CX291040
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX291040 vs. ExPASy Swiss-Prot
Match: ISPH_VIBFM (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Vibrio fischeri (strain MJ11) GN=ispH PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.952e-11 Identity = 40/106 (37.74%), Postives = 63/106 (59.43%), Query Frame = -3 Query: 154 ICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKV 471 IC ATQ RQDA+ M + VD+++VVG NSSN++ L+E++E G SY ID + + KE WL + Q +G+T+GAS P++ V +++++V Sbjct: 196 ICYATQNRQDAVRDMASQ-VDVMIVVGSKNSSNSNRLRELSEKLGTTSYLIDCPEDL-----------------KEEWLTD-QAKVGVTAGASAPEELVNQIIEQV 282
BLAST of CX291040 vs. ExPASy Swiss-Prot
Match: ISPH_TREDE (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Treponema denticola GN=ispH PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.952e-11 Identity = 44/111 (39.64%), Postives = 61/111 (54.95%), Query Frame = -3 Query: 148 FNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFE 480 FNTIC AT +RQ A+ K+ E VD +LV+GG NS+NT L + A D P++ I+ I P +Y + IG+T+GASTPD ++EV KK+ E Sbjct: 198 FNTICPATSDRQAALKKLAYE-VDALLVIGGKNSANTKRLFQTAVDTKKPAWLIEDASEI-PKEIFSYSV------------------IGLTAGASTPDFIIDEVEKKLLE 288
BLAST of CX291040 vs. ExPASy Swiss-Prot
Match: ISPH_RALSO (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Ralstonia solanacearum GN=ispH PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.952e-11 Identity = 36/106 (33.96%), Postives = 65/106 (61.32%), Query Frame = -3 Query: 154 ICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKV 471 IC ATQ RQDA+ K + +V++++VVG NSSN++ L+E+AE G+P+Y +D+ +++ P WL G+ +G+T+GAS P++ + ++ ++ Sbjct: 209 ICYATQNRQDAV-KFMAPQVEVVIVVGSPNSSNSNRLRELAEKLGVPAYMVDTPEQVRP-----------------EWLA-GKRRVGLTAGASAPEELAQSIVDRL 295
BLAST of CX291040 vs. ExPASy Swiss-Prot
Match: ISPH_NITSB (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Nitratiruptor sp. (strain SB155-2) GN=ispH PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.952e-11 Identity = 49/139 (35.25%), Postives = 74/139 (53.24%), Query Frame = -3 Query: 142 EEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEIK 558 EE K+V M K V FNTIC+AT E QDA ++ E D+++++GG NSSNT L +I ++ SY +++ K + EKE W G+ GIT+GASTP+ +EEV++ + +I+ Sbjct: 162 EEYQKIVNYLMEHKKEVR-------VFNTICNATFENQDAARELSRE-ADIMIIIGGKNSSNTKQLFKICKENCPDSYLVENAKEL----------------EKE-WF-EGKKVCGITAGASTPNWIIEEVIENIKKIQ 274
BLAST of CX291040 vs. ExPASy Swiss-Prot
Match: ISPH_AZOSE (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Azoarcus sp. (strain EbN1) GN=ispH PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.952e-11 Identity = 40/109 (36.70%), Postives = 66/109 (60.55%), Query Frame = -3 Query: 145 ICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEI 471 IC ATQ RQDA+ K + +VD++ VVG NSSN++ L+E+AE G+P+Y +D+ + I P WL + + +G+T+GAS P+ V+ V++++ E+ Sbjct: 196 ICYATQNRQDAV-KFMAPRVDVVFVVGSRNSSNSNRLREVAELLGVPAYLVDNAEGIEP-----------------IWLEDKK-RVGVTAGASAPEVLVDAVVERLKEL 285
BLAST of CX291040 vs. ExPASy Swiss-Prot
Match: ISPH1_RHOPA (4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1 OS=Rhodopseudomonas palustris GN=ispH1 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.952e-11 Identity = 44/109 (40.37%), Postives = 62/109 (56.88%), Query Frame = -3 Query: 145 ICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEI 471 IC ATQ RQ A+ +M + VDLILVVG NSSN++ L+EI + GIPSY I + P WL +G+ +GIT+GAS P+ V++V++ + I Sbjct: 191 ICYATQNRQSAVRQM-SKLVDLILVVGANNSSNSNRLREIGTEAGIPSYLIADGSELDPA-----------------WL-DGKKAVGITAGASAPEVLVDDVIEALRRI 280
BLAST of CX291040 vs. ExPASy Swiss-Prot
Match: ISPH_VIBPA (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Vibrio parahaemolyticus GN=ispH PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 2.549e-11 Identity = 39/109 (35.78%), Postives = 63/109 (57.80%), Query Frame = -3 Query: 145 ICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEI 471 IC ATQ RQDA+ ++ + VD+++VVG NSSN++ L+E+AE G P Y D + I P W G+ +G+T+GAS P++ V ++L+++ E+ Sbjct: 198 ICYATQNRQDAVRELAGD-VDVMVVVGSKNSSNSTRLKELAEKLGTPGYLTDCPEDIKP-----------------EWF-EGKTKVGVTAGASAPEELVNQILERIKEL 287
BLAST of CX291040 vs. ExPASy Swiss-Prot
Match: ISPH_VIBF1 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=ispH PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.549e-11 Identity = 40/106 (37.74%), Postives = 62/106 (58.49%), Query Frame = -3 Query: 154 ICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKV 471 IC ATQ RQDA+ M + VD+++VVG NSSN++ L+E++E G SY ID + + KE WL Q +G+T+GAS P++ V +++++V Sbjct: 196 ICYATQNRQDAVRDMASQ-VDVMIVVGSKNSSNSNRLRELSEKLGTTSYLIDCPEDL-----------------KEEWLTE-QTKVGVTAGASAPEELVNQIIEQV 282
BLAST of CX291040 vs. ExPASy Swiss-Prot
Match: ISPH_HAHCH (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Hahella chejuensis (strain KCTC 2396) GN=ispH PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.549e-11 Identity = 42/118 (35.59%), Postives = 66/118 (55.93%), Query Frame = -3 Query: 118 ICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEIKREEALQLA 471 IC ATQ RQDA+ K + D++LVVG NSSN++ L+E+AE P+Y ID I P +W G ++G+T+GAS P+ V++V++++ E+ E ++A Sbjct: 197 ICYATQNRQDAV-KELAATCDVVLVVGSVNSSNSNRLRELAERMQTPAYLIDGAHEIQP-----------------DWFA-GAASVGVTAGASAPEVLVQQVVQRLRELGGEAPAEIA 295
BLAST of CX291040 vs. ExPASy Swiss-Prot
Match: ISPH_SODGM (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Sodalis glossinidius (strain morsitans) GN=ispH PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.329e-11 Identity = 44/117 (37.61%), Postives = 67/117 (57.26%), Query Frame = -3 Query: 121 ICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEIKREEALQL 471 IC AT RQ+A+ + + D++LVVG NSSN++ L E+A+ G P+Y IDS I +E+WL G TIG+T+GAS PD V++V++++ + E A +L Sbjct: 196 ICYATTNRQEAVRSLAAD-ADVVLVVGSKNSSNSNRLSELAQRVGKPAYLIDSAGDI-----------------QESWL-QGTQTIGVTAGASAPDILVQQVIERLRLLGAEGAKEL 293 The following BLAST results are available for this feature:
BLAST of CX291040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 90
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291040 ID=CX291040; Name=CX291040; organism=Citrus clementina; type=EST; length=575bpback to top |