CX291036
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXPB5_ORYSJ (Expansin-B5 OS=Oryza sativa subsp. japonica GN=EXPB5 PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 5.551e-13 Identity = 53/174 (30.46%), Postives = 76/174 (43.68%), Query Frame = 1 Query: 127 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQG-YGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQ-------YRAGVVPVAYRRVPCGRRGGIRFTINGHS--YFNLVLITNVGGAGDVHAVSI 618 G GW + AT+Y Y + Q + + AA +LF NG CGSCY+IKC + + C + V T+ C GG C HFD+S F +A AGV+ + Y+RVPC + F ++ S Y+ +L+ G GD+ AV I Sbjct: 42 GYGWSSGGATWYGGPQGDGSEGGACGYQSAVGQRPFSSMIAAGGPSLFKNGKGCGSCYQIKCTGN-RACSGRPVTVVITDSC---------PGGVCLNEAAHFDMSGTAFGAMANRGMGDRLRSAGVLKIQYKRVPCRFAMNVAFKVDAGSNPYYLAILVQYANGDGDLAAVHI 205
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXPB7_ORYSJ (Expansin-B7 OS=Oryza sativa subsp. japonica GN=EXPB7 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.250e-13 Identity = 53/178 (29.78%), Postives = 79/178 (44.38%), Query Frame = 1 Query: 124 GGGGWINARATFYXXXXXXXXXXXXXXYG--NLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWC-LPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQ-------YRAGVVPVAYRRVPCGRRG-GIRFTI--NGHSYFNLVLITNVGGAGDVHAVSI 618 GGGGW+NARAT+Y G N+ + T+ + LF +G CGSCY+I+CV P LP T+++T N+ HFDLS F +A+ AG++ + +RRVPC G + F + + + +L+ G GDV V + Sbjct: 88 GGGGWLNARATWYGAPNGAGPDDNGGACGFKNVNLPPFSAMTSCGNEPLFKDGKGCGSCYQIRCVGHPACSGLPETVIITDMNYYPVSL--------------YHFDLSGTAFGAMAKDNRNDELRHAGIIDIQFRRVPCQYPGLTVTFHVEQGSNPVYMAILVEYENGDGDVVQVDL 251
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXB15_ORYSJ (Expansin-B15 OS=Oryza sativa subsp. japonica GN=EXPB15 PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 8.015e-12 Identity = 52/173 (30.06%), Postives = 77/173 (44.51%), Query Frame = 1 Query: 136 WINARATFYXXXXXXXXXXXXXXY-GNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIA------QYR-AGVVPVAYRRVPCGRRGGIRFT----INGHSYFNLVLITNVGGAGDVHAVSI 618 W N AT+Y Y G ++ + + AA S +++ +GL CGSCY++KC + C + V T+ C GG C HFDLS F +A Q R AGV+ + Y RVPC GG++ T + + + VL+ G GD+ V + Sbjct: 37 WSNGGATWYGAANGAGSDGGACGYQGAVFQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCTGNSA-CSGNPVTVVLTDEC---------PGGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPC-NWGGVKLTFVVDVGSNPNYFAVLVKYENGDGDLSGVEL 198
BLAST of CX291036 vs. ExPASy Swiss-Prot
Match: EXPB3_ARATH (Expansin-B3 OS=Arabidopsis thaliana GN=EXPB3 PE=2 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 8.862e-11 Identity = 50/173 (28.90%), Postives = 75/173 (43.35%), Query Frame = 1 Query: 136 WINARATFYXXXXXXXXXXXXXXYGNLYS-QGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIA-------QYRAGVVPVAYRRVPCGRRG-GIRFTINGHS--YFNLVLITNVGGAGDVHAVSIK 621 W+ A AT+Y YG L + A++ LF NG CG+CY+++C+ D C + V T+ C C+ HFDLS VF +A G++PV YRR C RG I F +N S ++ +L+ G GD+ ++ I+ Sbjct: 36 WLPAVATWYGSPNGDGSDGGACGYGTLVDVKPLHARVGAVNPILFKNGEGCGACYKVRCL-DKSICSRRAVTVIITDECPG-----------CSKTSTHFDLSGAVFGRLAIAGESGPLRNRGLIPVIYRRTACKYRGKNIAFHVNEGSTDFWLSLLVEFEDGEGDIGSMHIR 196 The following BLAST results are available for this feature:
BLAST of CX291036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291036 ID=CX291036; Name=CX291036; organism=Citrus clementina; type=EST; length=626bpback to top |