CX291062

Overview
NameCX291062
Unique NameCX291062
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length590
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291062 vs. ExPASy Swiss-Prot
Match: PER57_ARATH (Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 4.284e-41
Identity = 84/185 (45.41%), Postives = 121/185 (65.41%), Query Frame = 2
Query:    2 AQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHTIGQARCVAFRNRI 556
            AQL   FYS++CP+    V++ V+        + A+LLR+HFHDCFV GCD S+L+D T+S   EKT+GPN  S R F+++D IK+++E  CP  VSCADI+ +A R SVA+ GGPS+++  GRRD + ++        +P PT ++S  ++ F  KG++  D VAL GAHT+GQ  C  F +RI
Sbjct:   22 AQLRVGFYSQSCPQAETIVRNLVRQRFGVTPTVTAALLRMHFHDCFVKGCDASLLIDSTNS---EKTAGPN-GSVREFDLIDRIKAQLEAACPSTVSCADIVTLATRDSVALAGGPSYSIPTGRRDGRVSNNLDV---TLPGPTISVSGAVSLFTNKGMNTFDAVALLGAHTVGQGNCGLFSDRI 199          
BLAST of CX291062 vs. ExPASy Swiss-Prot
Match: PER28_ARATH (Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 4.284e-41
Identity = 83/187 (44.39%), Postives = 123/187 (65.78%), Query Frame = 2
Query:    2 AQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHTIGQARCVAFRNRIYN 562
            AQL   FYS++CP     V++ V+   +++  + A+L R+HFHDCFV GCD S+L+D T+S   EK +GPN  S RGFE++D+IK+ +E  CP  VSC+DI+ +A R +V + GGPS+ V  GRRD   ++   AN  ++PPP  ++  +++ F  KG++  D VAL GAHT+G A C  F +R+ N
Sbjct:   21 AQLKFKFYSESCPNAETIVENLVRQQFARDPSITAALTRMHFHDCFVQGCDASLLIDPTTSQLSEKNAGPNF-SVRGFELIDEIKTALEAQCPSTVSCSDIVTLATRDAVFLGGGPSYVVPTGRRDGFVSNPEDANE-ILPPPFISVEGMLSFFGNKGMNVFDSVALLGAHTVGIASCGNFVDRVTN 205          
BLAST of CX291062 vs. ExPASy Swiss-Prot
Match: PER12_ARATH (Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=1 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.246e-40
Identity = 82/185 (44.32%), Postives = 120/185 (64.86%), Query Frame = 2
Query:    8 LSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNIN-SARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHTIGQARCVAFRNRIY 559
            LS NFY K CPK+ N ++  ++    ++  + A++LR+HFHDCFV GC+ S+LL  ++S  GE++S PN+    + F V++++++ V+K C  VVSC+DILA+AAR SV + GGP + V LGRRDS   +        +PPP    S LI  F  + L+  D+VALSG HTIG A C +F +R+Y
Sbjct:   44 LSWNFYQKACPKVENIIRKELKKVFKRDIGLAAAILRIHFHDCFVQGCEASVLLAGSASGPGEQSSIPNLTLRQQAFVVINNLRALVQKKCGQVVSCSDILALAARDSVVLSGGPDYAVPLGRRDSLAFASQETTLNNLPPPFFNASQLIADFANRNLNITDLVALSGGHTIGIAHCPSFTDRLY 228          
BLAST of CX291062 vs. ExPASy Swiss-Prot
Match: PER62_ARATH (Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 2.777e-40
Identity = 87/184 (47.28%), Postives = 116/184 (63.04%), Query Frame = 2
Query:   20 FYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVAL-SGAHTIGQARCVAFRNRIYNES 568
            FYS TCP     V++ V S    + ++   LLR+H HDCFV GCDGS+LL   +S   E+T+G N+N   GFEV+DD K ++E  CPGVVSCADILA+AAR SV++  G SW V  GRRD + +   A+N   +P P+ +L+    +F A  L+ +D+V L  G HTIG A C    NRI+N S
Sbjct:   29 FYSTTCPNAETIVRTTVASHFGSDPKVAPGLLRMHNHDCFVQGCDGSVLLSGPNS---ERTAGANVN-LHGFEVIDDAKRQLEAACPGVVSCADILALAARDSVSLTNGQSWQVPTGRRDGRVS--LASNVNNLPSPSDSLAIQQRKFSAFRLNTRDLVTLVGGGHTIGTAACGFITNRIFNSS 206          
BLAST of CX291062 vs. ExPASy Swiss-Prot
Match: PER48_ARATH (Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3)

HSP 1 Score: 163.31 bits (412), Expect = 8.078e-40
Identity = 78/187 (41.71%), Postives = 120/187 (64.17%), Query Frame = 2
Query:    8 LSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHTIGQARCVAFRNRIYNES 568
            L  ++Y ++CP     +  A++   +    +   ++RL FHDCF+ GCD S+LLD   + T EK + PN+ S +GF+V+D +KS++E VCPGVVSCAD+L +AAR +V + GGP + ++ GR+DS  A    A    +P P +TLS ++ RF  +G + ++ V+L GAH+IG   C  F+NR+YN S
Sbjct:   68 LHYDYYRESCPTAEKIIAKAIRDIYNVTPSVAPPIIRLLFHDCFIEGCDASVLLDADEAHTSEKDASPNL-SLKGFDVIDAVKSELENVCPGVVSCADLLVLAAREAVLVAGGPFYPLETGRKDSAAAYRDFAEH-ELPAPDATLSVILQRFSFRGFNERETVSLFGAHSIGITHCTFFKNRLYNFS 252          
BLAST of CX291062 vs. ExPASy Swiss-Prot
Match: PERN_IPOBA (Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.055e-39
Identity = 81/165 (49.09%), Postives = 113/165 (68.48%), Query Frame = 2
Query:   44 LLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGV-VSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHTIGQARC 535
            + + VK  V +A++ E RMGASL+RLHFHDCFV+GCDG ILL+DT++FTGE+ +  N NS RGF V+D  K   +  C    VSCAD+LAIAAR +       ++N+ LGR+D++TA+L  AN+  +P P   LS    +F  KG + ++MV L+GAHT+G +RC
Sbjct:   72 VFSAVKEIVDAAITAETRMGASLIRLHFHDCFVDGCDGGILLNDTANFTGEQGAPANSNSVRGFSVIDQAKRNAQTKCADTPVSCADVLAIAARDAFRKFTNQTYNITLGRQDARTANLTGANT-QLPAPFDNLSIQTAKFADKGFNQREMVVLAGAHTVGFSRC 235          
BLAST of CX291062 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.055e-39
Identity = 80/186 (43.01%), Postives = 121/186 (65.05%), Query Frame = 2
Query:    2 AQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNIN-SARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHTIGQARCVAFRNRI 556
            + L+ +FYSK+CPK L+ ++  + +         A+ LRL FHDCF NGCD S+L+  T+  T E+ S  N++    GF+VV   K+ +E  CP  VSC+DI+A+A R  +  +GGP + + LGRRDS+T S ++  S ++P P+  +S LI++F ++G S ++MVALSGAHTIG + C  F NR+
Sbjct:   30 SHLTVDFYSKSCPKFLDIIRETITNKQISTPTTAAAALRLFFHDCFPNGCDASVLVSSTAFNTAERDSSINLSLPGDGFDVVIRAKTALELACPNTVSCSDIIAVAVRDLLVTVGGPYYEISLGRRDSRT-SKSSLVSDLLPLPSMQISKLIDQFSSRGFSVQEMVALSGAHTIGFSHCKEFTNRV 214          
BLAST of CX291062 vs. ExPASy Swiss-Prot
Match: PERA_IPOBA (Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.070e-39
Identity = 81/165 (49.09%), Postives = 115/165 (69.70%), Query Frame = 2
Query:   44 LLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGV-VSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHTIGQARC 535
            + + VK  V +A++ E RMGASL+RL FHDCFV+GCD  +LL+DT++FTGE+T+  N NS RGF V++  K  V+   P + VSCADIL+IAAR S     G ++ V LGR+D++TA+   AN+ ++  P   L++ + +F AKG +  +MVAL G+HTIG ARC
Sbjct:   71 VFSAVKEVVVAAINAEARMGASLIRLFFHDCFVDGCDAGLLLNDTATFTGEQTAAGNNNSVRGFAVIEQAKQNVKTQMPDMSVSCADILSIAARDSFEKFSGSTYTVTLGRKDARTANFTGANTQLV-GPNENLTSQLTKFAAKGFNGTEMVALLGSHTIGFARC 234          
BLAST of CX291062 vs. ExPASy Swiss-Prot
Match: PER43_ARATH (Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=2 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 4.009e-39
Identity = 81/187 (43.32%), Postives = 120/187 (64.17%), Query Frame = 2
Query:    2 AQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHTIGQARCVAFRNRIYN 562
            A L   FYS TCP+  + VK  V  A   +  + A LLRLHFHDCFV GCDGSIL+++ +    EK +  +    RGFE+V+ +K+++E  CPGVVSC+DI+A+AAR ++++  GP++ V  GRRD + ++++ A    +P  + ++  L  +F  KGL+AKD+V LS AHTIG   C     R+Y+
Sbjct:   24 ANLEVGFYSNTCPQAESIVKRVVSGAALSDPNLPAILLRLHFHDCFVEGCDGSILVNNGA--ISEKNAFGH-EGVRGFEIVEAVKAELEAACPGVVSCSDIVALAARDAISLANGPAYEVPTGRRDGRVSNMSLAKD--MPEVSDSIEILKAKFMQKGLNAKDLVLLSAAHTIGTTACFFMSKRLYD 205          
BLAST of CX291062 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 6.839e-39
Identity = 76/186 (40.86%), Postives = 125/186 (67.20%), Query Frame = 2
Query:    2 AQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNIN-SARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHTIGQARCVAFRNRI 556
            ++L+TNFYSKTCP+ L+ ++  + +         A+++RL FHDCF NGCD S+L+  T+  T E+ S  N++    GF+V+   K+ +E  CP  VSC+DI+++A R  +  +GGP ++V LGRRDS+T S ++  + ++P P++ +S +I +F++KG + ++MVALSGAH+IG + C  F  R+
Sbjct:   19 SRLTTNFYSKTCPRFLDIIRDTITNKQITNPTTAAAVIRLFFHDCFPNGCDASVLISSTAFNTAERDSSINLSLPGDGFDVIVRAKTALELACPNTVSCSDIISVATRDLLITVGGPYYDVFLGRRDSRT-SKSSLLTDLLPLPSTPISKIIQQFESKGFTVQEMVALSGAHSIGFSHCKEFVGRV 203          
The following BLAST results are available for this feature:
BLAST of CX291062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PER57_ARATH4.284e-4145.41Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=... [more]
PER28_ARATH4.284e-4144.39Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=... [more]
PER12_ARATH1.246e-4044.32Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=... [more]
PER62_ARATH2.777e-4047.28Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=... [more]
PER48_ARATH8.078e-4041.71Putative Peroxidase 48 OS=Arabidopsis thaliana GN=... [more]
PERN_IPOBA1.055e-3949.09Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER63_ARATH1.055e-3943.01Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PERA_IPOBA3.070e-3949.09Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER43_ARATH4.009e-3943.32Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=... [more]
PER31_ARATH6.839e-3940.86Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC03003F02SK OF2 Citrus clementina cDNA clone C03003F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291062 ID=CX291062; Name=CX291062; organism=Citrus clementina; type=EST; length=590bp
TGCTCAACTCTCTACTAATTTCTATTCAAAAACTTGTCCAAAATTGTTGA
ATACGGTTAAATCTGCTGTTCAATCAGCAGTTTCAAAAGAGCGTCGGATG
GGCGCTTCTCTCCTTCGCTTACACTTTCATGACTGTTTCGTCAACGGGTG
TGATGGATCAATTCTACTAGATGACACGTCATCTTTCACTGGTGAGAAGA
CTTCAGGACCAAATATCAATTCAGCAAGAGGATTTGAAGTTGTTGATGAT
ATAAAATCAAAGGTAGAGAAAGTTTGCCCAGGAGTCGTTTCATGCGCTGA
TATTTTAGCCATTGCTGCTCGGCATTCAGTTGCAATTCTAGGAGGGCCAA
GTTGGAATGTTAAACTTGGAAGAAGGGACTCCAAAACAGCTAGCTTAGCT
GCTGCTAATAGTGGTGTCATTCCTCCTCCTACCTCCACTCTAAGCAACCT
CATCAATAGATTCCAGGCTAAAGGTCTCTCTGCCAAGGACATGGTTGCTT
TATCCGGAGCGCATACAATTGGGCAAGCAAGGTGTGTAGCCTTCAGAAAT
CGCATATACAATGAAAGCAACATTGAAAGTTCATTTGCAA
back to top