CX291040
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX291040 vs. ExPASy Swiss-Prot
Match: ISPH_VIBVU (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Vibrio vulnificus GN=ispH PE=3 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 2.305e-12 Identity = 39/109 (35.78%), Postives = 66/109 (60.55%), Query Frame = -3 Query: 145 ICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEI 471 IC ATQ RQDA+ ++ ++ VD+++VVG NSSN++ L+E+AE G P+Y D + I P W +G++ +G+T+GAS P++ V ++L ++ E+ Sbjct: 198 ICYATQNRQDAVRELAKD-VDVVVVVGSKNSSNSTRLKELAEKLGTPAYLTDCPQDIEP-----------------QWF-DGKVKVGVTAGASAPEELVNQILTRIKEL 287
BLAST of CX291040 vs. ExPASy Swiss-Prot
Match: ISPH_CLOAB (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Clostridium acetobutylicum GN=ispH PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.011e-12 Identity = 46/121 (38.02%), Postives = 64/121 (52.89%), Query Frame = -3 Query: 148 VENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFE 510 V+N ISFNTIC+AT ERQ + K + KVD ++V+GG SSNT+ L EI + + +++ I EN L N IG+T+GASTPD +EE + K+ E Sbjct: 179 VKNRAIEVISFNTICNATSERQK-IAKDLSNKVDFMVVIGGKQSSNTTKLYEICKSNCNETIHVENSGEI-----------------PENILKNKNCVIGVTAGASTPDWIIEEAISKMSE 281
BLAST of CX291040 vs. ExPASy Swiss-Prot
Match: ISPH_CHRSD (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=ispH PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.011e-12 Identity = 46/118 (38.98%), Postives = 67/118 (56.78%), Query Frame = -3 Query: 118 ICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEIKREEALQLA 471 IC ATQ RQDA+ + E DL+LVVG NSSN++ L+E+AE G P+Y ID+ ++I P WL + IGIT+GAS P+ V+ V++++ + E +LA Sbjct: 197 ICYATQNRQDAVRGLASES-DLVLVVGSPNSSNSNRLRELAERTGTPAYLIDTAEQIRP-----------------EWLTDVS-AIGITAGASAPEVLVQAVIERLQSLGAEAPDELA 295
BLAST of CX291040 vs. ExPASy Swiss-Prot
Match: ISPH_NITEU (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Nitrosomonas europaea GN=ispH PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.136e-12 Identity = 42/116 (36.21%), Postives = 71/116 (61.21%), Query Frame = -3 Query: 124 ICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEIKREEALQ 471 IC ATQ RQDA+ K+V+ DL++VVG NSSN++ L E+A + + +Y +D +++ +E+WL N + IGIT+GAS P+ V++VL+++ +I +++ Q Sbjct: 197 ICYATQNRQDAVKKLVK-LCDLVVVVGSPNSSNSNRLCEVARNENVEAYMVDQAEQL-----------------QESWLTNKR-CIGITAGASAPEILVQQVLERLEQIAAKQSNQ 293
BLAST of CX291040 vs. ExPASy Swiss-Prot
Match: ISPH_ALISL (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Aliivibrio salmonicida (strain LFI1238) GN=ispH PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.136e-12 Identity = 41/106 (38.68%), Postives = 63/106 (59.43%), Query Frame = -3 Query: 154 ICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKV 471 IC ATQ RQDA+ M + VD+++VVG NSSN++ L+E++E G SY ID + + KE WL N Q +G+T+GAS P++ V +++++V Sbjct: 196 ICYATQNRQDAVRDMAGQ-VDVMIVVGSKNSSNSNRLRELSEKLGTTSYLIDCPEEL-----------------KEEWLTN-QAKVGVTAGASAPEELVNQIIEQV 282
BLAST of CX291040 vs. ExPASy Swiss-Prot
Match: ISPH2_BURMA (4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 OS=Burkholderia mallei GN=ispH2 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.136e-12 Identity = 40/109 (36.70%), Postives = 65/109 (59.63%), Query Frame = -3 Query: 145 ICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEI 471 IC ATQ RQDA+ K + + D+++VVG NSSN+S L+E+AE RG+ +Y +D+ ++I P W+ G+ IG+T+GAS P+ + V+ ++ E+ Sbjct: 208 ICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSNSSRLREVAEKRGVAAYMVDAPEQIDPA-----------------WVA-GKRRIGVTAGASAPEVLAQAVIARLREL 297
BLAST of CX291040 vs. ExPASy Swiss-Prot
Match: ISPH1_BURPS (4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1 OS=Burkholderia pseudomallei GN=ispH1 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.136e-12 Identity = 40/109 (36.70%), Postives = 65/109 (59.63%), Query Frame = -3 Query: 145 ICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEI 471 IC ATQ RQDA+ K + + D+++VVG NSSN+S L+E+AE RG+ +Y +D+ ++I P W+ G+ IG+T+GAS P+ + V+ ++ E+ Sbjct: 208 ICYATQNRQDAV-KFMAPQCDVVIVVGSPNSSNSSRLREVAEKRGVAAYMVDAPEQIDPA-----------------WVA-GKRRIGVTAGASAPEVLAQAVIARLREL 297
BLAST of CX291040 vs. ExPASy Swiss-Prot
Match: ISPH_AZOSB (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Azoarcus sp. (strain BH72) GN=ispH PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.707e-12 Identity = 41/106 (38.68%), Postives = 62/106 (58.49%), Query Frame = -3 Query: 154 ICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKV 471 IC ATQ RQDA+ K + D++ VVG NSSN++ L+E+AE RG+P+Y +D+ I P W+ G+ IG+T+GAS P+ V EV++++ Sbjct: 196 ICYATQNRQDAV-KFMTPHADVVFVVGSKNSSNSNRLREVAELRGVPAYLVDNAAGIDPA-----------------WIV-GKRRIGVTAGASAPEVLVAEVIERL 282
BLAST of CX291040 vs. ExPASy Swiss-Prot
Match: ISPH_THISH (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=ispH PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.494e-11 Identity = 41/104 (39.42%), Postives = 62/104 (59.62%), Query Frame = -3 Query: 160 ICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLK 471 IC ATQ RQDA+ ++ E DL LVVG NSSN++ L+EIAE G+ +Y +D+ +I ++ WL G+ +G+T+GAS P+ V+EV++ Sbjct: 197 ICYATQNRQDAVKQLASE-CDLFLVVGSPNSSNSNRLREIAEKLGVEAYLVDNAGQI-----------------EDRWL-EGKTRVGVTAGASAPELLVQEVVE 281
BLAST of CX291040 vs. ExPASy Swiss-Prot
Match: ISPH_PROMH (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Proteus mirabilis (strain HI4320) GN=ispH PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.494e-11 Identity = 43/118 (36.44%), Postives = 66/118 (55.93%), Query Frame = -3 Query: 118 ICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEIKREEALQLA 471 IC AT RQ+A ++ E + D++ VVG NSSN++ L E+A+ G PSY IDS + I E W+ + I +G+T+GAS PD V++VL ++ EE ++L+ Sbjct: 197 ICYATTNRQEAARELAE-RADVVFVVGSKNSSNSNRLAELAQRAGKPSYLIDSAEDI-----------------DEIWVSHANI-VGVTAGASAPDILVQQVLARLKAFGAEEVIELS 295 The following BLAST results are available for this feature:
BLAST of CX291040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 90
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291040 ID=CX291040; Name=CX291040; organism=Citrus clementina; type=EST; length=575bpback to top |