CX291036
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 3.209e-61 Identity = 108/168 (64.29%), Postives = 123/168 (73.21%), Query Frame = 1 Query: 127 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKG 624 GG W A ATFY YGNLYSQGYGTNTAALST+LFN+G SCG+C+EIKCVNDPKWC PG ++ VTATNFC GGWCNPP+ HFDL+ PVF IA+YRAG+VP++YRRV C + GGIRFTINGH YFNLVLITNV GAGD+ S+KG Sbjct: 31 GGSWQTAHATFYGGNDASGTMGGACGYGNLYSQGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLVLITNVAGAGDIARTSVKG 198
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 4.191e-61 Identity = 106/168 (63.10%), Postives = 125/168 (74.40%), Query Frame = 1 Query: 127 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKG 624 GG W NA ATFY YGNLYSQGYG NTAALSTALFNNG SCG+C+EIKC +DP+WC+PG +I+VTATNFC GGWCNPP++HFDL+ P+F I YRAG+VPV+YRRVPC + GGIRFT+NG YFNLVL+TNV GAGD++ VS+KG Sbjct: 33 GGPWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWCNPPREHFDLAMPMFLKIGLYRAGIVPVSYRRVPCRKIGGIRFTVNGFRYFNLVLVTNVAGAGDINGVSVKG 200
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXPA2_ORYSJ (Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXPA2 PE=2 SV=2) HSP 1 Score: 230.335 bits (586), Expect = 6.052e-60 Identity = 103/165 (62.42%), Postives = 121/165 (73.33%), Query Frame = 1 Query: 130 GGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKG 624 G W +A ATFY YGNLYS GYGTNTAALST LFN+G +CGSCYE++C ND +WCLPG++ VTATN C GGWCNPP+ HFD+++P F I YRAG+VPV+YRRVPC ++GGIRFTINGHSYFNLVL+TNV G GDV +VSIKG Sbjct: 27 GSWQSAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTVLFNDGAACGSCYELRCDNDGQWCLPGSVTVTATNLCPPNYALPNDDGGWCNPPRPHFDMAEPAFLQIGVYRAGIVPVSYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGPGDVQSVSIKG 191
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXPA2_ARATH (Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 SV=2) HSP 1 Score: 229.18 bits (583), Expect = 1.348e-59 Identity = 102/170 (60.00%), Postives = 127/170 (74.71%), Query Frame = 1 Query: 115 HANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKG 624 +++ GGW ATFY YGNL+SQGYG TAALSTALFN+G CG+C+E++C +DP+WC+PG+I+V+ATNFC GGWCNPP +HFDL++P F IAQYRAG+VPVA+RRVPC + GGIRFTING+ YF+LVLITNVGGAGD+ AVS+KG Sbjct: 25 NSDDNGGWERGHATFYGGADASGTMGGACGYGNLHSQGYGLQTAALSTALFNSGQKCGACFELQCEDDPEWCIPGSIIVSATNFCPPNFALANDNGGWCNPPLKHFDLAEPAFLQIAQYRAGIVPVAFRRVPCEKGGGIRFTINGNPYFDLVLITNVGGAGDIRAVSLKG 194
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 1.761e-59 Identity = 107/173 (61.85%), Postives = 126/173 (72.83%), Query Frame = 1 Query: 118 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDP--KWCLPGT--IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKG 624 A GGG W +A ATFY YGNLYSQGYG N AALSTALFN+G SCG+C+EIKCVN P +WC PG+ I++TATNFC GGWCNPP+ HFDL+ P+F HIA+YRAG+VPV+YRRVPC ++GG+RFTING YFNLVLITNV GAGD+ S+KG Sbjct: 30 AYGGGEWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNNAALSTALFNSGQSCGACFEIKCVNQPGWEWCHPGSPSILITATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKKGGVRFTINGFRYFNLVLITNVAGAGDIVRASVKG 202
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2) HSP 1 Score: 226.868 bits (577), Expect = 6.692e-59 Identity = 103/168 (61.31%), Postives = 122/168 (72.62%), Query Frame = 1 Query: 127 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT--IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKG 624 GGGW A ATFY YGNLYSQGYG NTAALSTALFNNG SCG+C+E+KC +DPKWC G+ I +TATNFC GGWCNPP+ HFDL+ P+F IA+YRAG+VPV++RRVPC +RGGIRFTING YFNLVL+TNV GAG++ + +KG Sbjct: 28 GGGWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFELKCASDPKWCHSGSPSIFITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSFRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGNIVRLGVKG 195
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXPA5_ARATH (Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 8.740e-59 Identity = 109/173 (63.01%), Postives = 128/173 (73.99%), Query Frame = 1 Query: 115 HANGG--GGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKG 624 H GG G WINA ATFY YGNLYSQGYG TAALSTALF+ GLSCG+C+E+ CVNDP+WC+ G +I+VTATNFC GG C+PP HFDLSQP+++ IA Y++G++PV YRRV C R GGIRFTINGHSYFNLVL+TNVGGAGDVH+VS+KG Sbjct: 29 HHPGGHMGPWINAHATFYGGGDASGTMGGACGYGNLYSQGYGLETAALSTALFDQGLSCGACFELMCVNDPQWCIKGRSIVVTATNFCPP--------GGACDPPNHHFDLSQPIYEKIALYKSGIIPVMYRRVRCKRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSVSMKG 193
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXPA6_ORYSJ (Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXPA6 PE=2 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 4.060e-56 Identity = 101/170 (59.41%), Postives = 124/170 (72.94%), Query Frame = 1 Query: 124 GGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKW-CLPG--TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKG 624 G G W ATFY YGNLYSQGYGT+TAALSTALFN GLSCGSCYE++C D + CLPG T+ VTATNFC GGWCNPP++HFDL++P F IA++ AG+VPV++RRV C R+GG+RFT+NGH+YFNLVL+TNVGGAGDV ++++KG Sbjct: 24 GLGQWQPGHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNRGLSCGSCYELRCAGDHRRSCLPGGATVTVTATNFCPPNYALPSDGGGWCNPPRRHFDLAEPAFLRIARHAAGIVPVSFRRVACARKGGVRFTVNGHAYFNLVLVTNVGGAGDVRSLAVKG 193
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXP11_ORYSJ (Expansin-A11 OS=Oryza sativa subsp. japonica GN=EXPA11 PE=2 SV=2) HSP 1 Score: 216.853 bits (551), Expect = 6.925e-56 Identity = 103/169 (60.95%), Postives = 118/169 (69.82%), Query Frame = 1 Query: 118 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKG 624 A G GW + ATFY YGNLYS GYGT+TAALSTALFNNG SCG+C+E++C CL GT+ VTATN C GGWCNPP+ HFD+++P F IAQ RAGVVPV YRRV C ++GGIRFTI GHSYFNLVL+TNVGGAGDV AVS+KG Sbjct: 21 AGGDSGWSSGSATFYGGSDASGTMGGACGYGNLYSAGYGTSTAALSTALFNNGQSCGACFEVRCGGGGS-CLAGTVAVTATNLCPPNYALAGDAGGWCNPPRPHFDMAEPAFTRIAQARAGVVPVQYRRVACAKQGGIRFTITGHSYFNLVLVTNVGGAGDVTAVSVKG 188
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXP13_ORYSJ (Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2) HSP 1 Score: 205.297 bits (521), Expect = 2.085e-52 Identity = 91/167 (54.49%), Postives = 115/167 (68.86%), Query Frame = 1 Query: 133 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKG 624 GW+ A ATFY YGNLY+QGYGT TAALSTALFN+GL+CG CY++ C D WC PG ++ +TATNFC GGWCNPP+ HFD++QP ++ I YR G++PV Y+RVPC ++GG+RFTINGH YF LVL+TNVG AG + A+ +KG Sbjct: 33 GWVRAHATFYGGADASGTMGGACGYGNLYAQGYGTRTAALSTALFNDGLACGQCYKLVCDRKTDRTWCKPGVSVTITATNFCPPNWDLPSDSGGWCNPPRPHFDMAQPAWEKIGIYRGGIIPVIYQRVPCMKKGGVRFTINGHDYFQLVLLTNVGAAGSIKAMDVKG 199 The following BLAST results are available for this feature:
BLAST of CX291036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291036 ID=CX291036; Name=CX291036; organism=Citrus clementina; type=EST; length=626bpback to top |