TIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRAT-VHGAFII-RPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGR---PGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVD 527
            TIHWHGIFQ  + WADG   + QCPI  GNS+ Y F + +Q GT W+H+H+S      + G  ++  P   +   +   D    I L +W++      A  G     GP   D+  ING     GD           + V +GK Y  R+++ + +    F I  H  T++ VD
Sbjct:   85 TIHWHGIFQAGTNWADGAAFVNQCPIATGNSFLYDFTVPDQAGTFWYHSHLSTQYCDGLRGPLVVYDPDDPNASLYDVDDDTTVITLADWYH----TAAKLGPAFPAGP---DSVLINGLGRFSGD--GGGATNLTVITVTQGKRYRFRLVSISCDPNFTFSIDGHNMTIIEVD 249          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC2_BOTFU (Laccase-2 OS=Botryotinia fuckeliana GN=lcc2 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.274e-18
Identity = 60/180 (33.33%), Postives = 95/180 (52.78%), Query Frame = 3
Query:   21 TIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRAT-VHGAFIIRPKSGHKYPFPKPDKEV-PIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSEN---------QTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVD 527
            +IHWHGI Q+ S+  DG   +TQCPI PG++ TYKF+   Q GT W+H+H S+  A  + G  II   +   Y     D++V  I L +W +  + ++ +     G  P + +   +NG   ++Y CS +         + ++L   +G  Y LR+IN  +++   F I NH  TV+A D
Sbjct:  123 SIHWHGIRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQ-ATQYGTTWYHSHFSLQYADGLFGPLIINGPATADY-----DEDVGAIFLQDWAHKSVFEIWDSAR-QGAPPALENTL-MNGT--NIYDCSASTDANCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIAND 292          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC1_TRAVI (Laccase-1 OS=Trametes villosa GN=LCC1 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.274e-18
Identity = 55/177 (31.07%), Postives = 87/177 (49.15%), Query Frame = 3
Query:   21 TIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRAT-VHGAFII-RPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            +IHWHG FQ  + WADGP  I QCPI  G+S+ Y F++ +Q GT W+H+H+S      + G F++  P       +   + +  I L +W++      A  G    +G   +DA  ING+ G     +      + V  GK Y  R+++ + +    F I  H  T++  D+  T P
Sbjct:   83 SIHWHGFFQKGTNWADGPAFINQCPISSGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPAADLYDVDNDDTVITLVDWYH----VAAKLGPAFPLG---ADATLINGK-GRSPSTTTADLSVISVTPGKRYRFRLVSLSCDPNYTFSIDGHNMTIIETDSINTAP 251          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC5_TRAVE (Laccase-5 OS=Trametes versicolor GN=LCC5 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.582e-18
Identity = 55/173 (31.79%), Postives = 81/173 (46.82%), Query Frame = 3
Query:   21 TIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRAT-VHGAFII-RPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGR---PGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAV 524
            TIHWHGIFQ  + WADG   + QCPI  GNS+ Y F + +Q GT W+H+H+S      + G  ++  P   +   +   D    I L +W++      A  G     GP   D+  ING     GD           + V +GK Y  R+++ + +    F I  H  T++ V
Sbjct:   85 TIHWHGIFQAGTNWADGAAFVNQCPIATGNSFLYDFTVPDQAGTFWYHSHLSTQYCDGLRGPLVVYDPDDANASLYDVDDDTTVITLADWYH----TAAKLGPAFPAGP---DSVLINGLGRFSGD--GGGATNLTVITVTQGKRYRFRLVSISCDPNFTFSIDGHNMTIIEV 248          
The following BLAST results are available for this feature:
BLAST of CX291025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
LAC2_TRAVI1.329e-1931.64Laccase-2 OS=Trametes villosa GN=LCC2 PE=3 SV=1[more]
LAC1_PLEOS2.960e-1932.56Laccase-1 OS=Pleurotus ostreatus GN=POX1 PE=2 SV=1[more]
FET3_CANAL3.865e-1933.15Iron transport multicopper oxidase FET3 OS=Candida... [more]
ASO_TOBAC8.611e-1930.50L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE... [more]
LAC2_PLEOS1.125e-1831.40Laccase-2 OS=Pleurotus ostreatus GN=POX2 PE=1 SV=1[more]
LAC1_PYCCI1.125e-1831.67Laccase OS=Pycnoporus cinnabarinus GN=LCC3-1 PE=1 ... [more]
LAC5_TRAVI1.918e-1832.18Laccase-5 OS=Trametes villosa GN=LCC5 PE=3 SV=2[more]
LAC2_BOTFU4.274e-1833.33Laccase-2 OS=Botryotinia fuckeliana GN=lcc2 PE=2 S... [more]
LAC1_TRAVI4.274e-1831.07Laccase-1 OS=Trametes villosa GN=LCC1 PE=3 SV=1[more]
LAC5_TRAVE5.582e-1831.79Laccase-5 OS=Trametes versicolor GN=LCC5 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC03003A12SK OF2 Citrus clementina cDNA clone C03003A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291025 ID=CX291025; Name=CX291025; organism=Citrus clementina; type=EST; length=547bp
ACGAGTCGCCTTATAACATCACTATTCACTGGCATGGAATATTTCAGATT
CGAAGCATCTGGGCAGATGGACCAAACATGATAACTCAGTGTCCAATAAG
ACCTGGAAATAGCTACACTTACAAATTTAGAATCATCAATCAAGAAGGAA
CCCTTTGGTGGCATGCTCACATCTCAATGCTGCGAGCCACCGTCCACGGT
GCTTTTATCATCCGCCCTAAGTCTGGTCACAAGTATCCATTTCCTAAACC
CGATAAAGAAGTTCCCATTGTTCTCGGAGAGTGGTGGAATGACGATATCA
TGGATGTTGCCAACCGAGGGGAAATTACCGGTGTAGGTCCTAGAATTTCC
GATGCTTTCACCATCAATGGAAGGCCTGGAGACCTCTATCCCTGCTCGGA
AAATCAAACATACAAGCTTAAGGTTGAGAAAGGGAAGACCTATCTCCTAC
GTATTATCAACGCTGCACTCAATAACCAGCTCTTCTTCAAGATAGCCAAC
CACAAATTTACAGTCGTCGCCGTTGACGCTGGGTACACTGATCCCTA
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