CX291080

Overview
NameCX291080
Unique NameCX291080
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length523
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291080 vs. ExPASy Swiss-Prot
Match: NDUV1_NEUCR (NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial OS=Neurospora crassa GN=nuo-51 PE=2 SV=2)

HSP 1 Score: 269.626 bits (688), Expect = 6.171e-72
Identity = 124/166 (74.70%), Postives = 142/166 (85.54%), Query Frame = 2
Query:   26 RPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPIILRRGPDWFAGFGRKNNSGTK 523
            +P YLVVNADE EPGTCKDREIMR DPHKL+EGCL+AG  M A+AAYIYIRGE++ E   L+ A  EAYA GL+GKNACGSGYDFDV++H GAGAY+CGEET+L+ESLEGK GKPRLKPPFPA  GL+GCP+TV NVETVAV+P I RRG +WFAGFGR+ N GTK
Sbjct:  121 KPRYLVVNADEGEPGTCKDREIMRKDPHKLVEGCLVAGRAMNATAAYIYIRGEFIQEAAILQNAINEAYADGLIGKNACGSGYDFDVYLHRGAGAYVCGEETSLIESLEGKPGKPRLKPPFPAAVGLFGCPSTVANVETVAVAPTICRRGGNWFAGFGRERNQGTK 286          
BLAST of CX291080 vs. ExPASy Swiss-Prot
Match: NDUV1_ASPNG (NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial OS=Aspergillus niger GN=NUO51 PE=3 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 5.776e-70
Identity = 120/166 (72.29%), Postives = 140/166 (84.34%), Query Frame = 2
Query:   26 RPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPIILRRGPDWFAGFGRKNNSGTK 523
            RP YLVVNADE EPGTCKDREIMR DP KL+EGCL+ G  M A+AAY+YIRGE+  E   L+RA  EAY AGL+GKNACG+GYDFDV+IH G GAY+CGEET+L+ES+EGK GKPRLKPPFPA  GL+GCP+TVTNVETVAV+P I+RRG  WF+ FGR+ N+GTK
Sbjct:  123 RPRYLVVNADEGEPGTCKDREIMRKDPQKLIEGCLVVGRAMNANAAYMYIRGEFYQEATVLQRAINEAYEAGLIGKNACGTGYDFDVYIHRGMGAYVCGEETSLIESIEGKAGKPRLKPPFPAAVGLFGCPSTVTNVETVAVTPTIMRRGASWFSSFGRERNAGTK 288          
BLAST of CX291080 vs. ExPASy Swiss-Prot
Match: NUOF1_RHIME (NADH-quinone oxidoreductase subunit F 1 OS=Rhizobium meliloti GN=nuoF1 PE=3 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 3.744e-69
Identity = 121/173 (69.94%), Postives = 141/173 (81.50%), Query Frame = 2
Query:    5 VPNSARGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPIILRRGPDWFAGFGRKNNSGTK 523
            +P  + GRP YLVVNADESEPGTCKDR+IMRHDPH L+EGC+IA   M A AAYIY+RGE++ ER+ L+ A  E Y  GLLGKN    GYD D+++H+GAGAYICGEETALLESLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+P ILRRG  W+  FGR NN GTK
Sbjct:   69 MPKESDGRPHYLVVNADESEPGTCKDRDIMRHDPHTLIEGCVIASFAMGAHAAYIYVRGEFIREREALQAAIDECYEYGLLGKNN-KLGYDIDIYVHHGAGAYICGEETALLESLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVTPTILRRGAGWYTSFGRPNNHGTK 240          
BLAST of CX291080 vs. ExPASy Swiss-Prot
Match: NUOF_RICBR (NADH-quinone oxidoreductase subunit F OS=Rickettsia bellii (strain RML369-C) GN=nuoF PE=3 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 6.386e-69
Identity = 116/166 (69.88%), Postives = 141/166 (84.94%), Query Frame = 2
Query:   26 RPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPIILRRGPDWFAGFGRKNNSGTK 523
            +PSYLVVNADESEPGTCKDR+I+R++PHKL+EGCL+A   + A++ YIYIRGE+ NE  N++RA  EAY  GL+GKNACGSG++ D+++H GAGAYICGEETALLESLEGK+G PRLKPPFPA  GLYGCPTT+ NVE++AV P ILRRG  WFA  G+ NN+GTK
Sbjct:   75 KPSYLVVNADESEPGTCKDRDILRYEPHKLIEGCLLASFAIGANSCYIYIRGEFYNEASNIQRALDEAYKDGLIGKNACGSGFNCDIYLHRGAGAYICGEETALLESLEGKKGMPRLKPPFPAGFGLYGCPTTINNVESIAVVPTILRRGASWFASIGKPNNTGTK 240          
BLAST of CX291080 vs. ExPASy Swiss-Prot
Match: NUOF_RICB8 (NADH-quinone oxidoreductase subunit F OS=Rickettsia bellii (strain OSU 85-389) GN=nuoF PE=3 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 6.386e-69
Identity = 116/166 (69.88%), Postives = 141/166 (84.94%), Query Frame = 2
Query:   26 RPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPIILRRGPDWFAGFGRKNNSGTK 523
            +PSYLVVNADESEPGTCKDR+I+R++PHKL+EGCL+A   + A++ YIYIRGE+ NE  N++RA  EAY  GL+GKNACGSG++ D+++H GAGAYICGEETALLESLEGK+G PRLKPPFPA  GLYGCPTT+ NVE++AV P ILRRG  WFA  G+ NN+GTK
Sbjct:   75 KPSYLVVNADESEPGTCKDRDILRYEPHKLIEGCLLASFAIGANSCYIYIRGEFYNEASNIQRALDEAYKDGLIGKNACGSGFNCDIYLHRGAGAYICGEETALLESLEGKKGMPRLKPPFPAGFGLYGCPTTINNVESIAVVPTILRRGASWFASIGKPNNTGTK 240          
BLAST of CX291080 vs. ExPASy Swiss-Prot
Match: NUOF_RICPR (NADH-quinone oxidoreductase subunit F OS=Rickettsia prowazekii GN=nuoF PE=3 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 3.170e-68
Identity = 116/166 (69.88%), Postives = 138/166 (83.13%), Query Frame = 2
Query:   26 RPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPIILRRGPDWFAGFGRKNNSGTK 523
            +P YLVVNADESEPGTCKDR+I+R +PHKL+EGCLIA   + A+  YIYIRGE+ NE  N++RA  EAY  GL+GKNACGSG+D ++++H GAGAYICGEETALLESLEGK+G PRLKPPFPA  GLYGCPTT+ NVE++AV P ILRRG  WFA  G+ NN+GTK
Sbjct:   75 KPCYLVVNADESEPGTCKDRDILRFEPHKLIEGCLIASFAIGANTCYIYIRGEFYNEASNMQRALDEAYKEGLIGKNACGSGFDCNIYLHRGAGAYICGEETALLESLEGKKGMPRLKPPFPAGFGLYGCPTTINNVESIAVVPTILRRGASWFAAIGKPNNTGTK 240          
BLAST of CX291080 vs. ExPASy Swiss-Prot
Match: NUOF_RICTY (NADH-quinone oxidoreductase subunit F OS=Rickettsia typhi GN=nuoF PE=3 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 4.140e-68
Identity = 116/166 (69.88%), Postives = 138/166 (83.13%), Query Frame = 2
Query:   26 RPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPIILRRGPDWFAGFGRKNNSGTK 523
            +P YLVVNADESEPGTCKDR+I+R +PHKL+EGCLIA   + A+  YIYIRGE+ NE  N++RA  EAY  GL+GKNACGSG+D ++++H GAGAYICGEETALLESLEGK+G PRLKPPFPA  GLYGCPTT+ NVE++AV P ILRRG  WFA  G+ NN+GTK
Sbjct:   75 KPCYLVVNADESEPGTCKDRDILRFEPHKLIEGCLIASFAIGANNCYIYIRGEFYNEASNMQRALDEAYTEGLIGKNACGSGFDCNIYLHRGAGAYICGEETALLESLEGKKGMPRLKPPFPAGFGLYGCPTTINNVESIAVVPTILRRGASWFAAIGKPNNTGTK 240          
BLAST of CX291080 vs. ExPASy Swiss-Prot
Match: NUOF_RICCK (NADH-quinone oxidoreductase subunit F OS=Rickettsia canadensis (strain McKiel) GN=nuoF PE=3 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 7.061e-68
Identity = 115/166 (69.28%), Postives = 140/166 (84.34%), Query Frame = 2
Query:   26 RPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPIILRRGPDWFAGFGRKNNSGTK 523
            +P YLVVNADESEPGTCKDR+I+R +PHKL+EGCL+A   + A+  YIYIRGE+ NE  N++RA  EAY  GL+GKNACGSG+D ++++H GAGAYICGEETALLESLEGK+G PRLKPPFPA+ GLYGCPTT+ NVE++AV P ILRRG +WFA  G+ NN+GTK
Sbjct:   75 KPCYLVVNADESEPGTCKDRDILRFEPHKLIEGCLLASFAIGANNCYIYIRGEFYNEASNIQRALDEAYKDGLIGKNACGSGFDCNIYLHCGAGAYICGEETALLESLEGKKGMPRLKPPFPASFGLYGCPTTINNVESIAVVPTILRRGANWFASIGKPNNTGTK 240          
BLAST of CX291080 vs. ExPASy Swiss-Prot
Match: NUOF_RICFE (NADH-quinone oxidoreductase subunit F OS=Rickettsia felis GN=nuoF PE=3 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 9.222e-68
Identity = 118/171 (69.01%), Postives = 141/171 (82.46%), Query Frame = 2
Query:   11 NSARGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPIILRRGPDWFAGFGRKNNSGTK 523
            NSA+  P YLVVNADESEPGTCKDR+I+R +PHKL+EGCL+A   + A+  YIYIRGE+ NE  N++RA  EAY  GL+GKNACGSG+D ++++H GAGAYICGEETALLESLEGK+G PRLKPPFPA  GLYGCPTT+ NVE++AV P ILRRG  WFA  G+ NN+GTK
Sbjct:   72 NSAK--PCYLVVNADESEPGTCKDRDILRFEPHKLIEGCLLASFAIGANDCYIYIRGEFYNEASNIQRALDEAYKDGLIGKNACGSGFDCNIYLHRGAGAYICGEETALLESLEGKKGMPRLKPPFPAGFGLYGCPTTINNVESIAVVPTILRRGASWFASIGKPNNTGTK 240          
BLAST of CX291080 vs. ExPASy Swiss-Prot
Match: NUOF_RICM5 (NADH-quinone oxidoreductase subunit F OS=Rickettsia massiliae (strain Mtu5) GN=nuoF PE=3 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 1.204e-67
Identity = 115/166 (69.28%), Postives = 138/166 (83.13%), Query Frame = 2
Query:   26 RPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPIILRRGPDWFAGFGRKNNSGTK 523
            +P YLVVNADESEPGTCKDR+I+R +PHKL+EGCL+A   + A+  YIYIRGE+ NE  N++RA  EAY  GL+GKNAC SG+D ++++H GAGAYICGEETALLESLEGK+G PRLKPPFPA  GLYGCPTT+ NVE++AV P ILRRG  WFAG G+ NN+GTK
Sbjct:   75 KPCYLVVNADESEPGTCKDRDILRFEPHKLIEGCLLASFAIGANNCYIYIRGEFYNEASNIQRALDEAYKEGLIGKNACDSGFDCNIYLHRGAGAYICGEETALLESLEGKKGMPRLKPPFPAGFGLYGCPTTINNVESIAVVPTILRRGASWFAGIGKPNNTGTK 240          
The following BLAST results are available for this feature:
BLAST of CX291080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
NDUV1_NEUCR6.171e-7274.70NADH-ubiquinone oxidoreductase 51 kDa subunit, mit... [more]
NDUV1_ASPNG5.776e-7072.29NADH-ubiquinone oxidoreductase 51 kDa subunit, mit... [more]
NUOF1_RHIME3.744e-6969.94NADH-quinone oxidoreductase subunit F 1 OS=Rhizobi... [more]
NUOF_RICBR6.386e-6969.88NADH-quinone oxidoreductase subunit F OS=Rickettsi... [more]
NUOF_RICB86.386e-6969.88NADH-quinone oxidoreductase subunit F OS=Rickettsi... [more]
NUOF_RICPR3.170e-6869.88NADH-quinone oxidoreductase subunit F OS=Rickettsi... [more]
NUOF_RICTY4.140e-6869.88NADH-quinone oxidoreductase subunit F OS=Rickettsi... [more]
NUOF_RICCK7.061e-6869.28NADH-quinone oxidoreductase subunit F OS=Rickettsi... [more]
NUOF_RICFE9.222e-6869.01NADH-quinone oxidoreductase subunit F OS=Rickettsi... [more]
NUOF_RICM51.204e-6769.28NADH-quinone oxidoreductase subunit F OS=Rickettsi... [more]

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Properties
Property NameValue
Genbank descriptionC03003G10SK OF2 Citrus clementina cDNA clone C03003G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291080 ID=CX291080; Name=CX291080; organism=Citrus clementina; type=EST; length=523bp
GCTCGTGCCGAATTCGGCACGAGGCCGTCCTTCGTATCTTGTTGTCAATG
CTGATGAAAGTGAACCTGGAACCTGTAAAGACAGGGAAATTATGCGGCAT
GATCCACATAAGTTGTTGGAGGGCTGCTTGATTGCTGGCGTAGGAATGAG
GGCTTCTGCTGCTTACATTTACATAAGGGGTGAATATGTAAATGAACGTA
AAAACCTTGAAAGAGCGAGGCAAGAAGCTTATGCTGCTGGATTGTTGGGC
AAGAATGCCTGCGGATCTGGTTATGATTTTGATGTGCATATCCACTATGG
TGCTGGTGCTTATATTTGTGGTGAAGAGACAGCTCTTTTGGAAAGCCTTG
AAGGTAAACAGGGGAAACCAAGATTGAAGCCTCCTTTCCCTGCTAATGCA
GGTTTATATGGTTGTCCCACCACTGTCACCAATGTGGAAACTGTGGCCGT
TTCTCCCATCATTTTAAGGCGTGGACCGGACTGGTTTGCTGGTTTTGGCA
GGAAGAACAATTCTGGTACAAAA
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