CX291041

Overview
NameCX291041
Unique NameCX291041
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length609
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig345 contig Ccv1_Contig345:562..1170. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC5_ARATH (Laccase-5 OS=Arabidopsis thaliana GN=LAC5 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.249e-38
Identity = 88/215 (40.93%), Postives = 114/215 (53.02%), Query Frame = 3
Query:    6 KEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSXXXXXXXXXXXXXTLVAFNMNTTRGIVVYDGA--------------STANPIMPALPAYNDTPTAYTFYSNITGLSGGPQWVPCPRRVDERM 608
            + VP++LGEWW+ + +DV      TG  P  SDA+TING+PGDLY CS   T  + +  G+T LLR+IN+ALN  LFF +ANHK TVV  DA Y  P+ T+V+V+ PGQTTDVL+  DQP                    F   TT  I+ Y  A              ++  PIMP LPAYNDT T   F  +   L    +    P  +DE +
Sbjct:  160 RNVPLLLGEWWDANPVDVLRESIRTGGAPNNSDAYTINGQPGDLYKCSSQDTTVVPINVGETILLRVINSALNQPLFFTVANHKLTVVGADASYLKPFTTNVIVLGPGQTTDVLITGDQPPNRYYMAARAYQSAQN--APFGNTTTTAILQYKSAPCCGVGGGSGTKKGNSFKPIMPILPAYNDTNTVTRFSQSFRSL----RRAEVPTEIDENL 368          
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC10_ORYSJ (Laccase-10 OS=Oryza sativa subsp. japonica GN=LAC10 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.130e-38
Identity = 90/204 (44.12%), Postives = 121/204 (59.31%), Query Frame = 3
Query:    6 KEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSXXXXXXXXXXXXXT--LVAFNMNTTRGIVVY--DGASTANPIM-PALPAYNDTPTAYTFYSNITGLSGGPQWVPCPRRVDE 602
            K+VPI+ GEW+N D   +  +   TG GP +SDA+TING PG LY CS   T++LKV+ GK YLLR+INAALN++LFF +ANH  TVV VDA Y  P+ TDVV+I PGQTT+VLL+A     +             T     ++  T   ++ Y   G   + P++ P+LPA NDT  A  F + +  L+        PRRVD+
Sbjct:  163 KDVPIIFGEWFNADPEAIVAQALQTGGGPNVSDAYTINGLPGPLYNCSSKDTFRLKVQPGKMYLLRLINAALNDELFFSVANHTLTVVDVDASYVKPFDTDVVLITPGQTTNVLLRAKPTAEAAGATHLMMARPYATGRPGTYDNTTVAAVLEYAPPGHIKSLPLLRPSLPALNDTAFAAGFAAKLRSLACPDYPSNVPRRVDK 366          
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC1_ORYSJ (Putative laccase-1 OS=Oryza sativa subsp. japonica GN=LAC1 PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 4.746e-38
Identity = 87/211 (41.23%), Postives = 117/211 (55.45%), Query Frame = 3
Query:    3 DKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYP-CSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGS---XXXXXXXXXXXXXTLVAFNMNTTRGIVVYDGASTANPIMP-----ALPAYNDTPTAYTFYSNITGLSGGPQWVPCPRRVDERM 608
            DKE+P     WWNDD+  V ++ +  G     SD  TING+PGD++P CS + T+K+ V++G TYLLR+INA L N +FF IA H+ TVV +DA YT P   D ++IAPGQT DVLLKA++ +GS                  + FN +T   IV Y  ++ A P+ P      LPA  D   A  F   +  L      V  P++VDE M
Sbjct:  162 DKEIP-----WWNDDVEHVLDKAKRIGGDVEPSDTNTINGQPGDMFPLCSRDDTFKVAVQQGNTYLLRVINAGLTNDMFFAIAGHRLTVVGIDARYTKPITVDYIMIAPGQTMDVLLKANRTLGSNSRYYMAARTFITLPVDTIRFNNSTATAIVEYTDSAVARPVGPPEFPVLLPAIKDEDAAMAFVKQLRSLGNQDHPVHVPKQVDEHM 367          
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC21_ORYSJ (Laccase-21 OS=Oryza sativa subsp. japonica GN=LAC21 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 6.198e-38
Identity = 83/209 (39.71%), Postives = 117/209 (55.98%), Query Frame = 3
Query:    3 DKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSXXXXXXXXXXXXXTL----VAFNMNTTRGIV-VYDGASTANP--IMPALPAYNDTPTAYTFYSNITGLSGGPQWVPCPRRVDERM 608
            DKE+PI+LGEWW +D+  +    +  G   + SDA TING+PGD++PCS + T+K+ VE G TYLL++INA L N +FF ++ H+ TVV +DA YT P   + ++IAPGQT D+LL+A++ +GS                   + FN +T   +V  Y G S A P      LP+ +D   A  F   +  L      V  P  VDE M
Sbjct:  164 DKEIPIILGEWWKNDVNHLLEEMKRIGEDVKPSDANTINGQPGDMFPCSRDDTFKVAVEHGNTYLLQVINAGLTNDMFFAVSGHRLTVVGIDARYTKPLTVEYIMIAPGQTMDLLLEANRSLGSKSNSRYYMAARTFITLPVPIPFNNSTATAVVEYYTGDSGAGPPDFPAVLPSLDDVDAAMAFLRQLRSLGSKDHPVHVPTHVDEHM 372          
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC17_ARATH (Laccase-17 OS=Arabidopsis thaliana GN=LAC17 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.057e-37
Identity = 92/214 (42.99%), Postives = 121/214 (56.54%), Query Frame = 3
Query:    6 KEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLL--KADQPVGSXXXXXXXXXXXXXTLVAFNMNTTRGIVVYD------GASTANPI------MPALPAYNDTPTAYTFYSNITGLSGGPQWVPCPRRVDER 605
            KEVP++ GEW+N D   +  +   TG GP +SDA+TING PG LY CS   T++L+V+ GKTYLLR+INAALN++LFF IANH  TVV  DA Y  P+ T+ ++IAPGQTT+VLL  K+  P  S             T   F+ +T  GI+ Y+      GA +   I       P LPA NDT  A  F + +  L+        P  VD +
Sbjct:  156 KEVPMIFGEWFNADTEAIIRQATQTGGGPNVSDAYTINGLPGPLYNCSAKDTFRLRVKPGKTYLLRLINAALNDELFFSIANHTVTVVEADAIYVKPFETETILIAPGQTTNVLLKTKSSYPSASFFMTARPYVTGQGT---FDNSTVAGILEYEPPKQTKGAHSRTSIKNLQLFKPILPALNDTNFATKFSNKLRSLNSKNFPANVPLNVDRK 366          
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC11_ORYSJ (Putative laccase-11 OS=Oryza sativa subsp. japonica GN=LAC11 PE=5 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 1.381e-37
Identity = 87/204 (42.65%), Postives = 114/204 (55.88%), Query Frame = 3
Query:    6 KEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSE-NQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSXXXXXXXXXXXXXTLVAFNMNTTRGIVVYDGASTANPI-----MPALPAYNDTPTAYTFYSNITGLSGGPQWVPCPRRVD 599
            +EVP++LGEW+N D   V  +   TG GP +SDA+T NG PG  Y CS  N T+KL+V  GKTYLLR+INAALN++LFF +ANH   VV  DA Y  P+    +VI+PGQT DVLL A                   T+  F+  T   ++ Y GA+T+        +P+LPAYNDT     F ++   L+        PR VD
Sbjct:  124 REVPLLLGEWFNADPEAVIKQALQTGGGPNVSDAYTFNGLPGPTYNCSSSNDTFKLRVRPGKTYLLRLINAALNDELFFGVANHTLMVVQADASYVKPFAATALVISPGQTMDVLLTAAANNPPSRSFAIAVAPYTNTVGTFDNTTAVAVLEYYGAATSAAALRSLPLPSLPAYNDTGAVANFSASFRSLASAQYPARVPRTVD 327          
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC2_ORYSJ (Laccase-2 OS=Oryza sativa subsp. japonica GN=LAC2 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.355e-37
Identity = 87/207 (42.03%), Postives = 116/207 (56.04%), Query Frame = 3
Query:    3 DKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYP-CSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSXXXXXXXXXXXXXTLVAFNMNTTRGIVVYDGASTANPIMPAL----PAYNDTPTAYTFYSNITGLSGGPQWVPCPRRVDERM 608
            D E  IVLGEWW+ D+  V  +G + G+ P +SDA TING+PG L P CSE  TY L+V+ GKTYLLRIINAA+N++LFF IA H  TVV +DA YT P+    V ++PGQT +VL+ ADQ  G                +  +  T   I+ Y G  T+  ++PAL    PA N T +   F+  +  L+        P  VD  +
Sbjct:  159 DDEAEIVLGEWWHADVETVERQGSMLGMAPNMSDAHTINGKPGPLVPFCSEKHTYALQVQSGKTYLLRIINAAVNDELFFSIAGHNMTVVEIDATYTKPFAASTVQLSPGQTMNVLVSADQSPGRYFMVAKPFNDVP---IPADNKTATAILQYAGVPTS--VVPALPQTMPATNSTGSVAAFHDKLRSLNSPRYPADVPLAVDRHL 360          
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC2_ARATH (Laccase-2 OS=Arabidopsis thaliana GN=LAC2 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 7.577e-36
Identity = 86/204 (42.16%), Postives = 111/204 (54.41%), Query Frame = 3
Query:    6 KEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSXXXXXXXXXXXXXTLVAFNMNTTRGIVVYD----GASTANPIMPALPAYNDTPTAYTFYSNITGLSGGPQWVPCPRRVDER 605
            K+VPI+ GEW+N D   V  +   TG GP  SDA T NG PG LY CS   TYKL V+ GKTYLLR+INAALN++LFF IANH  TVV  DA Y  P+ T++V++ PGQTT+VLLK  +P+                    +  T  GI+ Y      +   + I P+LP  N T  A  F      L+        P+ VD++
Sbjct:  161 KQVPILFGEWFNADPQAVVQQALQTGAGPNASDAHTFNGLPGPLYNCSTKDTYKLMVKPGKTYLLRLINAALNDELFFTIANHTLTVVEADACYVKPFQTNIVLLGPGQTTNVLLKT-KPIYPNATFYMLARPYFTGQGTIDNTTVAGILQYQHHTKSSKNLSIIKPSLPPINSTSYAANFTKMFRSLASSTFPANVPKVVDKQ 363          
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC10_ARATH (Laccase-10 OS=Arabidopsis thaliana GN=LAC10 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.292e-35
Identity = 84/199 (42.21%), Postives = 108/199 (54.27%), Query Frame = 3
Query:    6 KEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSXXXXXXXXXXXXXTLVAFNMNTTRGIVVYDGASTANPI-MPALPAYNDTPTAYTFYSNITGLSGGPQWVPCPRRVD 599
            +E  I+LGEWW  D   V N    +G+ P +SDA  ING PG +  C     +KL VE GKTY+LR+INAALN +LFFKIA H+FTVV VDA Y  P+ TD ++IAPGQTT  L+ A +P G               +VA +  T    V Y G  +A P    + P  N T  A TF +++  L+        P  VD
Sbjct:  156 REEVIILGEWWKSDTETVVNEALKSGLAPNVSDAHVINGHPGFVPNCPSQGNFKLAVESGKTYMLRLINAALNEELFFKIAGHRFTVVEVDAVYVKPFNTDTILIAPGQTTTALVSAARPSGQ--YLIAAAPFQDSAVVAVDNRTATATVHYSGTLSATPTKTTSPPPQNATSVANTFVNSLRSLNSKTYPANVPITVD 352          
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC5_ORYSJ (Putative laccase-5 OS=Oryza sativa subsp. japonica GN=LAC5 PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.204e-35
Identity = 84/203 (41.38%), Postives = 106/203 (52.22%), Query Frame = 3
Query:   15 PIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSXXXXXXXXXXXXXTLVAFNMNTTRGIVVY-----DGASTANPIMPALPAYNDTPTAYTFYSNITGLSGGPQWVPCPRRVDERM 608
            PI+ GEW+N D   V N+   TG GP ISDA+T NG PG  Y CS   TYK+KV+ G+TYLLR+IN+ALN++LFF IANH  TVV  DA Y  P+    +VI+PGQT ++LL      GS             T   F+  T   ++ Y           N  +P LP YNDT     F S    L+        PR VD  +
Sbjct:  173 PIMFGEWFNADTEAVINQALQTGAGPNISDAYTFNGLPGPTYNCSSKDTYKVKVQPGRTYLLRLINSALNDELFFGIANHTLTVVEADANYVKPFTAKTLVISPGQTMNLLLTTAPNPGS-PVYAMAIAPYTNTQGTFDNTTAVAVLEYAPTRASATGNNNLPLPPLPRYNDTNAVANFSSKFRSLATARYPARVPRAVDRHV 374          
The following BLAST results are available for this feature:
BLAST of CX291041 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
LAC5_ARATH1.249e-3840.93Laccase-5 OS=Arabidopsis thaliana GN=LAC5 PE=2 SV=... [more]
LAC10_ORYSJ2.130e-3844.12Laccase-10 OS=Oryza sativa subsp. japonica GN=LAC1... [more]
LAC1_ORYSJ4.746e-3841.23Putative laccase-1 OS=Oryza sativa subsp. japonica... [more]
LAC21_ORYSJ6.198e-3839.71Laccase-21 OS=Oryza sativa subsp. japonica GN=LAC2... [more]
LAC17_ARATH1.057e-3742.99Laccase-17 OS=Arabidopsis thaliana GN=LAC17 PE=2 S... [more]
LAC11_ORYSJ1.381e-3742.65Putative laccase-11 OS=Oryza sativa subsp. japonic... [more]
LAC2_ORYSJ2.355e-3742.03Laccase-2 OS=Oryza sativa subsp. japonica GN=LAC2 ... [more]
LAC2_ARATH7.577e-3642.16Laccase-2 OS=Arabidopsis thaliana GN=LAC2 PE=2 SV=... [more]
LAC10_ARATH1.292e-3542.21Laccase-10 OS=Arabidopsis thaliana GN=LAC10 PE=2 S... [more]
LAC5_ORYSJ2.204e-3541.38Putative laccase-5 OS=Oryza sativa subsp. japonica... [more]

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Properties
Property NameValue
Genbank descriptionC03003C08SK OF2 Citrus clementina cDNA clone C03003C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291041 ID=CX291041; Name=CX291041; organism=Citrus clementina; type=EST; length=609bp
CCGATAAAGAAGTTCCCATTGTTCTCGGAGAGTGGTGGAATGACGATATC
ATGGATGTTGCCAACCGAGGGGAAATTACCGGTGTAGGTCCTAGAATTTC
CGATGCTTTCACCATCAATGGAAGGCCTGGAGACCTCTATCCCTGCTCGG
AAAATCAAACATACAAGCTTAAGGTTGAGAAAGGGAAGACCTATCTCCTA
CGTATTATCAACGCTGCACTCAATAACCAGCTCTTCTTCAAGATAGCCAA
TCACAAATTTACAGTCGTCGCCGTTGACGCTGGGTACACTGATCCCTACG
TCACCGATGTGGTGGTGATAGCTCCCGGCCAAACCACTGACGTTCTGCTA
AAAGCCGACCAGCCAGTGGGTTCTTATTACATGGCTGCAAGAGCATACGC
TGCCCCGCCGCCGACGCTAGTAGCGTTCAATATGAACACCACGAGAGGCA
TCGTTGTCTACGATGGTGCCAGCACGGCCAATCCTATAATGCCAGCCTTA
CCAGCTTACAATGATACGCCTACAGCCTACACATTTTACAGTAATATAAC
TGGATTAAGTGGTGGACCTCAATGGGTCCCATGCCCACGTCGAGTGGATG
AACGTATGT
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