CX291041

Overview
NameCX291041
Unique NameCX291041
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length609
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig345 contig Ccv1_Contig345:562..1170. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC22_ORYSJ (Laccase-22 OS=Oryza sativa subsp. japonica GN=LAC22 PE=2 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 2.879e-35
Identity = 73/123 (59.35%), Postives = 90/123 (73.17%), Query Frame = 3
Query:    6 KEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQT-YKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVG 371
            KE  IVLGEWW +D   V N+    GVGP ISD+ TING PG L  C+ +Q  +KL VE GKTY+LRIINAALN+ LFFK+A H+ TVV VDA YT P+ TD ++I PGQTT+VL++A+Q  G
Sbjct:  162 KEAVIVLGEWWKEDTETVINQAMQLGVGPNISDSHTINGHPGPLSECASSQDGFKLSVENGKTYMLRIINAALNDDLFFKVAGHELTVVEVDAVYTKPFKTDTLLITPGQTTNVLVRANQGAG 284          
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC4_ARATH (Laccase-4 OS=Arabidopsis thaliana GN=IRX12 PE=2 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 3.760e-35
Identity = 84/203 (41.38%), Postives = 112/203 (55.17%), Query Frame = 3
Query:    3 DKEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSXXXXXXXXXXXXXTLVAFNMNTTRGIVVYDGASTANP-IMPALPAYNDTPTAYTFYSNITGLSGGPQWVPCPRRVDERM 608
            D E  IVLGEWW  D  ++ N    +G+ P +SD+  ING PG +  C  +Q YKL VE GKTYLLR++NAALN +LFFK+A H FTVV VDA Y  P+ TD V+IAPGQTT+VLL A +  G                +A +  T    V Y G  +++P I+   P  N T  A  F +++  L+        P  +D  +
Sbjct:  157 DNEKVIVLGEWWKSDTENIINEALKSGLAPNVSDSHMINGHPGPVRNCP-SQGYKLSVENGKTYLLRLVNAALNEELFFKVAGHIFTVVEVDAVYVKPFKTDTVLIAPGQTTNVLLTASKSAGKYLVTASPFMDAP---IAVDNVTATATVHYSGTLSSSPTILTLPPPQNATSIANNFTNSLRSLNSKKYPALVPTTIDHHL 355          
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC14_ORYSJ (Laccase-14 OS=Oryza sativa subsp. japonica GN=LAC14 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 6.414e-35
Identity = 92/208 (44.23%), Postives = 118/208 (56.73%), Query Frame = 3
Query:    9 EVPIVLGEWWNDD--IMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSXXXXXXXXXXXXXTLVAFNMNTTRGIVVYD----GASTANPIMPALPAYNDTPTAYTFYSNITGL--SGGPQWVPCPRRVDERM 608
            E  ++LGEWWN    ++DV  +  +TG  P  S A TING PG  +  +  + + L+V +G TYLLR++NAALN QLFFK+A H FTVVAVDA YTDPY TDV+VIAPGQT D L+ A    G                 A    T R ++ YD     A+    + P +P  ND+ TA  FY ++TGL   G P     P+RVD RM
Sbjct:  169 EHTLLLGEWWNASATLVDVERQAFLTGGQPANSVALTINGMPGLSH--AHKEMHHLRVARGNTYLLRLVNAALNYQLFFKVAAHNFTVVAVDACYTDPYHTDVIVIAPGQTVDALMHAGAAPGRRYYVAAQVYQSIAN--ATYSATARALLRYDDDAKDAAKTIIMSPRMPVLNDSATAQRFYGSLTGLLRDGKP---TVPQRVDTRM 369          
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC14_ARATH (Laccase-14 OS=Arabidopsis thaliana GN=LAC14 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.429e-34
Identity = 77/180 (42.78%), Postives = 108/180 (60.00%), Query Frame = 3
Query:    6 KEVPIVLGEWWN-DDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSXXXXXXXXXXXXXTLVAFNMNTTRGIVVYDG--ASTANPIMPALPAYNDTPTAYTF 536
            +E+P++LGEWW  ++IM +  +   TG  P ISD++TING+PG LYPCS+ +T+K+ V +G+ YLLRIINA ++ +LFF IANH  TVVA D  Y   + +D ++I PGQ+ DVLL A+Q                     F+  TT  I+ Y G   +   PI+P LP YN T  +  F
Sbjct:  167 REIPLILGEWWKKENIMHIPGKANKTGGEPAISDSYTINGQPGYLYPCSKPETFKITVVRGRRYLLRIINAVMDEELFFAIANHTLTVVAKDGFYLKHFKSDYLMITPGQSMDVLLHANQRPNHYFVAARAYSSAFG--AGFDKTTTTAILQYKGDTLNRIKPILPYLPPYNRTEASTRF 344          
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC16_ARATH (Laccase-16 OS=Arabidopsis thaliana GN=LAC16 PE=2 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 1.747e-32
Identity = 80/190 (42.11%), Postives = 102/190 (53.68%), Query Frame = 3
Query:    6 KEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSXXXXXXXXXXXXXTLVAFNMNTTRGIVVYDG-----ASTANPIMPALPAYNDTPTAYTFYSNITGLS 560
            KE  IVL EWW  D+ ++ N     G  P  SDA TING  G +  C    +Y L V  GKTY+LRIINAALN +LFFKIA H  TVV VDA YT PY TD V IAPGQTT+VLL A+   GS               + ++  T    + Y G     +++   ++ +LP  N T  A  F  ++  L+
Sbjct:  160 KEKTIVLSEWWKSDVEELINEASRIGTAPSASDAHTINGHSGSISNCPSQSSYGLPVRAGKTYMLRIINAALNEELFFKIAGHVLTVVEVDAVYTKPYKTDTVFIAPGQTTNVLLTANANAGSNYMVAATTFTDAH--IPYDNVTATATLHYIGHTSTVSTSKKTVLASLPPQNATWVATKFTRSLRSLN 347          
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC15_ORYSJ (Laccase-15 OS=Oryza sativa subsp. japonica GN=LAC15 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 6.637e-32
Identity = 81/186 (43.55%), Postives = 102/186 (54.84%), Query Frame = 3
Query:    6 KEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSE--NQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSXXXXXXXXXXXXXTLVAFNMNTTRGIVVYDGAS--TANPIMPALPAYNDTPTAYTFYSNIT 551
            +EVPI++GEWW  D+  V +R    G     S   TING+ GDL+ CS      Y L VE GKTYLLRIINAAL ++ F KIA H+FTVVA DA Y  PY TDVVVIAPG+T D ++ AD P                         TRG + Y   S  ++   MP +P  +DT  ++ F  N+T
Sbjct:  173 REVPIIIGEWWEKDLPQV-DRNMTNGYFDDYSSGSTINGKLGDLFNCSGVLEDGYVLDVEPGKTYLLRIINAALFSEYFLKIAGHRFTVVASDANYLTPYSTDVVVIAPGETLDAIVVADAPPSGRYYIAAQPIQAPPPDTQTPEYATRGTLQYSSNSRNSSAAAMPEMPHQHDTMRSFYFRGNLT 357          
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC19_ORYSI (Putative laccase-19 OS=Oryza sativa subsp. indica GN=LAC19 PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 8.114e-30
Identity = 77/207 (37.20%), Postives = 121/207 (58.45%), Query Frame = 3
Query:    6 KEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSE--NQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSXXXXXXXXXXXXXTLVAFNMNTTRGIVVYDGASTAN---PI-MPALPAYNDTPTAYTFYSNITGLSGGPQWVPCPRRVDERM 608
            K+VPI++GEWW  D++++ +R  + G       + TING+ GDL  CS    +++ L V+ G++YLLR+IN AL ++ +F++A H FTVV  D  Y  P+ TD+V +APG+  DV++ AD P                      + T+RG+V Y GA+  N   P+ MP +P  ++T  +Y F++N+TGL+  P+    P  VDER+
Sbjct:  161 KDVPIIIGEWWELDLIEL-DRRMMDGNFDDNPLSATINGKLGDLSNCSRMVEESFILDVKHGESYLLRVINTALFSEYYFRVAGHTFTVVGADGNYLTPFKTDMVTVAPGEAIDVIMVADAPPAHYHMIALANQPPEPD-PQIPVFTSRGLVRYAGATANNNGLPVPMPIMPNQHNTMPSYYFHANLTGLA-HPERHRVPMHVDERL 364          
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC19_ORYSJ (Laccase-19 OS=Oryza sativa subsp. japonica GN=LAC19 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.361e-29
Identity = 76/207 (36.71%), Postives = 120/207 (57.97%), Query Frame = 3
Query:    6 KEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSE--NQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSXXXXXXXXXXXXXTLVAFNMNTTRGIVVYDGASTAN---PI-MPALPAYNDTPTAYTFYSNITGLSGGPQWVPCPRRVDERM 608
            K+VPI++GEWW  D++++ +R  + G       + TING+ GDL  CS    +++ L V+ G++YLLR+IN AL ++ +F++A H FTVV  D  Y  P+ TD+V +APG+  DV++ AD P                      + T+RG+V Y G +  N   P+ MP +P  ++T  +Y F++N+TGL+  P+    P  VDER+
Sbjct:  161 KDVPIIIGEWWELDLIEL-DRRMMDGNFDDNPLSATINGKLGDLSNCSRMVEESFILDVKHGESYLLRVINTALFSEYYFRVAGHTFTVVGADGNYLTPFKTDMVTVAPGEAIDVIMVADAPPAHYHMIALANQPPEPD-PQIPVFTSRGLVRYAGTTANNNGLPVPMPIMPNQHNTMPSYYFHANLTGLA-HPERHRVPMHVDERL 364          
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC18_ORYSI (Putative laccase-18 OS=Oryza sativa subsp. indica GN=LAC18 PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.361e-29
Identity = 80/209 (38.28%), Postives = 120/209 (57.42%), Query Frame = 3
Query:    6 KEVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSEN--QTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSXXXXXXXXXXXXXTLVAFNMNTTRGIVVYDGAS-TANPI---MPALPAYNDTPTAYTFYSNITGLS--GGPQWVPCPRRVDERM 608
            K+VPI++GEWW  D++++ +R  + G       + TING+ GDL  CS    +++ L V++G++YLLR+IN AL ++ +FK+A H FTVV  D  Y  PY TD+V +APG+  DVL+ AD P                 L    + T+RG+V Y GA+  +N +   MP +P  ++T  +Y F  N+TGL+     Q    P  VDER+
Sbjct:  162 KDVPIIIGEWWELDLIEL-DRRMLDGNFDDNPLSATINGKLGDLSNCSGTVEESFVLDVKRGESYLLRVINTALFSEYYFKVAGHTFTVVGADGNYLTPYKTDMVTVAPGEAIDVLMFADAPPAYYHMVALANQPPPPDLQIPQL-TSRGLVRYTGAAMDSNNLPMPMPVMPDQHNTMPSYYFRRNLTGLALPEQQQRHRVPAHVDERL 368          
BLAST of CX291041 vs. ExPASy Swiss-Prot
Match: LAC6_ARATH (Laccase-6 OS=Arabidopsis thaliana GN=LAC6 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 4.027e-29
Identity = 74/201 (36.82%), Postives = 106/201 (52.74%), Query Frame = 3
Query:    9 EVPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGRPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSXXXXXXXXXXXXXTLVAFNMNTTRGIVVYDGASTANPIMPA-LPAYNDTPTAYTFYSNITGLSGGPQWVPCPRRVDERM 608
            E  I+LGE+W  +++++      +G  P  +DAFTING+PG  Y CS    Y++++   K YLLR+INA +N + FF IANH+ T+V VD  YT PY T+ V++ PGQT ++L+ ADQ VG                V F   +      Y GA   N  +PA LP +ND     T    +  L+     V  PR +D  +
Sbjct:  164 EHTILLGEYWLKNVVELEQHVLESGGPPPPADAFTINGQPGPNYNCSSKDVYEIQIVPRKIYLLRLINAGINMETFFTIANHRLTIVEVDGEYTKPYTTERVMLVPGQTMNILVTADQTVGRYSMAMGPYESAKN--VKFQNTSAIANFQYIGALPNNVTVPAKLPIFNDNIAVKTVMDGLRSLNA----VDVPRNIDAHL 358          
The following BLAST results are available for this feature:
BLAST of CX291041 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
LAC22_ORYSJ2.879e-3559.35Laccase-22 OS=Oryza sativa subsp. japonica GN=LAC2... [more]
LAC4_ARATH3.760e-3541.38Laccase-4 OS=Arabidopsis thaliana GN=IRX12 PE=2 SV... [more]
LAC14_ORYSJ6.414e-3544.23Laccase-14 OS=Oryza sativa subsp. japonica GN=LAC1... [more]
LAC14_ARATH1.429e-3442.78Laccase-14 OS=Arabidopsis thaliana GN=LAC14 PE=2 S... [more]
LAC16_ARATH1.747e-3242.11Laccase-16 OS=Arabidopsis thaliana GN=LAC16 PE=2 S... [more]
LAC15_ORYSJ6.637e-3243.55Laccase-15 OS=Oryza sativa subsp. japonica GN=LAC1... [more]
LAC19_ORYSI8.114e-3037.20Putative laccase-19 OS=Oryza sativa subsp. indica ... [more]
LAC19_ORYSJ2.361e-2936.71Laccase-19 OS=Oryza sativa subsp. japonica GN=LAC1... [more]
LAC18_ORYSI2.361e-2938.28Putative laccase-18 OS=Oryza sativa subsp. indica ... [more]
LAC6_ARATH4.027e-2936.82Laccase-6 OS=Arabidopsis thaliana GN=LAC6 PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionC03003C08SK OF2 Citrus clementina cDNA clone C03003C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291041 ID=CX291041; Name=CX291041; organism=Citrus clementina; type=EST; length=609bp
CCGATAAAGAAGTTCCCATTGTTCTCGGAGAGTGGTGGAATGACGATATC
ATGGATGTTGCCAACCGAGGGGAAATTACCGGTGTAGGTCCTAGAATTTC
CGATGCTTTCACCATCAATGGAAGGCCTGGAGACCTCTATCCCTGCTCGG
AAAATCAAACATACAAGCTTAAGGTTGAGAAAGGGAAGACCTATCTCCTA
CGTATTATCAACGCTGCACTCAATAACCAGCTCTTCTTCAAGATAGCCAA
TCACAAATTTACAGTCGTCGCCGTTGACGCTGGGTACACTGATCCCTACG
TCACCGATGTGGTGGTGATAGCTCCCGGCCAAACCACTGACGTTCTGCTA
AAAGCCGACCAGCCAGTGGGTTCTTATTACATGGCTGCAAGAGCATACGC
TGCCCCGCCGCCGACGCTAGTAGCGTTCAATATGAACACCACGAGAGGCA
TCGTTGTCTACGATGGTGCCAGCACGGCCAATCCTATAATGCCAGCCTTA
CCAGCTTACAATGATACGCCTACAGCCTACACATTTTACAGTAATATAAC
TGGATTAAGTGGTGGACCTCAATGGGTCCCATGCCCACGTCGAGTGGATG
AACGTATGT
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