CX291041

Overview
NameCX291041
Unique NameCX291041
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length609
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig345 contig Ccv1_Contig345:562..1170. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC23_ORYSJ (Laccase-23 OS=Oryza sativa subsp. japonica GN=LAC23 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 3.511e-41
Identity = 94/201 (46.77%), Postives = 116/201 (57.71%), Query Frame = 3
Query:   15 PIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSXXXXXXXXXXXXXTLVAFNMNTTRGIVVY---DGASTANPIMPALPAYNDTPTAYTFYSNITGLSGGPQWVPCPRRVDERM 608
            PI+LGEWW+ + +DV      TG  P ISDA T+N +PGDLY CS + T    V  G+T LLR INAALN +LF  +A H  TVVA DA YT PY T ++++APGQTTDVL+  DQP G                V F+  TT  I  Y   + AS+A   MP LPAYNDT  A  F +N+ GL    +    P RVDE +
Sbjct:  161 PILLGEWWDMNPVDVVRAATRTGAAPNISDALTVNAQPGDLYSCSSHDTAFFPVTSGETNLLRFINAALNTELFVSLAGHNMTVVAADASYTKPYTTSLLLLAPGQTTDVLVTFDQPPGRYYLAARAYASAQG--VPFDNTTTTAIFDYGAANNASSAAIAMPTLPAYNDTTAATAFTTNLRGL----RKAELPSRVDESL 355          
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC1_ARATH (Laccase-1 OS=Arabidopsis thaliana GN=LAC1 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 3.511e-41
Identity = 93/214 (43.46%), Postives = 121/214 (56.54%), Query Frame = 3
Query:    9 EVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSXXXXXXXXXXXXXTLVAFNMNTTRGIVVYDGAS--------------TANPIMPALPAYNDTPTAYTFYSNITGLSGGPQWVPCPRRVDERM 608
            E+PI+LGEWWNDD+ +V      TG G ++SDA+T+NG PG LYPCS   T+   V+ GKTY+LRIINAALNN+LF  +ANH  TVV VDA YT P  T  ++IAPGQTT +LL+ADQ  G              ++  FN +TT G + Y G +              TA   + ALP   DT  A  F  +I  L         P ++D+R+
Sbjct:  161 EIPIILGEWWNDDVDNVEKAMMKTGAGAKVSDAYTLNGLPGPLYPCSTKDTFTATVDAGKTYILRIINAALNNELFVAVANHTLTVVEVDAVYTKPVHTKAIMIAPGQTTTLLLRADQLSGG--EFLIAATPYVTSVFPFNNSTTVGFIRYTGKTKPENSVNTRRRRRLTAMSTVVALPNMLDTKFATKFSDSIKSLGSAKYPCKVPTKIDKRV 372          
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC12_ORYSJ (Laccase-12/13 OS=Oryza sativa subsp. japonica GN=LAC12 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 3.511e-41
Identity = 93/207 (44.93%), Postives = 120/207 (57.97%), Query Frame = 3
Query:    6 KEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSXXXXXXXXXXXXXTLVAFNMNTTRGIVVYD------GASTANPIM-PALPAYNDTPTAYTFYSNITGLSGGPQWVPCPRRVDER 605
            +EVPI+ GEWWN+D   V ++   TG GP ISDA+T+NG PG LY CS   T+KLKV+ GKTY+LR+INAALN++LFF IANH  TVV VDA Y  P+  D ++IAPGQT++VLL A +P                T   F+  T  G++ YD       A    PI  P LP  NDT     F + +  L+        P++VD R
Sbjct:  161 EEVPIMFGEWWNNDTEAVISQALQTGGGPNISDAYTLNGLPGPLYNCSAQDTFKLKVKPGKTYMLRLINAALNDELFFSIANHTLTVVDVDALYVKPFTVDTLIIAPGQTSNVLLTA-KPTYPGASYYMLARPYTTTQGTFDNTTVAGVLEYDDPCPTTAAGKIVPIFSPTLPQINDTNAVSNFTAKLRSLASAGYPAAVPQQVDHR 366          
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC4_ORYSJ (Laccase-4 OS=Oryza sativa subsp. japonica GN=LAC4 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.334e-40
Identity = 90/210 (42.86%), Postives = 113/210 (53.81%), Query Frame = 3
Query:    6 KEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSXXXXXXXXXXXXXTLVAFNMNTTRGIVVYDGASTANP----------IMPALPAYNDTPTAYTFYSNITGLSGGPQWVPCPRRVDER 605
            KEVP++ GEWWN D  +V N+   TG GP +SDAFTING PG LY CS   T+KLKV+ GKTY+LR+INAALN +LFF +ANH  TVV VDA Y  P+  D +VI+PGQTT+VLL A                       F   T  GI+ Y+  + +              P LP  NDT     F   +  L+        P+ VD+R
Sbjct:  162 KEVPVIFGEWWNADTEEVVNQAVQTGGGPNVSDAFTINGLPGPLYNCSAQDTFKLKVKPGKTYMLRLINAALNEELFFAVANHTLTVVEVDAVYVKPFTVDTLVISPGQTTNVLLTAKPYYPGANFYMSAAPYSTARPGTFGNTTVAGILEYENPAMSPSAASFVKGLPLFKPTLPQLNDTDFVTNFTDKLRSLATPEYPAAVPQSVDKR 371          
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC25_ORYSJ (Laccase-25 OS=Oryza sativa subsp. japonica GN=LAC25 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 2.973e-40
Identity = 90/201 (44.78%), Postives = 114/201 (56.72%), Query Frame = 3
Query:    3 DKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSE-NQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSXXXXXXXXXXXXXTLVAFNMNTTRGIVVYDGASTAN-----PIMPALPAYNDTPTAYTFYSNITGL--SGGPQWVP 581
            DKE  ++LGEWWN  + D+     +TG+    +DA+TING+PGD Y CS  NQT K +V +  TYLLRIINA +N  LFFK+A H+ TVV  DA YT PY TDVVV++PGQT D L+ A   VG                  F+  T   I+ Y GA         P++P  P  NDT TA+ F+S +T L   G P  VP
Sbjct:  157 DKEHVVILGEWWNATVYDMERMAFLTGIPAPHADAYTINGKPGDFYNCSAPNQTAKFEVRQNGTYLLRIINAGMNTPLFFKVAKHRLTVVGADACYTKPYKTDVVVVSPGQTVDALMVASAAVGRYYMAASPYDSAIPQGPPFSDTTATAILQYAGARRKTVRWRPPVLPRRPPVNDTATAHRFFSGMTALLRHGKPSAVP 357          
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC6_ORYSJ (Laccase-6 OS=Oryza sativa subsp. japonica GN=LAC6 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 3.882e-40
Identity = 95/210 (45.24%), Postives = 121/210 (57.62%), Query Frame = 3
Query:    6 KEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSE--NQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVG---SXXXXXXXXXXXXXTLVAFNMNTTRGIVVYDGAS----TANPIMPALPAYNDTPTAYTFYSNITGLSGGPQWVPCPRRVDERM 608
            +E  ++LGEWWN D + + ++   TG+    +DA+TING PGD Y C E  N+  K +V + KTYLLRIINAALN   FFK+A H FTVVA DA YT+PY TDV+VIAPGQT D L+ AD   G                     FN NT+  IV Y  A+      +P++P +P  NDT TA  FY+++T L   P     P  VD RM
Sbjct:  158 EEKTVLLGEWWNGDPVALESQSFSTGIPAPNADAYTINGMPGDSYLCPETTNRIAKFEVRRDKTYLLRIINAALNTAFFFKVAGHTFTVVAADASYTEPYATDVIVIAPGQTVDALMAADASPGCYHMAISSYQSAIPFPPRPAGFNGNTSTAIVEYVDATATTDAGSPVLPVMPKPNDTYTANQFYTSLTALI-RPGRRTVPLTVDTRM 366          
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC3_ARATH (Laccase-3 OS=Arabidopsis thaliana GN=LAC3 PE=2 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 3.882e-40
Identity = 86/211 (40.76%), Postives = 121/211 (57.35%), Query Frame = 3
Query:    6 KEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSXXXXXXXXXXXXXTLVAFNMNTTRGIVVYDGASTAN--------PIMPALPAYNDTPTAYTFYSNITGLSGGPQW--VPCPRRVDERM 608
            +++PI+LGEWW+ + MDV  + + TG    +SDA+TING+PGDLY CS   T +  +  G+T  LR+INA +N +LFF +ANH+FTVV  D+ YT P+ T+V++I PGQTT+VLL A+Q  G                  F+  TT  I+ Y  A T          P+ P LP +NDT TA  F + +        W   P P++VDE +
Sbjct:  159 RDIPILLGEWWDRNPMDVLKQAQFTGAAANVSDAYTINGQPGDLYRCSRAGTIRFPIFPGETVQLRVINAGMNQELFFSVANHQFTVVETDSAYTKPFTTNVIMIGPGQTTNVLLTANQRPGRYYMAARAYNSAN---APFDNTTTTAILQYVNAPTRRGRGRGQIAPVFPVLPGFNDTATATAFTNRLR------YWKRAPVPQQVDENL 360          
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC15_ARATH (Laccase-15 OS=Arabidopsis thaliana GN=TT10 PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 6.622e-40
Identity = 89/203 (43.84%), Postives = 115/203 (56.65%), Query Frame = 3
Query:    3 DKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSXXXXXXXXXXXXXTLVAFNMNTTRGIVVYDGA-----STANPIMPALPAYNDTPTAYTFYSNITGLSGGPQWVPCPRRV 596
            D EVPI+LGEWW  D+ +V      TG  P +SDA TING PG LYPCS++ T+ L VEKGKTY +R++NAA+N  LFF IANH  TVV+ D  Y  P     + I+PG+T D+LL ADQ                   + FN +TT GI+ Y  +     S+ +   P LP YNDT  A+ F++ I  L  G   V   RR+
Sbjct:  152 DHEVPIILGEWWKRDVREVVEEFVRTGGAPNVSDALTINGHPGFLYPCSKSDTFHLTVEKGKTYRIRMVNAAMNLPLFFAIANHSLTVVSADGHYIKPIKATYITISPGETLDMLLHADQDPERTYYMAARAYQSGN--IDFNNSTTIGILSYTSSCKAKTSSFSGYYPTLPFYNDTSAAFGFFTKIKCLFSGQVPVQISRRI 352          
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC11_ARATH (Laccase-11 OS=Arabidopsis thaliana GN=LAC11 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.475e-39
Identity = 87/202 (43.07%), Postives = 117/202 (57.92%), Query Frame = 3
Query:    6 KEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSXXXXXXXXXXXXXTLVAFNMNTTRGIVVYDGA-STANPIMPALPAYNDTPTAYTFYSNITGLSGGPQWVPCPRRVDERM 608
            +E  I+LGEWWN D+    N+    G  P +SDA TING+PG L+PCSE  T+ ++ E GKTYLLRIINAALN++LFF IA H  TVV +DA YT P+ T  +++ PGQTT+VL+K D+   S               V+ +  T   I+ Y G  +T  PI+P LP  NDT  A  +   +  L+        P +VD R+
Sbjct:  157 QESNIILGEWWNKDVETAVNQANQLGAPPPMSDAHTINGKPGPLFPCSEKHTFVIEAEAGKTYLLRIINAALNDELFFGIAGHNMTVVEIDAVYTKPFTTKAILLGPGQTTNVLVKTDR---SPNRYFMAASPFMDAPVSVDNKTVTAILQYKGVPNTVLPILPKLPLPNDTSFALDYNGKLKSLNTPNFPALVPLKVDRRL 355          
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC7_ORYSJ (Laccase-7 OS=Oryza sativa subsp. japonica GN=LAC7 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.287e-39
Identity = 91/206 (44.17%), Postives = 120/206 (58.25%), Query Frame = 3
Query:    3 DKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSXXXXXXXXXXXXXTLVAFNMNTT-RGIVVYDGAST---ANPIMPALPAYNDTPTAYTFYSNITGLSGGPQWVPCPRRVDERM 608
            D+EVPIVLGEWW+ +++D+ +    +G  PR SDAFT+NG  G+LY C+ N T+ + V+   T LLR+INA LN  LFFK+A H FTVVAVDA YT  Y TD +V+APG T D L+  +   GS             T +A   +TT   IV Y+  ST   A P+MP +P  +D+ TA  FY  + G    P     P +VD  M
Sbjct:  161 DQEVPIVLGEWWSRNVVDIESDAVSSGQLPRESDAFTVNGVTGELYQCA-NDTFTVDVQPNTTVLLRVINAGLNTHLFFKVAGHAFTVVAVDACYTANYTTDTLVLAPGHTVDALMVTNASAGSYYMAVQAYDSLSPTTMAVTDDTTATAIVHYNTTSTKKNATPVMPTMPQSSDSATANAFYFGLRG-PPSPSAPAVPTKVDVNM 364          
The following BLAST results are available for this feature:
BLAST of CX291041 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
LAC23_ORYSJ3.511e-4146.77Laccase-23 OS=Oryza sativa subsp. japonica GN=LAC2... [more]
LAC1_ARATH3.511e-4143.46Laccase-1 OS=Arabidopsis thaliana GN=LAC1 PE=2 SV=... [more]
LAC12_ORYSJ3.511e-4144.93Laccase-12/13 OS=Oryza sativa subsp. japonica GN=L... [more]
LAC4_ORYSJ1.334e-4042.86Laccase-4 OS=Oryza sativa subsp. japonica GN=LAC4 ... [more]
LAC25_ORYSJ2.973e-4044.78Laccase-25 OS=Oryza sativa subsp. japonica GN=LAC2... [more]
LAC6_ORYSJ3.882e-4045.24Laccase-6 OS=Oryza sativa subsp. japonica GN=LAC6 ... [more]
LAC3_ARATH3.882e-4040.76Laccase-3 OS=Arabidopsis thaliana GN=LAC3 PE=2 SV=... [more]
LAC15_ARATH6.622e-4043.84Laccase-15 OS=Arabidopsis thaliana GN=TT10 PE=1 SV... [more]
LAC11_ARATH1.475e-3943.07Laccase-11 OS=Arabidopsis thaliana GN=LAC11 PE=2 S... [more]
LAC7_ORYSJ3.287e-3944.17Laccase-7 OS=Oryza sativa subsp. japonica GN=LAC7 ... [more]

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Properties
Property NameValue
Genbank descriptionC03003C08SK OF2 Citrus clementina cDNA clone C03003C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291041 ID=CX291041; Name=CX291041; organism=Citrus clementina; type=EST; length=609bp
CCGATAAAGAAGTTCCCATTGTTCTCGGAGAGTGGTGGAATGACGATATC
ATGGATGTTGCCAACCGAGGGGAAATTACCGGTGTAGGTCCTAGAATTTC
CGATGCTTTCACCATCAATGGAAGGCCTGGAGACCTCTATCCCTGCTCGG
AAAATCAAACATACAAGCTTAAGGTTGAGAAAGGGAAGACCTATCTCCTA
CGTATTATCAACGCTGCACTCAATAACCAGCTCTTCTTCAAGATAGCCAA
TCACAAATTTACAGTCGTCGCCGTTGACGCTGGGTACACTGATCCCTACG
TCACCGATGTGGTGGTGATAGCTCCCGGCCAAACCACTGACGTTCTGCTA
AAAGCCGACCAGCCAGTGGGTTCTTATTACATGGCTGCAAGAGCATACGC
TGCCCCGCCGCCGACGCTAGTAGCGTTCAATATGAACACCACGAGAGGCA
TCGTTGTCTACGATGGTGCCAGCACGGCCAATCCTATAATGCCAGCCTTA
CCAGCTTACAATGATACGCCTACAGCCTACACATTTTACAGTAATATAAC
TGGATTAAGTGGTGGACCTCAATGGGTCCCATGCCCACGTCGAGTGGATG
AACGTATGT
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