CX291037

Overview
NameCX291037
Unique NameCX291037
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length544
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291037 vs. ExPASy Swiss-Prot
Match: Y210_RICTY (Uncharacterized zinc protease RT0210 OS=Rickettsia typhi GN=RT0210 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.387e-21
Identity = 50/152 (32.89%), Postives = 84/152 (55.26%), Query Frame = 3
Query:    6 LEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSADPTTA 461
            + EE +++GG+ NAYT  E T YY +VL ++ + AL+ILADI+QNS F    I++E  +I++           +I++  + T ++  PLG++ILG A+ +   T+EH  N+I  HY A  + ++ +G             LF  L    T++
Sbjct:   67 IAEEFDSIGGYFNAYTGYENTVYYVRVLSENCHKALNILADIIQNSIFADEEISKEYQIIMQEIAHHHDNPDDLIYETFYNTVYKDQPLGKSILGTAKTLVKFTQEHFLNFIGKHYNAENLYLSIAGNIEHNKIVIIAEELFASLKQGVTSS 218          
BLAST of CX291037 vs. ExPASy Swiss-Prot
Match: Y522_RICBR (Uncharacterized zinc protease RBE_0522 OS=Rickettsia bellii (strain RML369-C) GN=RBE_0522 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 4.072e-21
Identity = 48/146 (32.88%), Postives = 81/146 (55.48%), Query Frame = 3
Query:    6 LEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLS 443
            + EE +++GGH NAYT  E+T YY++VL ++ N AL I+ADI+QNS F +  I +E  VIL+           ++++  + + F+  PLG+ ILG ++ I+T  ++H   +   HY A    ++ +G             LF+ L+
Sbjct:   67 IAEEFDSIGGHFNAYTGHEKTVYYSRVLSENCNKALAIIADIVQNSAFAEEEIAKEYQVILQEIAHAQDNPDDLVYEKFYNSVFKDQPLGKPILGTSKTIETFNRDHFLKFTGKHYNAENFYLSIAGNVDHEEIVKEAERLFSSLT 212          
BLAST of CX291037 vs. ExPASy Swiss-Prot
Match: UCR1_CAEEL (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Caenorhabditis elegans GN=ucr-1 PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 2.639e-20
Identity = 57/176 (32.39%), Postives = 90/176 (51.14%), Query Frame = 3
Query:    6 LEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSADPTTASQLVANEPAIFTGSEVRIIDDDIP 533
            LE E+  +G  LN++T R+QT  + +   +DV   +DILAD+L+NS  + + I  ER  +L+           V+FD LHA  FQ TPL  ++LG +++I  I+ + L+ +   HY   RMV++A G                  +  P    Q+   +   FTGSE R  +D++P
Sbjct:   99 LESELNAIGAKLNSFTERDQTAVFVQAGAQDVEKVVDILADVLRNSKLEASTIDTERVNLLKELEASDDYHQLVLFDMLHAAGFQGTPLALSVLGTSESIPNISAQQLKEWQEDHYRPVRMVLSAVGGGVSNVSSLADKYFGDLSNEYPRKVPQV---DGTRFTGSEYRYRNDNVP 271          
BLAST of CX291037 vs. ExPASy Swiss-Prot
Match: YMXG_BACSU (Uncharacterized zinc protease ymxG OS=Bacillus subtilis GN=ymxG PE=3 SV=3)

HSP 1 Score: 95.5153 bits (236), Expect = 1.711e-19
Identity = 45/128 (35.16%), Postives = 75/128 (58.59%), Query Frame = 3
Query:    3 DLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASG 386
            ++ E  + +GG +NA+TS+E T YYAKVLD+  N ALD+LAD+  +STFD+  + +E++V+             ++ D L    +    LG  ILG  + + +   + L+ Y+H +YT  R+VI+ +G
Sbjct:   63 EIAESFDRIGGQVNAFTSKEYTCYYAKVLDEHANYALDVLADMFFHSTFDENELKKEKNVVYEEIKMYEDAPDDIVHDLLSKATYGNHSLGYPILGTEETLASFNGDSLRQYMHDYYTPDRVVISVAG 190          
BLAST of CX291037 vs. ExPASy Swiss-Prot
Match: Y2805_MYCBO (Uncharacterized zinc protease Mb2805c OS=Mycobacterium bovis GN=Mb2805c PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.091e-17
Identity = 45/128 (35.16%), Postives = 73/128 (57.03%), Query Frame = 3
Query:    3 DLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASG 386
            D+ + ++ +GG LNA+T++E T YYA VL  D+  A+D++AD++ N       +  ERDV+L             + D   A  F   P+GR ++G AQ++  +T+  LQ++    YT  RMV+AA+G
Sbjct:   76 DIAQAMDAVGGELNAFTAKEHTCYYAHVLGSDLPLAVDLVADVVLNGRCAADDVEVERDVVLEEIAMRDDDPEDALADMFLAALFGDHPVGRPVIGSAQSVSVMTRAQLQSFHLRRYTPERMVVAAAG 203          
BLAST of CX291037 vs. ExPASy Swiss-Prot
Match: Y2782_MYCTU (Uncharacterized zinc protease Rv2782c/MT2852 OS=Mycobacterium tuberculosis GN=Rv2782c PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.091e-17
Identity = 45/128 (35.16%), Postives = 73/128 (57.03%), Query Frame = 3
Query:    3 DLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASG 386
            D+ + ++ +GG LNA+T++E T YYA VL  D+  A+D++AD++ N       +  ERDV+L             + D   A  F   P+GR ++G AQ++  +T+  LQ++    YT  RMV+AA+G
Sbjct:   76 DIAQAMDAVGGELNAFTAKEHTCYYAHVLGSDLPLAVDLVADVVLNGRCAADDVEVERDVVLEEIAMRDDDPEDALADMFLAALFGDHPVGRPVIGSAQSVSVMTRAQLQSFHLRRYTPERMVVAAAG 203          
BLAST of CX291037 vs. ExPASy Swiss-Prot
Match: Y855_MYCLE (Uncharacterized zinc protease ML0855 OS=Mycobacterium leprae GN=ML0855 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.038e-16
Identity = 43/128 (33.59%), Postives = 71/128 (55.47%), Query Frame = 3
Query:    3 DLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASG 386
            D+ + I+ +GG LNA+T++E T YYA VLD D+  A+D++AD++ N       +  ERDV+L             + D   A  F   P+GR ++G  +++  +T+  L ++    YT  RMV+A +G
Sbjct:   83 DIAQAIDAVGGELNAFTAKEHTCYYAHVLDSDLELAVDLVADVVLNGRCAVDDVELERDVVLEEIAMRDDDPEDALGDMFLAALFGDHPVGRPVIGTMESVSAMTRTQLHSFHVRRYTPERMVVAVAG 210          
BLAST of CX291037 vs. ExPASy Swiss-Prot
Match: Y5738_STRCO (Uncharacterized zinc protease SCO5738 OS=Streptomyces coelicolor GN=SCO5738 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 5.151e-16
Identity = 46/158 (29.11%), Postives = 74/158 (46.84%), Query Frame = 3
Query:    3 DLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSADPTTASQLVA 476
            D+   I+ +GG +NA+T++E T YYA+VLD D+  A+D++ D+L  S   +  +  ER  IL             + D    T F    LGR +LG    +  +T + ++ +   HY    +V+AA+G              F K  A    A+Q +A
Sbjct:   96 DISSAIDAVGGEMNAFTAKEYTCYYARVLDTDLPLAIDVVCDMLTGSLIQEEDVDVERGAILEEIAMTEDDPGDCVHDLFAHTMFGDNALGRPVLGTVDTVNALTADRIRRFYRKHYDPTHLVVAAAGNVDHNKVVRQVRAAFEKSGALKDPAAQPLA 253          
The following BLAST results are available for this feature:
BLAST of CX291037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
Y210_RICTY2.387e-2132.89Uncharacterized zinc protease RT0210 OS=Rickettsia... [more]
Y522_RICBR4.072e-2132.88Uncharacterized zinc protease RBE_0522 OS=Ricketts... [more]
UCR1_CAEEL2.639e-2032.39Cytochrome b-c1 complex subunit 1, mitochondrial O... [more]
YMXG_BACSU1.711e-1935.16Uncharacterized zinc protease ymxG OS=Bacillus sub... [more]
Y2805_MYCBO2.091e-1735.16Uncharacterized zinc protease Mb2805c OS=Mycobacte... [more]
Y2782_MYCTU2.091e-1735.16Uncharacterized zinc protease Rv2782c/MT2852 OS=My... [more]
Y855_MYCLE1.038e-1633.59Uncharacterized zinc protease ML0855 OS=Mycobacter... [more]
Y5738_STRCO5.151e-1629.11Uncharacterized zinc protease SCO5738 OS=Streptomy... [more]

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Properties
Property NameValue
Genbank descriptionC03003C03SK OF2 Citrus clementina cDNA clone C03003C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291037 ID=CX291037; Name=CX291037; organism=Citrus clementina; type=EST; length=544bp
GAGATTTGGAGGAGGAGATCGAGAATATGGGGGGGCATTTGAATGCTTAC
ACTAGCAGGGAACAGACGACCTATTATGCCAAGGTGTTGGATAAGGATGT
GAATAATGCTTTGGATATTTTGGCTGATATTTTGCAGAACTCGACGTTTG
ATCAAGCGAGGATCACCAGGGAACGGGATGTTATTTTGAGAGAAATGGAG
GAGGTTGAGGGGCAAACAGAGGAAGTCATTTTTGATCATTTGCATGCAAC
TGCATTCCAGTACACTCCTTTGGGGAGAACTATTCTCGGTCCTGCTCAGA
ATATCAAGACAATCACAAAAGAACATCTGCAGAACTATATTCACACTCAC
TATACTGCTCCCAGAATGGTGATTGCTGCTTCTGGAGCTGTGAAGCATGA
AGAAGTTGTTGAGCAAGTGAAGAAATTGTTCACAAAATTATCAGCGGATC
CAACCACCGCTTCTCAATTAGTTGCAAATGAACCAGCAATTTTCACTGGT
TCTGAGGTTAGAATAATTGATGACGATATTCCTTTGGCACAATT
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