CX291095

Overview
NameCX291095
Unique NameCX291095
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length631
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291095 vs. ExPASy Swiss-Prot
Match: HETN_ANASP (Ketoacyl reductase hetN OS=Anabaena sp. (strain PCC 7120) GN=hetN PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 7.325e-13
Identity = 48/162 (29.63%), Postives = 79/162 (48.77%), Query Frame = 3
Query:   81 TVQGMTALVTGGTKGLGHAVVEELAELGATVHTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGVVSVVDAGSIYGATKGAM 566
            T+ G T L+TG ++GLG  +   LA+  ATV   SR+++ L++     K  G K      DV +  +   L+ Q   +  G +++LINN G  I      Y+  +   +  TN  +A  L +L  P +   G+  IV ++S+ G   V    S+Y A+K  +
Sbjct:    3 TLTGKTVLLTGASRGLGVYIARALAKEQATVVCVSRSQSGLAQTCNAVKAAGGKAIAIPFDVRNTSQLSALVQQAQDIV-GPIDVLINNAGIEINGTFANYSLAEIQSIFNTNLLAAMELTRLLLPSMMERGSGRIVNIASLAGKKGVA-FNSVYSASKAGL 162          
BLAST of CX291095 vs. ExPASy Swiss-Prot
Match: UCPA_ECOLI (Oxidoreductase ucpA OS=Escherichia coli (strain K12) GN=ucpA PE=1 SV=3)

HSP 1 Score: 73.559 bits (179), Expect = 9.567e-13
Identity = 49/180 (27.22%), Postives = 86/180 (47.78%), Query Frame = 3
Query:   90 GMTALVTGGTKGLGHAVVEELAELGATVHTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGVVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSV 629
            G TAL+TG  +G+G  +    A  GA +     +  ++ +   +   +G + T  V DV         I +     +G+++IL+NN G     + ++ + +D  F +  N +  +N+ +   P + A     IV+MSSV G +      + Y  TK A+  L + LA E+AQ  IR N++
Sbjct:    6 GKTALITGALQGIGEGIARTFARHGANLILLDISP-EIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEK-EGRIDILVNNAGVCRLGSFLDMSDDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAI 183          
BLAST of CX291095 vs. ExPASy Swiss-Prot
Match: UCPA_ECO57 (Oxidoreductase ucpA OS=Escherichia coli O157:H7 GN=ucpA PE=3 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 9.567e-13
Identity = 49/180 (27.22%), Postives = 86/180 (47.78%), Query Frame = 3
Query:   90 GMTALVTGGTKGLGHAVVEELAELGATVHTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGVVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSV 629
            G TAL+TG  +G+G  +    A  GA +     +  ++ +   +   +G + T  V DV         I +     +G+++IL+NN G     + ++ + +D  F +  N +  +N+ +   P + A     IV+MSSV G +      + Y  TK A+  L + LA E+AQ  IR N++
Sbjct:    6 GKTALITGALQGIGEGIARTFARHGANLILLDISP-EIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEK-EGRIDILVNNAGVCRLGSFLDMSDDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAI 183          
BLAST of CX291095 vs. ExPASy Swiss-Prot
Match: DCXR_HUMAN (L-xylulose reductase OS=Homo sapiens GN=DCXR PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 9.567e-13
Identity = 57/182 (31.32%), Postives = 88/182 (48.35%), Query Frame = 3
Query:   90 GMTALVTGGTKGLGHAVVEELAELGATVHTCSRNEADLSECIRDWKTKGFKVTGSVC-DVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGA-ASIVLMSSVCGVVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSV 629
            G   LVTG  KG+G   V+ L   GA V   SR +ADL   +R+    G +    VC D+      E+ +  V     G +++L+NN    + +  +E T E F      N  +   + Q+    L A G   +IV +SS C   +V +  S+Y +TKGA++ L +++A E     IR N+V
Sbjct:    7 GRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE--CPGIE---PVCVDLGDWEATERALGSV-----GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNH-SVYCSTKGALDMLTKVMALELGPHKIRVNAV 177          
BLAST of CX291095 vs. ExPASy Swiss-Prot
Match: FABG_CHLMU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia muridarum GN=fabG PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.249e-12
Identity = 53/179 (29.61%), Postives = 91/179 (50.84%), Query Frame = 3
Query:   99 ALVTGGTKGLGHAVVEELAELGATVHTCSRNEADLSECIRDWKTK-GFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQ-LAHPLLKASGAASIVLMSSVCGVVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSV 629
            A+VTGG++G+G  + +  AE GA V     NE       +D   K G KV+ ++ DVS        + +  + + G +++++NN G T     +  + E++S ++ TN  S YN+C  +  P++KA   A IV +SS+ G+       + Y A K  +   ++ L+ E    NIR N +
Sbjct:   10 AIVTGGSRGIGFGIAKLFAEHGANVQIWGINEEAGKSAAQDLSDKTGSKVSFALVDVSKNDMVSAQVQKFLAEY-GTIDVVVNNAGITRDSLLMRMSEEEWSSVIDTNLGSIYNVCSAVIRPMIKARSGA-IVNISSIVGLRG-SPGQTNYAAAKAGIIGFSKALSKEVGSKNIRVNCI 185          
BLAST of CX291095 vs. ExPASy Swiss-Prot
Match: Y325_THEMA (Uncharacterized oxidoreductase TM_0325 OS=Thermotoga maritima GN=TM_0325 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.632e-12
Identity = 54/181 (29.83%), Postives = 84/181 (46.41%), Query Frame = 3
Query:   87 QGMTALVTGGTKGLGHAVVEELAELGATVHTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGVVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSV 629
            QG   L+TG   G+G       AE GA V     +E    E +   K+ G +      DV+   + E+++ +    F G+L+IL+NN G        E + EDF   MA N +  + L + A   +K  G   IV +SS  G++  +    +Y  +K A+  L R LA ++    IR N+V
Sbjct:    4 QGKVVLITGAGSGIGKKAAVMFAERGAKVAINDISEEKGKETVELIKSMGGEAAFIFGDVAK--DAEQIVKKTVETF-GRLDILVNNAGIVPYGNIEETSEEDFDKTMAVNVKGPFLLSKYAVEQMKKQGGGVIVNVSSEAGLIG-IPRRCVYSVSKAALLGLTRSLAVDYVDYGIRVNAV 180          
BLAST of CX291095 vs. ExPASy Swiss-Prot
Match: Y182_METEA (Uncharacterized oxidoreductase MexAM1_META1p0182 OS=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) GN=MexAM1_META1p0182 PE=3 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.632e-12
Identity = 57/183 (31.15%), Postives = 88/183 (48.09%), Query Frame = 3
Query:   84 VQGMTALVTGGTKGLGHAVVEELAELG-ATVHTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGVVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSV 629
            ++G  A+VTG +KG+G A+ + LA+ G A V   + ++A     +      G K      DVS  ++   L+      F G+L++L+NN G     A  E T E +  +   N        Q A   L   G  SI+ +SSV   V ++   ++Y  TKGA+N ++ +LA E A   IR N V
Sbjct:    4 LEGKVAVVTGASKGIGAAIAKALAKDGAAVVVNYASSKAGADAVVEAITAAGGKAIAVQADVSQAVQARGLVEAAVQQF-GRLDVLVNNSGVYEFAAIEEVTEEHYRRIFDVNVLGVLLATQAASKHLGEGG--SIINISSVVTDV-LMPTSAVYSGTKGALNAISGVLANELAPRKIRVNVV 182          
BLAST of CX291095 vs. ExPASy Swiss-Prot
Match: KDUD_DICD3 (2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=Dickeya dadantii (strain 3937) GN=kduD PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.784e-12
Identity = 51/185 (27.57%), Postives = 90/185 (48.65%), Query Frame = 3
Query:   78 WTVQGMTALVTGGTKGLGHAVVEELAELGATVHTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQ-LAHPLLKASGAASIVLMSSVCGVVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSV 629
            + +QG  AL+TG   GLG  +   LAE G  +     N  +  E I      G +      D+S       L+ +  + F GK++IL+NN G   R+  +E++ +++  +M  N +S + + Q +A   +K      I+ ++S+      +   S Y A+K  +  + RI+A EWA+ NI  N++
Sbjct:    6 FNLQGKVALITGCDTGLGQGMAVGLAEAGCDI--VGVNIVEPKETIEKVTAVGRRFLSLTADMSDISGHAALVEKAVAEF-GKVDILVNNAGIIRREDAIEFSEKNWDDVMNLNIKSVFFMSQTVARQFIKQGHGGKIINIASMLSFQGGIPVPS-YTASKKRVMGITRIVANEWAKHNINVNAI 186          
BLAST of CX291095 vs. ExPASy Swiss-Prot
Match: FABG_STAAW (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MW2) GN=fabG PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.784e-12
Identity = 52/179 (29.05%), Postives = 88/179 (49.16%), Query Frame = 3
Query:   96 TALVTGGTKGLGHAVVEELAELGATVHTCSRNEADLSECI-RDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGVVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSV 629
            +ALVTG ++G+G ++  +LAE G  V        + +E +  + K KG        +V+   E + +I +V S F G L++L+NN G T     +    +++  ++ TN +  +N  Q A P +    + +I+ +SSV G V      + Y ATK  +  L +  A E A   I  N+V
Sbjct:    6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF-GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQAN-YVATKAGVIGLTKSAARELASRGITVNAV 182          
BLAST of CX291095 vs. ExPASy Swiss-Prot
Match: FABG_STAAS (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MSSA476) GN=fabG PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.784e-12
Identity = 52/179 (29.05%), Postives = 88/179 (49.16%), Query Frame = 3
Query:   96 TALVTGGTKGLGHAVVEELAELGATVHTCSRNEADLSECI-RDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGVVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSV 629
            +ALVTG ++G+G ++  +LAE G  V        + +E +  + K KG        +V+   E + +I +V S F G L++L+NN G T     +    +++  ++ TN +  +N  Q A P +    + +I+ +SSV G V      + Y ATK  +  L +  A E A   I  N+V
Sbjct:    6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF-GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQAN-YVATKAGVIGLTKSAARELASRGITVNAV 182          
The following BLAST results are available for this feature:
BLAST of CX291095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
HETN_ANASP7.325e-1329.63Ketoacyl reductase hetN OS=Anabaena sp. (strain PC... [more]
UCPA_ECOLI9.567e-1327.22Oxidoreductase ucpA OS=Escherichia coli (strain K1... [more]
UCPA_ECO579.567e-1327.22Oxidoreductase ucpA OS=Escherichia coli O157:H7 GN... [more]
DCXR_HUMAN9.567e-1331.32L-xylulose reductase OS=Homo sapiens GN=DCXR PE=1 ... [more]
FABG_CHLMU1.249e-1229.613-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]
Y325_THEMA1.632e-1229.83Uncharacterized oxidoreductase TM_0325 OS=Thermoto... [more]
Y182_METEA1.632e-1231.15Uncharacterized oxidoreductase MexAM1_META1p0182 O... [more]
KDUD_DICD32.784e-1227.572-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=D... [more]
FABG_STAAW2.784e-1229.053-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAS2.784e-1229.053-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC03004A07SK OF2 Citrus clementina cDNA clone C03004A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291095 ID=CX291095; Name=CX291095; organism=Citrus clementina; type=EST; length=631bp
TGAAGTTCACTTAACTTTTATCACCTTTATTTCGAATGGCGCCTCCGACG
AACGGCAATGGCAGGCTCAATCAGAGATGGACTGTCCAGGGCATGACTGC
GCTTGTAACTGGTGGAACCAAAGGACTAGGTCATGCTGTAGTGGAGGAAC
TGGCTGAGCTTGGTGCCACTGTGCATACATGCTCTAGGAATGAAGCAGAT
CTTAGTGAATGCATACGTGACTGGAAAACCAAAGGCTTCAAAGTCACCGG
TTCAGTGTGCGATGTATCGTCTCGAATTGAACGGGAAAAGCTTATAAACC
AAGTCTCCTCTCTGTTCGATGGAAAACTTAACATTCTCATAAACAACGTC
GGGACGACTATAAGAAAGGCGACTGTGGAGTACACAGCAGAAGATTTCTC
GTTTCTCATGGCTACCAATTTTGAGTCTGCTTACAATCTGTGCCAACTTG
CACATCCTCTTTTGAAAGCTTCGGGGGCAGCAAGTATTGTTCTAATGTCT
TCTGTTTGTGGGGTGGTGTCAGTTGTTGACGCTGGATCCATATATGGAGC
TACGAAAGGAGCCATGAACCATCTTGCGAGGATTTTGGCATGCGAGTGGG
CTCAAGACAATATTAGGACCAATTCTGTCAC
back to top