CX291095

Overview
NameCX291095
Unique NameCX291095
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length631
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291095 vs. ExPASy Swiss-Prot
Match: PECR_RAT (Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus GN=Pecr PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.058e-11
Identity = 47/191 (24.61%), Postives = 85/191 (44.50%), Query Frame = 3
Query:   84 VQGMTALVTGGTKGLGHAVVEELAELGATVHTCSRNEADLSECIRDWK-----TKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGVVSVVDAG----SIYGATKGAMNHLARILACEWAQDNIRTNSV 629
            +Q   A+VTGG  G+G A+  EL  LG  V   SR    L+  + + +     +   +VT   C++    E   L+    + + GK+N L+NN G        + TA+ +  ++ TN    + +C+  +         SIV       ++ +++ G    +  GA +  + +L + +A  WA   +R N V
Sbjct:   16 LQNQVAVVTGGATGIGKAISRELLHLGCNVVIASRKLDRLTAAVDELRASQPPSSSTQVTAIQCNIRKEEEVNNLVKSTLAKY-GKINFLVNNAGGQFMAPAEDITAKGWQAVIETNLTGTFYMCKAVYNSWMKDHGGSIV------NIIVLLNNGFPTAAHSGAARAGVYNLTKTMALTWASSGVRINCV 199          
BLAST of CX291095 vs. ExPASy Swiss-Prot
Match: DHRS2_HUMAN (Dehydrogenase/reductase SDR family member 2 OS=Homo sapiens GN=DHRS2 PE=1 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 1.058e-11
Identity = 55/190 (28.95%), Postives = 96/190 (50.53%), Query Frame = 3
Query:   66 LNQRWTVQGMTALVTGGTKGLGHAVVEELAELGATVHTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTT-IRKATVEYTAEDFSFLMATNFES-AYNLCQLAHPLLKASGAASIVLMSSVCGVVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSV 629
            ++++  +    A+VTG T G+G A+   LA  GA V   SR + ++   +   + +G  V G VC V    +RE+L+ +      G ++ L+ + G   +  +T+  + + +  +++ N +S A  L QL   +    GA  ++L+SS+     VV  G +Y  +K A+  L R LA E A  +IR N V
Sbjct:    6 IDRKGVLANRVAVVTGSTSGIGFAIARRLARDGAHVVISSRKQQNVDRAMAKLQGEGLSVAGIVCHVGKAEDREQLVAKALE-HCGGVDFLVCSAGVNPLVGSTLGTSEQIWDKILSVNVKSPALLLSQLLPYMENRRGA--VILVSSIAAYNPVVALG-VYNVSKTALLGLTRTLALELAPKDIRVNCV 191          
BLAST of CX291095 vs. ExPASy Swiss-Prot
Match: DCXR_TRIRE (L-xylulose reductase OS=Trichoderma reesei GN=lxr1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.058e-11
Identity = 59/203 (29.06%), Postives = 89/203 (43.84%), Query Frame = 3
Query:   36 MAPPTNGNGRLNQRWTVQGMTALVTG--GTKGLGHAVVEELAELGA--TVHTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCG-VVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSV 629
            M  P     RL   ++++G   +VTG  G +G+G       AE+GA   +   SR E          K  G KV     + S   + E+ +NQV S F GK++  I N G T     V+ +A D+  ++  +        +      K  G  S+V+ +S+ G V +     + Y   K    HLAR LA EW +D  R NS+
Sbjct:    1 MPQPVPTANRLLDLFSLKGKVVVVTGASGPRGMGIEAARGCAEMGADLAITYSSRKEGAEKNAEELTKEYGVKVKVYKVNQSDYNDVERFVNQVVSDF-GKIDAFIANAGATANSGVVDGSASDWDHVIQVDLSGTAYCAKAVGAHFKKQGHGSLVITASMSGHVANYPQEQTSYNVAKAGCIHLARSLANEW-RDFARVNSI 201          
BLAST of CX291095 vs. ExPASy Swiss-Prot
Match: Y2567_STAAR (Uncharacterized oxidoreductase SAR2567 OS=Staphylococcus aureus (strain MRSA252) GN=SAR2567 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.381e-11
Identity = 46/177 (25.99%), Postives = 84/177 (47.46%), Query Frame = 3
Query:   99 ALVTGGTKGLGHAVVEELAELGATVHTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGVVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSV 629
            A+VTG   G+G A+   L E GA V    RN+  L            KV  +  DV+ + E ++LI      F G L+I+IN+ G  +     +Y  +++  ++  N +      + A P +    +  ++ ++S+ G   V  + +IY ATK A++ + + L  E A+  ++  S+
Sbjct:    9 AVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKDKLQNVANQLAQDSVKVVPT--DVTKKEEVDELIKMAQQTFGG-LDIVINSAGQMLSSKITDYQVDEWDSMIDVNIKGTLYTAKAALPTMLEQSSGHLINIASISG-FEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSI 181          
BLAST of CX291095 vs. ExPASy Swiss-Prot
Match: FABG_STAES (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=fabG PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.381e-11
Identity = 48/179 (26.82%), Postives = 89/179 (49.72%), Query Frame = 3
Query:   96 TALVTGGTKGLGHAVVEELAELGATVHTCSRNEADLSECI-RDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGVVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSV 629
            +ALVTG ++G+G ++  +LAE G  V        D +E +  + K KG +      +V+   E +++I +V S F G +++L+NN G T     +    +++  ++ TN +  +N  Q   P +    + +I+ ++S+ G +      + Y ATK  +  L +  A E A   I  N+V
Sbjct:    4 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKDKAEAVVEEIKAKGVESFAIQANVAKGDEVKEMIKEVVSQF-GSVDVLVNNAGITKDNLLMRMKEQEWDDVIDTNLKGVFNCIQKVTPQMLRQRSGAIINLTSIVGAMGNPGQAN-YVATKAGVIGLTKTAARELASRGITVNAV 180          
BLAST of CX291095 vs. ExPASy Swiss-Prot
Match: FABG_STAEQ (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=fabG PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.381e-11
Identity = 48/179 (26.82%), Postives = 89/179 (49.72%), Query Frame = 3
Query:   96 TALVTGGTKGLGHAVVEELAELGATVHTCSRNEADLSECI-RDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGVVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSV 629
            +ALVTG ++G+G ++  +LAE G  V        D +E +  + K KG +      +V+   E +++I +V S F G +++L+NN G T     +    +++  ++ TN +  +N  Q   P +    + +I+ ++S+ G +      + Y ATK  +  L +  A E A   I  N+V
Sbjct:    4 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKDKAEAVVEEIKAKGVESFAIQANVAKGDEVKEMIKEVVSQF-GSVDVLVNNAGITKDNLLMRMKEQEWDDVIDTNLKGVFNCIQKVTPQMLRQRSGAIINLTSIVGAMGNPGQAN-YVATKAGVIGLTKTAARELASRGITVNAV 180          
BLAST of CX291095 vs. ExPASy Swiss-Prot
Match: FABG_BACSU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Bacillus subtilis GN=fabG PE=3 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 1.381e-11
Identity = 50/179 (27.93%), Postives = 90/179 (50.28%), Query Frame = 3
Query:   96 TALVTGGTKGLGHAVVEELAELGA-TVHTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGVVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSV 629
            TA+VTG ++G+G ++  +LA+ GA  V   S NEA  +E + + K+ G K      DVS+  + + +I +  S+F   ++IL+NN G T     +    +++  ++  N +  +N  +     +    +  I+ +SS+ G VS     + Y A K  +  L +  A E A  NI  N++
Sbjct:    6 TAIVTGASRGIGRSIALDLAKSGANVVVNYSGNEAKANEVVDEIKSMGRKAIAVKADVSNPEDVQNMIKETLSVF-STIDILVNNAGITRDNLIMRMKEDEWDDVININLKGVFNCTKAVTRQMMKQRSGRIINVSSIVG-VSGNPGQANYVAAKAGVIGLTKSSAKELASRNITVNAI 182          
BLAST of CX291095 vs. ExPASy Swiss-Prot
Match: ARDH_CANAL (D-arabinitol 2-dehydrogenase [ribulose-forming] OS=Candida albicans GN=ARD1 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.381e-11
Identity = 57/197 (28.93%), Postives = 91/197 (46.19%), Query Frame = 3
Query:   84 VQGMTALVTGGTKGLGHAVVEELAELGATVHTCSRNEADLSECIRD---WKTKGFK---------VTGSVCDVSSRIEREKLINQVSSLFDGKLN-ILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQ-LAHPLLKASGAASIVLMSSVCG-VVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSV 629
            + G   ++TGG+ GL   V   L   GA V     N     +  RD   W  +  K         V+   C++    E   L  +  +   GK++ +L+N  G        EY A++   LM  N   ++ + Q  A PL++ +   SI+L+ S+ G +V+      +Y  +K  + HLAR LACEWA+ NIR N++
Sbjct:   17 LDGKLVILTGGSGGLAAVVSRALLAKGADVALVDMNLERTQQAARDVLQWGEEQMKGKYESPIGQVSAWSCNIGDA-EAVDLTFKAINEHHGKISSVLVNTAGYAENFPAEEYPAKNAENLMKVNGLGSFYVSQAFARPLIQNNMTGSIILIGSMSGTIVNDPQPQCMYNMSKAGVIHLARSLACEWAKYNIRVNTL 212          
BLAST of CX291095 vs. ExPASy Swiss-Prot
Match: Y2478_STAAM (Uncharacterized oxidoreductase SAV2478 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV2478 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.804e-11
Identity = 46/177 (25.99%), Postives = 85/177 (48.02%), Query Frame = 3
Query:   99 ALVTGGTKGLGHAVVEELAELGATVHTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGVVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSV 629
            A+VTG   G+G A+   L E GA V    RN+  L            KV  +  DV+++ E ++L+      F G L+I+IN+ G  +     +Y  +++  ++  N +      Q A P +    +  ++ ++S+ G   V  + +IY ATK A++ + + L  E A+  ++  S+
Sbjct:    9 AVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKDKLQNVANQLAQDSVKVVPT--DVTNKEEVDELMKIAQQTFGG-LDIVINSAGQMLSSKITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISG-FEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSI 181          
BLAST of CX291095 vs. ExPASy Swiss-Prot
Match: Y2266_STAAN (Uncharacterized oxidoreductase SA2266 OS=Staphylococcus aureus (strain N315) GN=SA2266 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.804e-11
Identity = 46/177 (25.99%), Postives = 85/177 (48.02%), Query Frame = 3
Query:   99 ALVTGGTKGLGHAVVEELAELGATVHTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGVVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSV 629
            A+VTG   G+G A+   L E GA V    RN+  L            KV  +  DV+++ E ++L+      F G L+I+IN+ G  +     +Y  +++  ++  N +      Q A P +    +  ++ ++S+ G   V  + +IY ATK A++ + + L  E A+  ++  S+
Sbjct:    9 AVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKDKLQNVANQLAQDSVKVVPT--DVTNKEEVDELMKIAQQTFGG-LDIVINSAGQMLSSKITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISG-FEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSI 181          
The following BLAST results are available for this feature:
BLAST of CX291095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
PECR_RAT1.058e-1124.61Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus ... [more]
DHRS2_HUMAN1.058e-1128.95Dehydrogenase/reductase SDR family member 2 OS=Hom... [more]
DCXR_TRIRE1.058e-1129.06L-xylulose reductase OS=Trichoderma reesei GN=lxr1... [more]
Y2567_STAAR1.381e-1125.99Uncharacterized oxidoreductase SAR2567 OS=Staphylo... [more]
FABG_STAES1.381e-1126.823-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAEQ1.381e-1126.823-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_BACSU1.381e-1127.933-oxoacyl-[acyl-carrier-protein] reductase OS=Baci... [more]
ARDH_CANAL1.381e-1128.93D-arabinitol 2-dehydrogenase [ribulose-forming] OS... [more]
Y2478_STAAM1.804e-1125.99Uncharacterized oxidoreductase SAV2478 OS=Staphylo... [more]
Y2266_STAAN1.804e-1125.99Uncharacterized oxidoreductase SA2266 OS=Staphyloc... [more]

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Properties
Property NameValue
Genbank descriptionC03004A07SK OF2 Citrus clementina cDNA clone C03004A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291095 ID=CX291095; Name=CX291095; organism=Citrus clementina; type=EST; length=631bp
TGAAGTTCACTTAACTTTTATCACCTTTATTTCGAATGGCGCCTCCGACG
AACGGCAATGGCAGGCTCAATCAGAGATGGACTGTCCAGGGCATGACTGC
GCTTGTAACTGGTGGAACCAAAGGACTAGGTCATGCTGTAGTGGAGGAAC
TGGCTGAGCTTGGTGCCACTGTGCATACATGCTCTAGGAATGAAGCAGAT
CTTAGTGAATGCATACGTGACTGGAAAACCAAAGGCTTCAAAGTCACCGG
TTCAGTGTGCGATGTATCGTCTCGAATTGAACGGGAAAAGCTTATAAACC
AAGTCTCCTCTCTGTTCGATGGAAAACTTAACATTCTCATAAACAACGTC
GGGACGACTATAAGAAAGGCGACTGTGGAGTACACAGCAGAAGATTTCTC
GTTTCTCATGGCTACCAATTTTGAGTCTGCTTACAATCTGTGCCAACTTG
CACATCCTCTTTTGAAAGCTTCGGGGGCAGCAAGTATTGTTCTAATGTCT
TCTGTTTGTGGGGTGGTGTCAGTTGTTGACGCTGGATCCATATATGGAGC
TACGAAAGGAGCCATGAACCATCTTGCGAGGATTTTGGCATGCGAGTGGG
CTCAAGACAATATTAGGACCAATTCTGTCAC
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