CX291025

Overview
NameCX291025
Unique NameCX291025
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length547
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig345 contig Ccv1_Contig345:313..859. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: SKS2_ARATH (Monocopper oxidase-like protein SKS2 OS=Arabidopsis thaliana GN=SKS2 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.060e-17
Identity = 54/183 (29.51%), Postives = 96/183 (52.46%), Query Frame = 3
Query:   18 ITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATV-HGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDD---IMDVANRGEITGVGPRISDAFTINGRPGDLYPCS-----ENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYT 539
            + + W G+   R+ W DG  + T CPI P  ++TY F++ +Q G+ ++   ++  RA+   GA II  +     PF +PD E+  ++G+W+  +   +  + + G+  G+     D   ING+    Y  S     E++T  + V+ GKTY +R+ N  ++  L F+I NHK  ++  +  YT
Sbjct:   80 LLLTWPGVQMRRNSWQDGV-LGTNCPIPPNWNFTYDFQLKDQIGSYFYSPSLNFQRASGGFGALIINNRDLVPIPFTEPDGEIIFIIGDWYTQNHTALRRILDSGKELGM----PDGVLINGKGPFKYNSSVPDGIEHET--VNVDPGKTYRIRVHNVGISTSLNFRIQNHKLLLIETEGRYT 255          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: SKS1_ARATH (Monocopper oxidase-like protein SKS1 OS=Arabidopsis thaliana GN=SKS1 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.060e-17
Identity = 55/178 (30.90%), Postives = 90/178 (50.56%), Query Frame = 3
Query:   18 ITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATV-HGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCS--ENQTY-KLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYT 539
            + + W GI   R+ W DG  + T CPI P  ++TY+F++ +Q G+ ++   ++  RA+   G  +I  +     PFP+PD E+  ++G+W+  D      R   +G    + D   ING+    Y  S  +   Y    VE GKTY +R+ N  ++  L F+I NH   +V  +  YT
Sbjct:   81 LLLTWPGIQMRRNSWQDGV-LGTNCPIPPRWNFTYQFQVKDQIGSFFYSPSLNFQRASGGFGPIVINNRDIIPIPFPQPDGELIFIIGDWYTQD-HKALRRALDSGKELGMPDGVLINGKGPYKYNSSVPDGIDYLTFHVEPGKTYRIRVHNVGISTSLNFRIQNHSLLLVETEGHYT 256          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: SKU5_ARATH (Monocopper oxidase-like protein SKU5 OS=Arabidopsis thaliana GN=SKU5 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.053e-16
Identity = 52/182 (28.57%), Postives = 90/182 (49.45%), Query Frame = 3
Query:   18 ITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATV-HGAFIIRPKSGHKYPFPKPDKEVPIVLGEWW---NDDIMDVANRGEITGVGPRISDAFTING----RPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYT 539
            + +HW+GI Q R  W DG  + T CPI P  ++TY+F++ +Q G+ ++   +   RA+   G+F++ P++    PF  PD ++ + +G+W+   +  +    + G+  G+     D   ING    R  D           + V  GKTY LR+ N  ++  L F+I  H   +   +  YT
Sbjct:   77 LLLHWNGIQQRRVSWQDGV-LGTNCPIPPKWNWTYEFQVKDQIGSFFYFPSLHFQRASGGFGSFVVNPRAIIPVPFSTPDGDITVTIGDWYIRNHTALRKALDDGKDLGM----PDGVLINGKGPYRYNDTLVADGIDFETITVHPGKTYRLRVSNVGISTSLNFRIQGHNLVLAESEGSYT 253          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: FET5_YEAST (Iron transport multicopper oxidase FET5 OS=Saccharomyces cerevisiae GN=FET5 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.053e-16
Identity = 59/185 (31.89%), Postives = 88/185 (47.57%), Query Frame = 3
Query:   21 TIHWHGIFQIRSIW----ADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHI-SMLRATVHGAFIIR-PKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVA----NRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 545
            ++H+HG+FQ  S+      DGP+M+TQCPI PG +Y Y F +  Q GT W+HAH+ +     + GAFII  P+   +Y     D E  I L + ++++   V     +R   TG  P I      N                L    G+TYL R +N  L    +  + +H+ ++V VD  Y  P
Sbjct:   77 SLHFHGLFQNTSLGNQLQMDGPSMVTQCPIVPGQTYLYNFTVPEQVGTFWYHAHMGAQYGDGMRGAFIIHDPEEPFEY-----DHERVITLSDHYHENYKTVTKEFLSRYNPTGAEP-IPQNILFN----------NTMNVTLDFTPGETYLFRFLNVGLFVSQYIILEDHEMSIVEVDGVYVKP 245          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: FET3_CANGA (Iron transport multicopper oxidase FET3 OS=Candida glabrata GN=FET3 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.375e-16
Identity = 57/180 (31.67%), Postives = 90/180 (50.00%), Query Frame = 3
Query:   15 NITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHI-SMLRATVHGAFIIRPKSGHK-YPFPKPDKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKL--KVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTD 542
            N ++H+HG+FQ  +   DG   +TQCPI PG++  Y F +    GT W+H+H        + G F+I     +K +P+ + D++V + +GEW+ D  +DV  R  +    P  ++    N           N T  L  +V+   TYLLRI+N       +F I +H+  VV VD  Y +
Sbjct:   73 NTSLHFHGMFQRGTNQMDGVPYLTQCPIGPGDTMLYNFTVDENVGTYWYHSHTDGQYEDGMRGLFVIEDGENNKNFPY-EYDEDVMLSIGEWY-DTTVDVLTRKFLNLNNPTGAEPIPQN--------LILNNTMNLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMEVVEVDGVYVE 242          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: FET3_YEAST (Iron transport multicopper oxidase FET3 OS=Saccharomyces cerevisiae GN=FET3 PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 2.345e-16
Identity = 58/181 (32.04%), Postives = 91/181 (50.28%), Query Frame = 3
Query:   15 NITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHI-SMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANR----GEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTD 542
            N ++H+HG+FQ  +   DG   +TQCPI PG++  Y F +    GT W+H+H        + G FII+  S   +P+   D+E+ + L EW++D + D+          TG  P I     +N         + N T+  +V+   TYLLRI+N       +F I +H+ TVV +D   T+
Sbjct:   77 NTSMHFHGLFQNGTASMDGVPFLTQCPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDS---FPYDY-DEELSLSLSEWYHDLVTDLTKSFMSVYNPTGAEP-IPQNLIVNN--------TMNLTW--EVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTE 242          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC3_BOTFU (Laccase-3 (Fragment) OS=Botryotinia fuckeliana GN=lcc3 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 7.544e-15
Identity = 50/170 (29.41%), Postives = 80/170 (47.06%), Query Frame = 3
Query:   24 IHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHI-SMLRATVHGAFIIRPKSGHKYPFPKPDKEVPI-VLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVD 527
            IHWHG+ Q  +   DG   IT+CP+ PG++ TY F+   Q GT W+H+H  S     + G  +I   +   Y     D ++ +  + +W+   +  +  R   +  GP   D   ING        +  +     +  GK Y LR+IN +++N     + NH FTV+  D
Sbjct:   28 IHWHGLRQYHTCTEDGVPGITECPLAPGDTKTYTFQ-ATQFGTSWYHSHYSSQYGEGMLGGIVINGPATSNY-----DVDLGVYTISDWYYTPVFALGERIAHSQAGPPSGDNGLINGSMVAPAGQTGGKYTTNTITAGKKYRLRLINTSVDNHFMVSLDNHAFTVITSD 191          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC1_CRYPA (Laccase OS=Cryphonectria parasitica GN=LAC-1 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.744e-14
Identity = 58/173 (33.53%), Postives = 81/173 (46.82%), Query Frame = 3
Query:   21 TIHWHGIFQIRSIWADGPNMITQCPIRP-GNSYTYKFRIINQEGTLWWHAHISMLRAT-VHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWW--NDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVD 527
            TIHWHGI Q+ +   DG N IT+CPI P G S TY F I +Q GT W+H+H S      + GA  I   +   Y         P+VL +++    D + V  +       P  SD    NG   +    ++ Q   + +  GK + LRIIN ++ N     I  H  TV+  D
Sbjct:  124 TIHWHGIRQLNTNLQDGVNGITECPIPPNGGSKTYTF-IAHQYGTSWYHSHFSAQYGNGIVGAIQIDGPASLPYDIDLG----PLVLSDYYYKTADELVVYTQSN----APPASDNVLFNGTNINPANTTQGQYKTITLTPGKRHRLRIINTSVENNFQVSIVGHSMTVIESD 287          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: ASOL_BRANA (L-ascorbate oxidase homolog OS=Brassica napus GN=Bp10 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.423e-13
Identity = 51/182 (28.02%), Postives = 89/182 (48.90%), Query Frame = 3
Query:    3 ESPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRAT-VHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWW---NDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGY 536
            + P+ +T  W+GI   ++ W DG    T CPI PG +YTY F+  +Q G+ +++    M RA   +G   +  +     P+  P+ +  +++G+W+   +  +    + G   G      D   ING+ G     S+   + LK   GKTY +RI N  +   + F+I NHK  +V ++  +
Sbjct:   77 DEPFLLT--WNGIQHRKNCWQDGTPG-TMCPIMPGTNYTYHFQPKDQIGSYFYYPTTGMHRAAGGYGGLRVNSRLLIPVPYADPEDDYTVLIGDWYTKSHTQLKKFLDGGRTIG----RPDGIVINGKSGK-GDGSDAPLFTLK--PGKTYRVRICNVGVKTSINFRIQNHKMKLVEMEGSH 248          
BLAST of CX291025 vs. ExPASy Swiss-Prot
Match: LAC1_BOTFU (Laccase-1 OS=Botryotinia fuckeliana GN=lcc1 PE=2 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 5.406e-13
Identity = 53/178 (29.78%), Postives = 82/178 (46.07%), Query Frame = 3
Query:   21 TIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAH-ISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWN----DDIMDVANRGE----ITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVD 527
            +IHWHGI Q+ +   DG   ITQCPI PG + TYKF   N  G+ W+H+H I      + G  +I   +   Y     D ++ ++    WN      + D A  G     +TG+   ++   T NG           + ++     G  Y +R++N A++    F I  H F V+A+D
Sbjct:  117 SIHWHGIRQLNNAQYDGVPGITQCPIAPGGTLTYKFHADNY-GSSWYHSHFILQYGDGLFGPLVINGPATANY-----DVDLGMLFLNDWNHVPVQSLWDKAKTGAPPTLLTGL---MNGTNTYNG---------AGKKFQTTFTPGLKYRIRVVNTAVDGHFQFSIDGHSFQVIAMD 276          
The following BLAST results are available for this feature:
BLAST of CX291025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
SKS2_ARATH8.060e-1729.51Monocopper oxidase-like protein SKS2 OS=Arabidopsi... [more]
SKS1_ARATH8.060e-1730.90Monocopper oxidase-like protein SKS1 OS=Arabidopsi... [more]
SKU5_ARATH1.053e-1628.57Monocopper oxidase-like protein SKU5 OS=Arabidopsi... [more]
FET5_YEAST1.053e-1631.89Iron transport multicopper oxidase FET5 OS=Sacchar... [more]
FET3_CANGA1.375e-1631.67Iron transport multicopper oxidase FET3 OS=Candida... [more]
FET3_YEAST2.345e-1632.04Iron transport multicopper oxidase FET3 OS=Sacchar... [more]
LAC3_BOTFU7.544e-1529.41Laccase-3 (Fragment) OS=Botryotinia fuckeliana GN=... [more]
LAC1_CRYPA3.744e-1433.53Laccase OS=Cryphonectria parasitica GN=LAC-1 PE=3 ... [more]
ASOL_BRANA1.423e-1328.02L-ascorbate oxidase homolog OS=Brassica napus GN=B... [more]
LAC1_BOTFU5.406e-1329.78Laccase-1 OS=Botryotinia fuckeliana GN=lcc1 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionC03003A12SK OF2 Citrus clementina cDNA clone C03003A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291025 ID=CX291025; Name=CX291025; organism=Citrus clementina; type=EST; length=547bp
ACGAGTCGCCTTATAACATCACTATTCACTGGCATGGAATATTTCAGATT
CGAAGCATCTGGGCAGATGGACCAAACATGATAACTCAGTGTCCAATAAG
ACCTGGAAATAGCTACACTTACAAATTTAGAATCATCAATCAAGAAGGAA
CCCTTTGGTGGCATGCTCACATCTCAATGCTGCGAGCCACCGTCCACGGT
GCTTTTATCATCCGCCCTAAGTCTGGTCACAAGTATCCATTTCCTAAACC
CGATAAAGAAGTTCCCATTGTTCTCGGAGAGTGGTGGAATGACGATATCA
TGGATGTTGCCAACCGAGGGGAAATTACCGGTGTAGGTCCTAGAATTTCC
GATGCTTTCACCATCAATGGAAGGCCTGGAGACCTCTATCCCTGCTCGGA
AAATCAAACATACAAGCTTAAGGTTGAGAAAGGGAAGACCTATCTCCTAC
GTATTATCAACGCTGCACTCAATAACCAGCTCTTCTTCAAGATAGCCAAC
CACAAATTTACAGTCGTCGCCGTTGACGCTGGGTACACTGATCCCTA
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