CX291036
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXP33_ORYSJ (Expansin-A33 OS=Oryza sativa subsp. japonica GN=EXPA33 PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 3.809e-46 Identity = 89/165 (53.94%), Postives = 107/165 (64.85%), Query Frame = 1 Query: 136 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC-VNDPKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKG 624 W A ATFY YGNLY+ GYG N AALS+ALFN+G CG+CY I C + WC PGT I +TATN C GGWCNPP++HFD+SQP + IA Y+AG+VPV ++RVPC + GGIRFTI+G YF LV + NVGG+G V VSIKG Sbjct: 23 WTPATATFYGGSDGAGTMGGACGYGNLYNAGYGLNNAALSSALFNDGAMCGACYTIACDTSQSTWCKPGTSITITATNLCPPNYAKKSDAGGWCNPPRKHFDMSQPAWTSIAIYQAGIVPVNFKRVPCQKSGGIRFTISGRDYFELVTVFNVGGSGVVAQVSIKG 187
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 3.809e-46 Identity = 88/176 (50.00%), Postives = 110/176 (62.50%), Query Frame = 1 Query: 115 HANGG----GGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT--IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKG 624 H N G G W A ATFY Y + +GYG T A+ST LF G CG+CYE+KCV+ P C G ++VTATN C GGWCNPP++HFDLS P F IAQ +AG+VP++YRRVPC + GGIR+TI G+ YFNLV+++NVGGAGDV +S+KG Sbjct: 31 HRNHGKFTAGPWKQAHATFYGGRDGSGTLDGACGYKDTSKEGYGVQTVAVSTPLFGAGAGCGACYEVKCVDSPDGCKVGAAPLVVTATNLCPPNPGQSNDNGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVPCVKVGGIRYTITGNPYFNLVMVSNVGGAGDVAGLSVKG 206
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2) HSP 1 Score: 181.03 bits (458), Expect = 4.211e-45 Identity = 85/165 (51.52%), Postives = 107/165 (64.85%), Query Frame = 1 Query: 136 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC-VNDPKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKG 624 W +A ATFY YGN+YS GYGTNT ALS+AL+ +G SCG+CY + C + +WC GT + VTATN+C GGWCNPP++HFD+SQP ++ IA Y +G+VPV Y R PC R GGIRF I GH Y+ LVL+TNV G+G V A +KG Sbjct: 27 WTSATATFYGGSDASGTMGGSCGYGNMYSAGYGTNTTALSSALYGDGASCGACYLVTCDASATRWCKNGTSVTVTATNYCPPNYSESGDAGGWCNPPRRHFDMSQPAWEAIAVYSSGIVPVRYARTPCRRVGGIRFGIAGHDYYELVLVTNVAGSGAVAAAWVKG 191
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2) HSP 1 Score: 180.259 bits (456), Expect = 7.183e-45 Identity = 88/166 (53.01%), Postives = 105/166 (63.25%), Query Frame = 1 Query: 136 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVND--PKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKG 624 W A ATFY YGNLY QGYG + AALS ALFN+G SCG CY I C P+WC GT + VTATN C GGWCNPP+ HFD+SQP ++ I Y+AG+VPV Y+RV C R+GG+RFT+ G +YF LVLITNV G+G V + IKG Sbjct: 28 WSPATATFYGGSDGSGTMGGACGYGNLYDQGYGVDNAALSQALFNDGASCGQCYLIVCDTSRAPQWCKAGTAVTVTATNLCPPNWALPSDGGGWCNPPRPHFDMSQPAWEQIGVYQAGIVPVLYQRVRCWRQGGVRFTVAGLNYFELVLITNVAGSGSVASAWIKG 193
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXP25_ORYSJ (Expansin-A25 OS=Oryza sativa subsp. japonica GN=EXPA25 PE=2 SV=2) HSP 1 Score: 179.104 bits (453), Expect = 1.600e-44 Identity = 82/167 (49.10%), Postives = 107/167 (64.07%), Query Frame = 1 Query: 133 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKG 624 GW ATFY YGNLY+ GYGTNTAALS+ LFN+G SCG CY I C P+WC G + +TATN C GGWCNPP+ HFD+++P + I Y+AG++PV Y++V C R+GGIRFT+ G ++F LVL++NV G+G V +VS+KG Sbjct: 26 GWNKGTATFYGGADASGTMGGACGYGNLYTAGYGTNTAALSSVLFNDGWSCGQCYLIMCDAAATPQWCRAGAAVTITATNLCPPNWALPSNSGGWCNPPRPHFDMAEPAWLQIGIYKAGIIPVLYQQVKCWRQGGIRFTMGGFNFFELVLVSNVAGSGSVRSVSVKG 192
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 3.565e-44 Identity = 79/165 (47.88%), Postives = 105/165 (63.64%), Query Frame = 1 Query: 130 GGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKG 624 G W A ATFY YGNL++ GYG +TAALST LFN+G CG C++I C P + +VTATN C GGWCNPP+ HFD+++P F +A +RAG++PVAYRRVPC R GG+RF G+SY+ L+ + NVGGAGD+ ++++KG Sbjct: 35 GPWRYAHATFYGDETGGETMGGACGYGNLFNSGYGLSTAALSTTLFNDGYGCGQCFQITCSKSPHCYSGKSTVVTATNLCPPNWYQDSNAGGWCNPPRTHFDMAKPAFMKLAYWRAGIIPVAYRRVPCQRSGGMRFQFQGNSYWLLIFVMNVGGAGDIKSMAVKG 199
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2) HSP 1 Score: 172.17 bits (435), Expect = 1.956e-42 Identity = 85/167 (50.90%), Postives = 104/167 (62.28%), Query Frame = 1 Query: 133 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVND--PKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKG 624 GW+ ATFY YGNLY QGYG N AALST LFNNG SCG CY I C D P C GT I VT TNFC GGWCN + HFD+SQP +++I Y AG+VP+ Y++V C R GG+RFTI G +YF LVL+TN+ G+G + ++S+KG Sbjct: 22 GWLQGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNNGASCGQCYLIICNYDKAPSGCRMGTAITVTGTNFCPPNYDLPY--GGWCNTTRPHFDMSQPAWENIGIYSAGIVPILYQQVKCWRSGGVRFTITGLNYFELVLVTNMAGSGSIASMSVKG 186
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXP18_ARATH (Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 2.555e-42 Identity = 80/168 (47.62%), Postives = 104/168 (61.90%), Query Frame = 1 Query: 127 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT--IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKG 624 G W A ATFY YGN+Y GYG T ALSTALFN G +CG C+++KCV+ P C G+ +VTATN C GGWCNPP+ HFDL++P F IA ++AG++PV+YRRV C + GGIRF G+ Y+ LV + NVGG GD+ +++KG Sbjct: 28 GTPWRTASATFYGDDTGSATMGGACGYGNMYDSGYGVATTALSTALFNEGYACGQCFQLKCVSSPN-CYYGSPATVVTATNICPPNYGQASNNGGWCNPPRVHFDLTKPAFMKIANWKAGIIPVSYRRVACKKIGGIRFKFEGNGYWLLVYVMNVGGPGDIKTMAVKG 194
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.656e-41 Identity = 81/166 (48.80%), Postives = 103/166 (62.05%), Query Frame = 1 Query: 136 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKG 624 W+ ATFY YGNLY QGYG N AALST LFN+G SCG CY I C P WC G I VT TN+C GGWCN + HFD+SQP +++I Y AG++P+ Y++V C R GG+RFTING +YF LVL+TN+ G+G + ++S+KG Sbjct: 23 WLPGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNDGASCGQCYLIICDYSKAPDWCKLGKAITVTGTNYCPPNYDLPY--GGWCNATRPHFDMSQPAWENIGIYNAGIIPILYQQVKCWRYGGVRFTINGFNYFELVLVTNMAGSGSIASMSVKG 186
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 6.292e-41 Identity = 82/166 (49.40%), Postives = 102/166 (61.45%), Query Frame = 1 Query: 136 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT--IMVTATNFCXXXXXXXXXXGG--WCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIK 621 W A ATFY YGNLY+ GYGT+TAALST LF +G CG+CY+++CV C G+ I VTATN C GG WCNPP+ HFDLS+P F +A +RAG+VPV YRRVPC R GG+RF + G+ Y+ L + NV GAGDV + +K Sbjct: 37 WTPAHATFYGDETASETMGGACGYGNLYASGYGTDTAALSTTLFKDGYGCGTCYQMRCVGTAS-CYRGSPAITVTATNLCPPNWAEDPDRGGGGWCNPPRAHFDLSKPAFMRMADWRAGIVPVMYRRVPCARAGGLRFALQGNPYWLLAYVMNVAGAGDVGDMWVK 201 The following BLAST results are available for this feature:
BLAST of CX291036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX291036 ID=CX291036; Name=CX291036; organism=Citrus clementina; type=EST; length=626bpback to top |