CX291095

Overview
NameCX291095
Unique NameCX291095
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length631
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291095 vs. ExPASy Swiss-Prot
Match: DHRS4_BOVIN (Dehydrogenase/reductase SDR family member 4 OS=Bos taurus GN=DHRS4 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.826e-15
Identity = 55/185 (29.73%), Postives = 91/185 (49.19%), Query Frame = 3
Query:   72 QRWTVQGMTALVTGGTKGLGHAVVEELAELGATVHTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTT-IRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGVVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTN 623
            +R  +    ALVT  T G+G A+   LA+ GA V   SR + ++   +   K +G  VTG+VC V    +RE+L+     L  G ++ILI+N   +    + ++   E +  ++  N ++   L +   P +   G  SIV++SS+         G  Y  +K A+  L + LA E A+ N+R N
Sbjct:    8 RRNPLDNKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDRAVATLKGEGLSVTGTVCHVGKAEDRERLVATAVKLHGG-VDILISNAAVSPFFGSLMDVPEEVWDKILDVNVKATALLTKAVVPEMAKRGGGSIVIVSSIAAYSPFPSLGP-YNVSKTALLGLTKNLALELAESNVRVN 190          
BLAST of CX291095 vs. ExPASy Swiss-Prot
Match: DHRS4_MOUSE (Dehydrogenase/reductase SDR family member 4 OS=Mus musculus GN=Dhrs4 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.022e-14
Identity = 56/187 (29.95%), Postives = 88/187 (47.06%), Query Frame = 3
Query:   66 LNQRWTVQGMTALVTGGTKGLGHAVVEELAELGATVHTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTT-IRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGVVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTN 623
            L +R  +    ALVT  T G+G A+   LAE GA V   SR + ++   +   + +G  VTG VC V    +REKLI        G ++IL++N          ++ T E +  +++ N  +   + +   P ++  G  S+V++ SV G       G  Y  +K A+  L +  A E A  NIR N
Sbjct:    6 LTRRNPLSNKVALVTASTDGIGFAIARRLAEDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGIVCHVGKAEDREKLITTALKRHRG-IDILVSNAAVNPFFGNLMDVTEEVWDKVLSINVTATAMMIKAVVPEMEKRGGGSVVIVGSVAGFTRFPSLGP-YNVSKTALLGLTKNFAAELAPKNIRVN 190          
BLAST of CX291095 vs. ExPASy Swiss-Prot
Match: SOU1_SCHPO (Sorbose reductase sou1 OS=Schizosaccharomyces pombe GN=sou1 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.335e-14
Identity = 56/191 (29.32%), Postives = 91/191 (47.64%), Query Frame = 3
Query:   66 LNQRWTVQGMTALVTGGTKGLGHAVVEELAELGATVHTC-SRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAED-FSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCG-VVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSV 629
            +   ++++G T L+TGG+ G+G ++ +  A  G+ V     RN+  L          G +     C + +R    +  NQ      G+L+++I N G  I   ++E   ED ++ ++  N   AY   Q A    K  G  S++  +S+ G + +     + Y ATK A+ HLAR LA EWA    R NSV
Sbjct:    1 MTSMFSLKGKTTLITGGSGGIGFSIAKAFAAAGSNVGLLYGRNKKALEYAAELRDKHGVQAKAYSCPIENRSAVIETTNQAVEELGGRLDVMIANAGIAIPHLSLEDKNEDIWTKVVGINLNGAYYTAQAAGHHFKKQGKGSLIFTASMSGHIANWPQQWASYHATKAAVKHLARALAVEWA-PFARVNSV 190          
BLAST of CX291095 vs. ExPASy Swiss-Prot
Match: PECR_PONAB (Peroxisomal trans-2-enoyl-CoA reductase OS=Pongo abelii GN=PECR PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.974e-14
Identity = 54/189 (28.57%), Postives = 89/189 (47.09%), Query Frame = 3
Query:   84 VQGMTALVTGGTKGLGHAVVEELAELGATVHTCSRNEADLSECIRDWK-----TKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIV--LMSSVCGVVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSV 629
            +QG  A+VTGG  G+G A+V+EL ELG+ V   SR    L     + +     TK  +V    C++ +  E   L+     +F GK+N L+NN G          +++ +  ++ TN    + +C+  +         SIV  ++S   G+   V +    GA +  + +L + LA EWA   +R N V
Sbjct:   16 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAAGELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDIF-GKINFLVNNGGGQFLSLAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVSIKTGLPLAVHS----GAARAGVYNLTKSLALEWACSGVRINCV 199          
BLAST of CX291095 vs. ExPASy Swiss-Prot
Match: DHRS4_PONAB (Dehydrogenase/reductase SDR family member 4 OS=Pongo abelii GN=DHRS4 PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 2.974e-14
Identity = 54/187 (28.88%), Postives = 93/187 (49.73%), Query Frame = 3
Query:   66 LNQRWTVQGMTALVTGGTKGLGHAVVEELAELGATVHTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTT-IRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGVVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTN 623
            + +R  +    ALVT  T G+G A+   LA+ GA V   SR + ++ + +   + +G  VTG+VC V    +RE+L+     L  G ++IL++N        + ++ T E +   +  N ++   + +   P ++  G  S+V++SS+    S     S Y  +K A+  L + LA E A  NIR N
Sbjct:    6 MTRRDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVGKAEDRERLVATAVKLHGG-IDILVSNAAVNPFFGSLMDVTEEVWDKTLDINVKAPALMTKAVVPEMEKRGGGSVVIVSSI-AAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVN 190          
BLAST of CX291095 vs. ExPASy Swiss-Prot
Match: DHRS4_HUMAN (Dehydrogenase/reductase SDR family member 4 OS=Homo sapiens GN=DHRS4 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 2.974e-14
Identity = 54/187 (28.88%), Postives = 93/187 (49.73%), Query Frame = 3
Query:   66 LNQRWTVQGMTALVTGGTKGLGHAVVEELAELGATVHTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTT-IRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGVVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTN 623
            + +R  +    ALVT  T G+G A+   LA+ GA V   SR + ++ + +   + +G  VTG+VC V    +RE+L+     L  G ++IL++N        + ++ T E +   +  N ++   + +   P ++  G  S+V++SS+    S     S Y  +K A+  L + LA E A  NIR N
Sbjct:    6 MTRRDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVGKAEDRERLVATAVKLHGG-IDILVSNAAVNPFFGSIMDVTEEVWDKTLDINVKAPALMTKAVVPEMEKRGGGSVVIVSSI-AAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVN 190          
BLAST of CX291095 vs. ExPASy Swiss-Prot
Match: Y2049_STAEQ (Uncharacterized oxidoreductase SERP2049 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP2049 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.625e-14
Identity = 46/182 (25.27%), Postives = 93/182 (51.10%), Query Frame = 3
Query:   84 VQGMTALVTGGTKGLGHAVVEELAELGATVHTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGVVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSV 629
            V+   A+VTG + G+G A+ ++L++ GA++    RNE  L+E  +   T    V+    DV+ +   + ++  V   F G ++I++N+ G ++     +Y  E +  ++  N +   ++ Q   P L    +  I+ ++SV G        ++YGATK A++ + + L  E A+  ++  S+
Sbjct:    4 VKEKVAVVTGASSGIGEAIAKKLSQQGASIVLVGRNEQRLNEIAQQLNTPAKVVS---ADVTVKSNIDDMLKAVIDHF-GHIDIVVNSAGQSLSSKITDYNVEQWDTMIDVNIKGTLHVLQATLPYLLKQSSGHIINLASVSG-FEPTKTNAVYGATKAAIHAITQSLEKELARTGVKVTSI 180          
BLAST of CX291095 vs. ExPASy Swiss-Prot
Match: Y2036_STAES (Uncharacterized oxidoreductase SE_2036 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_2036 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.625e-14
Identity = 46/182 (25.27%), Postives = 93/182 (51.10%), Query Frame = 3
Query:   84 VQGMTALVTGGTKGLGHAVVEELAELGATVHTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGVVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSV 629
            V+   A+VTG + G+G A+ ++L++ GA++    RNE  L+E  +   T    V+    DV+ +   + ++  V   F G ++I++N+ G ++     +Y  E +  ++  N +   ++ Q   P L    +  I+ ++SV G        ++YGATK A++ + + L  E A+  ++  S+
Sbjct:    4 VKEKVAVVTGASSGIGEAIAKKLSQQGASIVLVGRNEQRLNEIAQQLNTPAKVVS---ADVTVKSNIDDMLKAVIDHF-GHIDIVVNSAGQSLSSKITDYNVEQWDTMIDVNIKGTLHVLQATLPYLLKQSSGHIINLASVSG-FEPTKTNAVYGATKAAIHAITQSLEKELARTGVKVTSI 180          
BLAST of CX291095 vs. ExPASy Swiss-Prot
Match: DHRS4_PIG (Dehydrogenase/reductase SDR family member 4 OS=Sus scrofa GN=DHRS4 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.625e-14
Identity = 53/187 (28.34%), Postives = 94/187 (50.27%), Query Frame = 3
Query:   66 LNQRWTVQGMTALVTGGTKGLGHAVVEELAELGATVHTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTT-IRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGVVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTN 623
            + +R  ++   ALVT  T G+G A+   LA+ GA V   SR + ++   +   + +G  VTG+VC V    +RE+L+    +L  G ++IL++N          ++ T E +  ++  N ++   + +   P ++  G  S++++SSV       + G  Y  +K A+  L + LA E A  NIR N
Sbjct:    6 VERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGG-VDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGP-YNVSKTALLGLTKNLAVELAPRNIRVN 190          
BLAST of CX291095 vs. ExPASy Swiss-Prot
Match: PECR_HUMAN (Peroxisomal trans-2-enoyl-CoA reductase OS=Homo sapiens GN=PECR PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.130e-13
Identity = 54/189 (28.57%), Postives = 87/189 (46.03%), Query Frame = 3
Query:   84 VQGMTALVTGGTKGLGHAVVEELAELGATVHTCSRNEADLSECIRDWK-----TKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIV--LMSSVCGVVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSV 629
            +QG  A+VTGG  G+G A+V+EL ELG+ V   SR    L     + +     TK  +V    C++ +  E   L+      F GK+N L+NN G          +++ +  ++ TN    + +C+  +         SIV  ++ +  G    V +    GA +  + +L + LA EWA   IR N V
Sbjct:   16 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTF-GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHS----GAARAGVYNLTKSLALEWACSGIRINCV 199          
The following BLAST results are available for this feature:
BLAST of CX291095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
DHRS4_BOVIN7.826e-1529.73Dehydrogenase/reductase SDR family member 4 OS=Bos... [more]
DHRS4_MOUSE1.022e-1429.95Dehydrogenase/reductase SDR family member 4 OS=Mus... [more]
SOU1_SCHPO1.335e-1429.32Sorbose reductase sou1 OS=Schizosaccharomyces pomb... [more]
PECR_PONAB2.974e-1428.57Peroxisomal trans-2-enoyl-CoA reductase OS=Pongo a... [more]
DHRS4_PONAB2.974e-1428.88Dehydrogenase/reductase SDR family member 4 OS=Pon... [more]
DHRS4_HUMAN2.974e-1428.88Dehydrogenase/reductase SDR family member 4 OS=Hom... [more]
Y2049_STAEQ6.625e-1425.27Uncharacterized oxidoreductase SERP2049 OS=Staphyl... [more]
Y2036_STAES6.625e-1425.27Uncharacterized oxidoreductase SE_2036 OS=Staphylo... [more]
DHRS4_PIG6.625e-1428.34Dehydrogenase/reductase SDR family member 4 OS=Sus... [more]
PECR_HUMAN1.130e-1328.57Peroxisomal trans-2-enoyl-CoA reductase OS=Homo sa... [more]

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Properties
Property NameValue
Genbank descriptionC03004A07SK OF2 Citrus clementina cDNA clone C03004A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291095 ID=CX291095; Name=CX291095; organism=Citrus clementina; type=EST; length=631bp
TGAAGTTCACTTAACTTTTATCACCTTTATTTCGAATGGCGCCTCCGACG
AACGGCAATGGCAGGCTCAATCAGAGATGGACTGTCCAGGGCATGACTGC
GCTTGTAACTGGTGGAACCAAAGGACTAGGTCATGCTGTAGTGGAGGAAC
TGGCTGAGCTTGGTGCCACTGTGCATACATGCTCTAGGAATGAAGCAGAT
CTTAGTGAATGCATACGTGACTGGAAAACCAAAGGCTTCAAAGTCACCGG
TTCAGTGTGCGATGTATCGTCTCGAATTGAACGGGAAAAGCTTATAAACC
AAGTCTCCTCTCTGTTCGATGGAAAACTTAACATTCTCATAAACAACGTC
GGGACGACTATAAGAAAGGCGACTGTGGAGTACACAGCAGAAGATTTCTC
GTTTCTCATGGCTACCAATTTTGAGTCTGCTTACAATCTGTGCCAACTTG
CACATCCTCTTTTGAAAGCTTCGGGGGCAGCAAGTATTGTTCTAATGTCT
TCTGTTTGTGGGGTGGTGTCAGTTGTTGACGCTGGATCCATATATGGAGC
TACGAAAGGAGCCATGAACCATCTTGCGAGGATTTTGGCATGCGAGTGGG
CTCAAGACAATATTAGGACCAATTCTGTCAC
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