CX291036
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXP17_ARATH (Putative expansin-A17 OS=Arabidopsis thaliana GN=EXPA17 PE=2 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 9.685e-50 Identity = 92/167 (55.09%), Postives = 113/167 (67.66%), Query Frame = 1 Query: 133 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKG 624 GW+ A ATFY YGNLY+ GY TNTAALSTALFN+G SCG CY+I C P+WCL G +I +TATNFC GGWCNPP+ HFD++QP F IA+Y+AG+VP+ Y++V C R GG+RFTING +YF LVLI+NV G G++ V IKG Sbjct: 27 GWLQAHATFYGGSDASGTMGGACGYGNLYTDGYKTNTAALSTALFNDGKSCGGCYQILCDATKVPQWCLKGKSITITATNFCPPNFAQASDNGGWCNPPRPHFDMAQPAFLTIAKYKAGIVPILYKKVGCRRSGGMRFTINGRNYFELVLISNVAGGGEISKVWIKG 193
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXP29_ORYSJ (Expansin-A29 OS=Oryza sativa subsp. japonica GN=EXPA29 PE=2 SV=2) HSP 1 Score: 195.282 bits (495), Expect = 2.158e-49 Identity = 90/172 (52.33%), Postives = 111/172 (64.53%), Query Frame = 1 Query: 118 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVN--DPKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKG 624 A GW ATFY YGNLY+QGYGT TAALSTALF++G SCG CY + C DP+WC G ++ VTATNFC GGWCNPP+ HFD++QP ++ I YR G+VPVA+RRVPC RRGG+RFT+ G YF LVL+TNV AG V ++ ++G Sbjct: 28 AFAASGWSKGTATFYGGSDASGTMGGACGYGNLYTQGYGTRTAALSTALFDDGASCGQCYALTCDARADPRWCRAGASVTVTATNFCPPNYALPSDDGGWCNPPRPHFDMAQPAWERIGVYRGGIVPVAFRRVPCRRRGGVRFTVAGRDYFELVLVTNVAAAGSVRSMEVRG 199
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXP14_ORYSJ (Expansin-A14 OS=Oryza sativa subsp. japonica GN=EXPA14 PE=2 SV=2) HSP 1 Score: 194.897 bits (494), Expect = 2.818e-49 Identity = 89/166 (53.61%), Postives = 110/166 (66.27%), Query Frame = 1 Query: 136 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVND--PKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKG 624 W A ATFY YG+LYSQGYGT AALSTALFN+G SCG CY+I C P+WC PG T+ +TATNFC GGWCNPP+ HFD++QP ++ I Y AG++PV Y+RVPC ++GG+RFTINGH YFNLVL+TNV G + ++ I G Sbjct: 34 WQKAHATFYGGADASGTMGGGCGYGDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTITATNFCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKIGIYSAGIIPVIYQRVPCIKKGGVRFTINGHDYFNLVLVTNVATTGSIKSMDIMG 199
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXP28_ORYSJ (Expansin-A28 OS=Oryza sativa subsp. japonica GN=EXPA28 PE=2 SV=2) HSP 1 Score: 194.126 bits (492), Expect = 4.807e-49 Identity = 91/172 (52.91%), Postives = 112/172 (65.12%), Query Frame = 1 Query: 118 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKG 624 A GGW++ ATFY YGNLY+QGYG AALSTALFN G SCG CY I C P+WC GT + +TATN C GGWCNPP+ HFD+SQP ++ I YRAG+VPV Y++V C R+GG+RFT++G +YF LVLITNV G+G V A+S+KG Sbjct: 21 AAAAGGWVSGTATFYGGKDASGTMGGACGYGNLYTQGYGVYNAALSTALFNGGASCGQCYLIMCDASKTPEWCKAGTAVTITATNLCPPNWALANDDGGWCNPPRPHFDMSQPAWETIGIYRAGIVPVLYQQVKCWRQGGVRFTVSGFNYFELVLITNVAGSGSVQAMSVKG 192
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 4.807e-49 Identity = 90/164 (54.88%), Postives = 113/164 (68.90%), Query Frame = 1 Query: 139 INARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC-VNDPKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKG 624 ++ ATFY YGNLYS GYGTNTAALS+ALFN+G +CG CY+I C ++ KWC GT + +TATN C GGWCNPP+QHFD++QP ++ I YR G+VPV ++RV C R+GG+RFTING+SYF LVLITNVGG G + +V IKG Sbjct: 25 LSGTATFYGGSDASGTMGGACGYGNLYSTGYGTNTAALSSALFNDGAACGECYQITCDQSNSKWCKAGTSVTITATNLCPPDYSKPSNDGGWCNPPRQHFDMAQPAWEQIGVYRGGIVPVNFQRVSCTRKGGVRFTINGNSYFELVLITNVGGPGSIKSVQIKG 188
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2) HSP 1 Score: 190.66 bits (483), Expect = 5.314e-48 Identity = 89/167 (53.29%), Postives = 110/167 (65.87%), Query Frame = 1 Query: 133 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKG 624 GW A ATFY YG+LYS GYGTNTAALST LFN+G SCG CY I C D ++C+ GT + +TATN C GGWCNPP+QHFD+++P + I Y G+VPV Y+RVPC ++GG+RFTING YF LVL++NVGG G + +VSIKG Sbjct: 33 GWNKAFATFYGGSDASGTMGGACGYGDLYSTGYGTNTAALSTVLFNDGASCGQCYRIMCDYQADRRFCISGTSVTITATNLCPPNYALPNDAGGWCNPPRQHFDMAEPAWLKIGVYVGGIVPVMYQRVPCAKQGGVRFTINGRDYFELVLVSNVGGVGSIQSVSIKG 199
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXP27_ORYSJ (Putative expansin-A27 OS=Oryza sativa subsp. japonica GN=EXPA27 PE=3 SV=2) HSP 1 Score: 189.889 bits (481), Expect = 9.065e-48 Identity = 90/166 (54.22%), Postives = 107/166 (64.46%), Query Frame = 1 Query: 136 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDP--KWCLP-GTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKG 624 WI A ATFY YGNLY QGYG AALSTALFN+G +CG CY I C D +WC P G + VTATN C GGWCNPP++HFD+SQP ++ I YRAG+VPV YRRV C RRGG+RFT+ G +F LVL+ NV G+G V AVS++G Sbjct: 27 WIPATATFYGGNDGSGTMGGACGYGNLYDQGYGLENAALSTALFNDGAACGQCYLIVCDTDKAGRWCKPRGAVTVTATNLCPPNWALPSDGGGWCNPPRRHFDMSQPAWERIGVYRAGIVPVLYRRVRCWRRGGVRFTVGGFDHFELVLVANVAGSGSVAAVSVRG 192
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2) HSP 1 Score: 188.734 bits (478), Expect = 2.019e-47 Identity = 85/167 (50.90%), Postives = 112/167 (67.07%), Query Frame = 1 Query: 133 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVN--DPKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKG 624 GW + ATFY YGNLY GYGTNTAALS+ALFN+G SCG CY+I C + +P+WCL G T+ +T TN C GGWCNPP+ HFD+++P + I Y+AG+VPV Y+RVPC ++GG+RFT+ G +YF LVLI+NV G+G + +V +KG Sbjct: 31 GWSSGTATFYGGSDASGTMGGACGYGNLYWSGYGTNTAALSSALFNDGASCGQCYQIACDHQAEPRWCLQGRTVTITGTNLCPPNYALSSNDGGWCNPPRTHFDMAEPAWLQIGIYKAGIVPVLYQRVPCVKQGGVRFTMGGFNYFELVLISNVAGSGSIQSVWVKG 197
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2) HSP 1 Score: 187.578 bits (475), Expect = 4.499e-47 Identity = 90/164 (54.88%), Postives = 110/164 (67.07%), Query Frame = 1 Query: 142 NARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC-VNDPKWCLPG--TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKG 624 +A ATFY YGNLY+ GYG AALS+ALFN+G CG+CY I C + KWC PG +I +TATN C GGWCNPP+QHFD+SQP +++IA Y+AG+VPV Y+RVPC R GGIRF I+GH YF LV +TNVGG+G V +SIKG Sbjct: 30 SAFATFYGGKDGSGTMGGACGYGNLYNAGYGLYNAALSSALFNDGAMCGACYTITCDTSQTKWCKPGGNSITITATNLCPPNWALPSNSGGWCNPPRQHFDMSQPAWENIAVYQAGIVPVNYKRVPCQRSGGIRFAISGHDYFELVTVTNVGGSGVVAQMSIKG 193
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXP11_ARATH (Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=2 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 4.499e-47 Identity = 89/167 (53.29%), Postives = 110/167 (65.87%), Query Frame = 1 Query: 133 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVN--DPKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKG 624 G N ATFY YG+LYS GYGT TAALSTALFN+G SCG CY I C + D +WCL G ++++TATNFC GGWCNPP +HFD++QP ++ I YR G+VPV ++RV C ++GG+RF ING YF LV I NVGGAG + +VSIKG Sbjct: 25 GLTNGHATFYGGSDASGTMGGACGYGDLYSAGYGTMTAALSTALFNDGASCGECYRITCDHAADSRWCLKGASVVITATNFCPPNFALPNNNGGWCNPPLKHFDMAQPAWEKIGIYRGGIVPVVFQRVSCYKKGGVRFRINGRDYFELVNIQNVGGAGSIKSVSIKG 191 The following BLAST results are available for this feature:
BLAST of CX291036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291036 ID=CX291036; Name=CX291036; organism=Citrus clementina; type=EST; length=626bpback to top |