CX291040
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX291040 vs. ExPASy Swiss-Prot
Match: ISPH_SYNP2 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=ispH PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 4.917e-47 Identity = 88/148 (59.46%), Postives = 118/148 (79.73%), Query Frame = -3 Query: 130 LKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEIKREEA 573 LK ETE++GKL E+TM+ KFG +N+HF+SFNTICDATQERQDAM+ +VE+ +DL++V+GG+NSSNT+HLQEIA +R IPSY IDS R+ N IA+K + GE+ + +WLP G++ IG+TSGASTPDK VE+V+ K+F K + A Sbjct: 253 LKSETEQMGKLFEQTMLEKFGPTEINDHFMSFNTICDATQERQDAMFDLVEKDLDLMVVIGGFNSSNTTHLQEIAVERNIPSYHIDSGDRLLGNNVIAHKPLDGEITTQTHWLPAGKLKIGVTSGASTPDKVVEDVIAKIFAEKAQPA 400
BLAST of CX291040 vs. ExPASy Swiss-Prot
Match: ISPH_NOSP7 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=ispH PE=3 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 1.868e-46 Identity = 86/149 (57.72%), Postives = 121/149 (81.21%), Query Frame = -3 Query: 127 LKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEIKREEAL 573 LK ETE+IGKL E+TM++K+ +N+HF SFNTICDATQERQDAM ++VE ++L++V+GG+NSSNT+ LQ+IA +R IPSY ID+ +RI G+ I ++ ++G+L+ ENWLP+G+I +GITSGASTPDK VE+V++K+F +K AL Sbjct: 253 LKDETEQIGKLFERTMLQKYSPIELNQHFQSFNTICDATQERQDAMLELVEHNLNLMVVIGGFNSSNTTQLQQIAFERRIPSYHIDTVERIKSGDSIEHRQLNGQLITTENWLPDGEIVVGITSGASTPDKVVEDVIEKIFAVKATAAL 401
BLAST of CX291040 vs. ExPASy Swiss-Prot
Match: ISPH_CYAP7 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain PCC 7424) GN=ispH PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 2.440e-46 Identity = 91/149 (61.07%), Postives = 117/149 (78.52%), Query Frame = -3 Query: 127 LKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEIKREEAL 573 LK ETEEIGKL E TM++K+G ++N HF+SFNTICDATQERQDAM +V+EK+DL++V+GG+NSSNT+HLQEI+ GI SY IDS RI N I +K + +L KENWLP+G+I +G+TSGASTPD VE+VL+K+F IK A+ Sbjct: 253 LKSETEEIGKLFEHTMLKKYGPLDLNNHFMSFNTICDATQERQDAMLDLVKEKLDLMVVIGGFNSSNTTHLQEISIHHGIVSYHIDSAARIDLNNHIEHKPLGKDLEVKENWLPDGKIVVGVTSGASTPDIVVEQVLQKIFAIKSAVAM 401
BLAST of CX291040 vs. ExPASy Swiss-Prot
Match: ISPH_GLOVI (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Gloeobacter violaceus GN=ispH PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 7.100e-46 Identity = 84/145 (57.93%), Postives = 118/145 (81.38%), Query Frame = -3 Query: 142 LKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGE-LVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEIK 573 LKGETE IGKL E+TMMR++G N+ +HF+S +TICDATQERQDAM+K+VEE +DL++V+GG+NSSNT+HLQEIA +RG+PS+ ID R+ I ++ +H + LV +NWLP G++T+G+T+GASTPD+ V EV+ ++FE+K Sbjct: 247 LKGETERIGKLFERTMMRRYGPANLADHFMSHDTICDATQERQDAMFKLVEEPLDLLVVIGGYNSSNTTHLQEIAVERGLPSFHIDGADRLVSAQFIEHRDLHSKSLVRTKNWLPAGEVTVGVTAGASTPDRVVAEVIARIFELK 391
BLAST of CX291040 vs. ExPASy Swiss-Prot
Match: ISPH_CYAP8 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain PCC 8801) GN=ispH PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 3.524e-45 Identity = 89/147 (60.54%), Postives = 114/147 (77.55%), Query Frame = -3 Query: 133 LKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEIKREE 573 LK ETE+IGKL E TM++K+G +N+HF+SFNTICDATQERQDAM ++V+EK+DL++V+GG+NSSNT+HLQEI +GI SY ID+ RI P N I +K + +L KENWLP G I +GITSGASTPD VE V++K+F K E Sbjct: 253 LKSETEQIGKLFEGTMLKKYGPAVINDHFMSFNTICDATQERQDAMLELVKEKLDLMVVIGGFNSSNTTHLQEIPIYQGITSYHIDNATRIKPNNCIEHKPLGKDLEIKENWLPEGSIVVGITSGASTPDIIVEAVIEKIFSAKELE 399
BLAST of CX291040 vs. ExPASy Swiss-Prot
Match: ISPH_SYNR3 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain RCC307) GN=ispH PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.339e-44 Identity = 85/152 (55.92%), Postives = 121/152 (79.61%), Query Frame = -3 Query: 118 LKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEIKREEALQLA 573 LK ETE+IG+L E+T++R++G ++N+HF++FNTICDATQERQDAM+ +V+E +DL++V+GG+NSSNT+HLQEIA RGIPS ID+ +RIGPGN + +K + +L E +LP G + IGITSGASTPD+ VE V+ ++ ++ EA Q+A Sbjct: 253 LKSETEDIGRLFERTLLRRYGPTDLNDHFLAFNTICDATQERQDAMFSLVDEPLDLMVVIGGYNSSNTTHLQEIAVSRGIPSVHIDAPERIGPGNAVEHKPLGQDLERLEPFLPEGDLRIGITSGASTPDRVVEGVIDRLLQL--AEAGQIA 402
BLAST of CX291040 vs. ExPASy Swiss-Prot
Match: ISPH_PROM4 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain MIT 9211) GN=ispH PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 1.749e-44 Identity = 85/149 (57.05%), Postives = 118/149 (79.19%), Query Frame = -3 Query: 130 LKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIG-PGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEIKREEA 573 LK ETEEIG+L EKTM+RK+G + EHF++FNTICDAT+ERQDAM+ +V+E +DL++V+GG+NSSNT+HLQEIA RGI S+ ID+ +RIG N I +K + +L+ ++N+LP G I++GITSGASTPD+ VE V+ K+ + E+A Sbjct: 253 LKSETEEIGRLFEKTMLRKYGPAELTEHFLAFNTICDATEERQDAMFSLVDEPLDLLVVIGGFNSSNTTHLQEIAISRGIRSFHIDTPERIGDQENTITHKPLGDDLITEKNFLPEGNISVGITSGASTPDRVVEHVIHKLINLSEEKA 401
BLAST of CX291040 vs. ExPASy Swiss-Prot
Match: ISPH_SYNPW (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain WH7803) GN=ispH PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 2.284e-44 Identity = 83/146 (56.85%), Postives = 116/146 (79.45%), Query Frame = -3 Query: 136 LKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEIKRE 573 LK ETEEIG+L E+TM+ KFG +NEHF++FNTICDATQERQDAM+ +V+E +DL++V+GG+NSSNT+HLQEIA +RGI S+ ID+ +RI N I +K + EL+ + +LP+G +T+GITSGASTPD+ VE V++++ + E Sbjct: 253 LKRETEEIGRLFERTMLSKFGPTQLNEHFLAFNTICDATQERQDAMFSLVDEPLDLMVVIGGYNSSNTTHLQEIAINRGIRSFHIDTPERISADNSIEHKPLGQELIRELEFLPSGTVTVGITSGASTPDRVVEHVIQRLISLSEE 398
BLAST of CX291040 vs. ExPASy Swiss-Prot
Match: ISPH_SYNS3 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain CC9311) GN=ispH PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 8.679e-44 Identity = 83/143 (58.04%), Postives = 115/143 (80.42%), Query Frame = -3 Query: 145 LKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEI 573 LK ETEEIG+L E+TM+ K+G ++NEHF++FNTICDATQERQDAM+ +V+E VDL++V+GG+NSSNT+HLQEIA RGI S+ ID+ +RI N I +K + EL +E +LP+G +T+GITSGASTPD+ VE V++++ + Sbjct: 253 LKSETEEIGRLFERTMLSKYGPTDLNEHFLAFNTICDATQERQDAMFSLVDETVDLMVVIGGYNSSNTTHLQEIAVSRGIRSFHIDTPERIHTDNSIEHKPLGEELTVEELFLPSGPVTVGITSGASTPDRVVEHVIQRLIAL 395
BLAST of CX291040 vs. ExPASy Swiss-Prot
Match: ISPH_PROMM (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain MIT 9313) GN=ispH PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 1.934e-43 Identity = 81/143 (56.64%), Postives = 115/143 (80.42%), Query Frame = -3 Query: 145 LKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEI 573 LK ETEEIG+L E+TM+RK+G +N+HF+SFNTICDAT+ERQ AM+ +V+E +DL++V+GG+NSSNT+HLQEIA RGI S+ ID+ +RIG N I +K + +L + N+LP G +++GITSGASTPD+ VE V++K+ ++ Sbjct: 253 LKSETEEIGRLFERTMLRKYGPIELNKHFLSFNTICDATEERQQAMFSLVDEPLDLLVVIGGFNSSNTTHLQEIAISRGIRSFHIDTPERIGDNNSIQHKPLGEDLFIESNFLPAGSVSVGITSGASTPDRVVEHVIQKLIDL 395 The following BLAST results are available for this feature:
BLAST of CX291040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 90
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291040 ID=CX291040; Name=CX291040; organism=Citrus clementina; type=EST; length=575bpback to top |