CX291096

Overview
NameCX291096
Unique NameCX291096
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length604
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291096 vs. ExPASy Swiss-Prot
Match: CIPKH_ARATH (CBL-interacting serine/threonine-protein kinase 17 OS=Arabidopsis thaliana GN=CIPK17 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.867e-11
Identity = 38/76 (50.00%), Postives = 46/76 (60.53%), Query Frame = 1
Query:  376 GKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKI 603
            GKYELGR LG G  AKV  A +  TG+S A                QIKREI  +K++KH +IV LHEV+ASK+KI
Sbjct:    9 GKYELGRTLGEGNSAKVKFAIDTLTGESFAIKIIEKSCITRLNVSFQIKREIRTLKVLKHPNIVRLHEVLASKTKI 84          
BLAST of CX291096 vs. ExPASy Swiss-Prot
Match: PP395_ARATH (Pentatricopeptide repeat-containing protein At5g21222 OS=Arabidopsis thaliana GN=ATC401 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.891e-11
Identity = 33/76 (43.42%), Postives = 49/76 (64.47%), Query Frame = 1
Query:  376 GKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKI 603
            GKYE+GR++G   F K+  A + +TG  +A               EQIKREIS+MK++ H ++V+L+EV+ASK+KI
Sbjct:   11 GKYEVGRLIGECNFGKLRSAVDTETGDPVALMILDKDKVLKHKMAEQIKREISIMKLINHPNVVQLYEVLASKAKI 86          
BLAST of CX291096 vs. ExPASy Swiss-Prot
Match: CIPKG_ARATH (CBL-interacting serine/threonine-protein kinase 16 OS=Arabidopsis thaliana GN=CIPK16 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.891e-11
Identity = 36/81 (44.44%), Postives = 50/81 (61.73%), Query Frame = 1
Query:  364 TLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXX-EQIKREISVMKMVKHKHIVELHEVMASKSKI 603
            T+L  KY +GR+LG G FAKVY    + TG  +A                EQI+REI+VM++++H ++VEL EVMA+K KI
Sbjct:    9 TVLFDKYNIGRLLGTGNFAKVYHGTEISTGDDVAIKVIKKDHVFKRRGMMEQIEREIAVMRLLRHPNVVELREVMATKKKI 89          
BLAST of CX291096 vs. ExPASy Swiss-Prot
Match: CIPK4_ARATH (CBL-interacting serine/threonine-protein kinase 4 OS=Arabidopsis thaliana GN=CIPK4 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.891e-11
Identity = 36/81 (44.44%), Postives = 53/81 (65.43%), Query Frame = 1
Query:  364 TLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMV-KHKHIVELHEVMASKSKI 603
            T+L GKYELGR LG G+FAKV++AR++ TG+ +A                +I REI  M+ +  H +++++HEVMA+KSKI
Sbjct:   15 TVLLGKYELGRRLGSGSFAKVHVARSISTGELVAIKIIDKQKTIDSGMEPRIIREIEAMRRLHNHPNVLKIHEVMATKSKI 95          
The following BLAST results are available for this feature:
BLAST of CX291096 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
CIPKH_ARATH2.867e-1150.00CBL-interacting serine/threonine-protein kinase 17... [more]
PP395_ARATH4.891e-1143.42Pentatricopeptide repeat-containing protein At5g21... [more]
CIPKG_ARATH4.891e-1144.44CBL-interacting serine/threonine-protein kinase 16... [more]
CIPK4_ARATH4.891e-1144.44CBL-interacting serine/threonine-protein kinase 4 ... [more]

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Properties
Property NameValue
Genbank descriptionC03004A08SK OF2 Citrus clementina cDNA clone C03004A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291096 ID=CX291096; Name=CX291096; organism=Citrus clementina; type=EST; length=604bp
CCGGTAAACACCATCGATAAGCCTTTGATCAATAGCAGCAAATCAAAATC
CTTCTCGTCTCCCCCCAAGAAAAAATAAATAAGCAAACACTACAAGCCCC
TTCAGGGAATGCAGAGAGATGAGAGGACCTTCGTGGAGATTGCCTGAGCT
GTGTTTACGTGCCCAGCGGTGCGTCGGCGGCCGTAATTGCCACCGGAAAC
ACGTCGAAGACGGGTGATCCTCAACCACCACCACAACACAAAAGAAAACC
TGAAAGAATTATTTAATTAGCTAAACTTGGTACATATATACGTATAAAAG
GAAAAAAAAGACCGCGTGGAGATGGCTACATCAAACAGTAACGGCGGAGG
CGATGACAGGCCGACGTTGCTACATGGGAAATACGAGCTGGGGCGTATGC
TAGGCCACGGAACCTTCGCGAAGGTGTACCTGGCAAGAAATTTGCAGACG
GGGAAAAGCATGGCCATGAAAGTTGTTGGTAAAGACAAGGTTATCAAGGT
GGGCATGATGGAGCAAATCAAGCGTGAAATCTCTGTCATGAAGATGGTGA
AGCACAAGCACATAGTTGAGCTACACGAAGTCATGGCAAGTAAGTCCAAG
ATTT
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