CX291036
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2) HSP 1 Score: 202.601 bits (514), Expect = 1.351e-51 Identity = 92/163 (56.44%), Postives = 113/163 (69.33%), Query Frame = 1 Query: 136 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKG 624 W +ARATFY YG+L+ QGYG TAALSTALFN G +CG+CY+I CV+DP+WCLPGTI +TATNFC G WCNPPQ+HFDLS P+F IAQY+AGVVPV YRR+ C R GG++F G+ YF ++L NVGGAGD+ + +KG Sbjct: 55 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVHDPQWCLPGTIKITATNFC--PPDYSKTEGVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKG 215
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2) HSP 1 Score: 202.601 bits (514), Expect = 1.351e-51 Identity = 91/163 (55.83%), Postives = 113/163 (69.33%), Query Frame = 1 Query: 136 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKG 624 W +ARATFY YG+L+ QGYG TAALSTALFN G +CG+CY+I CVNDP+WCLPG++ +TATNFC G WCNPPQ+HFDLS P+F IAQY+AGVVPV YRR+ C R GG++F G+ YF ++L NVGGAGD+ + +KG Sbjct: 48 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVNDPQWCLPGSVKITATNFC--PPDYSKTEGVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKG 208
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 1.765e-51 Identity = 96/176 (54.55%), Postives = 120/176 (68.18%), Query Frame = 1 Query: 118 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVN----DPKWCLPG----TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIK 621 A G W +A ATFY YGN Y QGYGT+TAALS +F +GLSCG+C+E++C D + CLP +I+VTAT+ C GGWCNPP HFDLSQP F IA++++G+VPV+YRRV C R+GG+RFTINGHSYFNLVL++NVGGAGDVHAV++K Sbjct: 24 AAAAGRWTDAHATFYGGADASGTMGGACGYGNTYGQGYGTDTAALSAVMFGDGLSCGACFELRCGGGGGGDRRGCLPPAAGKSIVVTATDLCPANHALPGDRGGWCNPPLHHFDLSQPAFLRIARFQSGIVPVSYRRVACRRKGGMRFTINGHSYFNLVLVSNVGGAGDVHAVAVK 199
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2) HSP 1 Score: 200.29 bits (508), Expect = 6.707e-51 Identity = 91/163 (55.83%), Postives = 112/163 (68.71%), Query Frame = 1 Query: 136 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKG 624 W +ARATFY YGNL+ QGYG TAALSTALFN+G +CG+CYEI C DP+WCLPG++ +TATNFC WCNPPQ+HFDLS +F IA+Y+AGVVPV YRR+PC + GG++F G+ YF +VLI NVGGAGD+ V +KG Sbjct: 52 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKG 212
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXPA8_ORYSJ (Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXPA8 PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.144e-50 Identity = 97/165 (58.79%), Postives = 111/165 (67.27%), Query Frame = 1 Query: 136 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC-VNDPKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKG 624 W A ATFY YG+LY GYGT TAALSTALFN G SCG+C+ I C +WC PGT I VTATNFC GGWCNPP++HFD+SQP ++ IA YRAG+VPV YRRVPC R GGIRF +NGHSYF LVL+TNVGG+G V + IKG Sbjct: 25 WTPAFATFYGGSDASGTMGGACGYGDLYGAGYGTRTAALSTALFNGGASCGACFTIACDTRKTQWCKPGTSITVTATNFCPPNYALSGDAGGWCNPPRRHFDMSQPAWETIAVYRAGIVPVNYRRVPCQRSGGIRFAVNGHSYFELVLVTNVGGSGAVAQMWIKG 189
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2) HSP 1 Score: 197.978 bits (502), Expect = 3.329e-50 Identity = 90/162 (55.56%), Postives = 111/162 (68.52%), Query Frame = 1 Query: 136 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIK 621 W +ARATFY YGNL+ QGYG TAALSTALFN+G +CG+CYEI C DP+WCLPG++ +TATNFC WCNPPQ+HFDLS +F IA+Y+AGVVPV YRR+PC + GG++F G+ YF +VLI NVGGAGD+ V +K Sbjct: 58 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVK 217
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXP22_ORYSJ (Expansin-A22 OS=Oryza sativa subsp. japonica GN=EXPA22 PE=2 SV=2) HSP 1 Score: 197.593 bits (501), Expect = 4.347e-50 Identity = 89/166 (53.61%), Postives = 112/166 (67.47%), Query Frame = 1 Query: 136 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVND--PKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKG 624 W+ A ATFY YG+LYSQGYGT AALSTALFN+G SCG CY+I C P+WC PG T+ +TATNFC GGWCNPP+ HFD++QP ++ I YRAG++PV Y+RVPC ++GG+RFTINGH YFNLVL+TNV G + ++ + G Sbjct: 52 WLKAHATFYGGADASGTMGGACGYGDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCRPGVTVTITATNFCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVIYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGLIKSMDVMG 217
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXP24_ARATH (Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=2 SV=2) HSP 1 Score: 196.823 bits (499), Expect = 7.416e-50 Identity = 92/164 (56.10%), Postives = 113/164 (68.90%), Query Frame = 1 Query: 133 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKG 624 GW + RATFY YG+L+ QGYG TAALSTALFNNG CG+CYEI C + P+WCLPG+I +TATNFC WCNPPQ+HFDLSQP+F IA+Y+AGVVPV +RRVPC + GG++F I G+ +F ++L NVGGAG V A+ IKG Sbjct: 89 GWGHGRATFYGDINGGETQQGACGYGDLHKQGYGLETAALSTALFNNGSRCGACYEIMCEHAPQWCLPGSIKITATNFCPPDFTKPND--NWCNPPQKHFDLSQPMFLKIAKYKAGVVPVKFRRVPCAKIGGVKFEIKGNPHFLMILPYNVGGAGAVRAMQIKG 250
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXP23_ORYSJ (Expansin-A23 OS=Oryza sativa subsp. japonica GN=EXPA23.1 PE=2 SV=2) HSP 1 Score: 196.823 bits (499), Expect = 7.416e-50 Identity = 89/166 (53.61%), Postives = 110/166 (66.27%), Query Frame = 1 Query: 136 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVND--PKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKG 624 W A ATFY YGNLYSQGYGT AALSTALFN+G SCG CY+I C P+WC PG T+ +TATNFC GGWCNPP+ HFD++QP ++ I Y AG++PV Y+RVPC ++GG+RFTINGH YF LVL+TNV AG + ++ + G Sbjct: 39 WQKAHATFYGGADASGTMGGACGYGNLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTITATNFCPPNWNLPSDNGGWCNPPRPHFDMAQPAWEKIGVYSAGIIPVIYQRVPCVKKGGLRFTINGHDYFQLVLVTNVAAAGSIKSMEVMG 204
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXP24_ORYSJ (Expansin-A24 OS=Oryza sativa subsp. japonica GN=EXPA24 PE=2 SV=2) HSP 1 Score: 196.438 bits (498), Expect = 9.685e-50 Identity = 90/166 (54.22%), Postives = 111/166 (66.87%), Query Frame = 1 Query: 136 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVND--PKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKG 624 W+ A ATFY Y +LYSQGYGT AALSTALFN+G SCG CY+I C P+WC PG T+ VTATNFC GGWCNPP+ HFD++QP ++ I YRAG++PV Y+RVPC ++GG+RFTINGH YFNLVL+TNV G + ++ I G Sbjct: 50 WLKAHATFYGGADASGTMGGACGYVDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTVTATNFCPPNWNLPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVMYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGSIKSMDIMG 215 The following BLAST results are available for this feature:
BLAST of CX291036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291036 ID=CX291036; Name=CX291036; organism=Citrus clementina; type=EST; length=626bpback to top |