CX291147

Overview
NameCX291147
Unique NameCX291147
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length616
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291147 vs. ExPASy Swiss-Prot
Match: LAC15_ARATH (Laccase-15 OS=Arabidopsis thaliana GN=TT10 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 7.876e-41
Identity = 71/144 (49.31%), Postives = 95/144 (65.97%), Query Frame = 3
Query:  180 HSFQVKNLTIGRLCRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDI 611
            ++F V+ +   +LC  + I  VN   PGP I+V +GDT+ V+V N +  NIT+HWHG+ Q R+ W+DGP  ITQCPIRPG+ + YK     ++ T+WWHAH S  RATVHG   + P+     PFPK D EVPI+LGEWW  D+
Sbjct:   24 YTFTVREVPYTKLCSTKAILTVNSQFPGPIIKVHKGDTIYVNVQNRASENITMHWHGVEQPRNPWSDGPEYITQCPIRPGSDFLYKVIFSIEDTTVWWHAHSSWTRATVHGLIFVYPRPPQILPFPKADHEVPIILGEWWKRDV 167          
BLAST of CX291147 vs. ExPASy Swiss-Prot
Match: LAC6_ARATH (Laccase-6 OS=Arabidopsis thaliana GN=LAC6 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.343e-40
Identity = 73/145 (50.34%), Postives = 97/145 (66.90%), Query Frame = 3
Query:  180 HSFQVKNLTIGRLCRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIM 614
            + F+V+ + + RLC+   I  VN   PGP I  QE D +++ V N +PYN TIHWHGI Q RS W DGP+ ITQCPI+ G S+TY F++  Q+GT  WHAH S LRATV+G  I+ PK+   YPF KP  E  I+LGE+W  +++
Sbjct:   34 YQFKVQTIRLTRLCQTNEIVTVNKKFPGPAISAQEDDRIVIKVINMTPYNTTIHWHGIKQKRSCWYDGPSYITQCPIQSGQSFTYNFKVAQQKGTFLWHAHFSWLRATVYGPLIVYPKASVPYPFKKPFNEHTILLGEYWLKNVV 178          
BLAST of CX291147 vs. ExPASy Swiss-Prot
Match: LAC1_ARATH (Laccase-1 OS=Arabidopsis thaliana GN=LAC1 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 3.909e-40
Identity = 73/142 (51.41%), Postives = 96/142 (67.61%), Query Frame = 3
Query:  186 FQVKNLTIGRLCRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDI 611
            F V+   + RLC  + +  VNG  PGPT+ V EGD + + V+N   +N TIHWHG+ Q R+ WADGP  ITQCPIR   SYTY+F++ +Q GTL WHAH S  RA+V+GAFII P+  + +       E+PI+LGEWWNDD+
Sbjct:   33 FNVEWKKVTRLCHTKQLLTVNGQYPGPTVAVHEGDIVEIKVTNRIAHNTTIHWHGLRQYRTGWADGPAYITQCPIRSKQSYTYRFKVEDQRGTLLWHAHHSWQRASVYGAFIIYPRQPYPFSGSHIQSEIPIILGEWWNDDV 174          
BLAST of CX291147 vs. ExPASy Swiss-Prot
Match: LAC16_ORYSJ (Putative laccase-16 OS=Oryza sativa subsp. japonica GN=LAC16 PE=5 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.539e-31
Identity = 55/91 (60.44%), Postives = 68/91 (74.73%), Query Frame = 3
Query:  339 HWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDI 611
            H HG+ Q R+ W+DGP  ITQCPIRP  ++TY+  +  +EGTLWWHAH    RATVHGA +I PK G  +PF KPDKE+PI+L EWWNDD+
Sbjct:   22 HRHGVDQPRNPWSDGPEFITQCPIRPCGNFTYQVILFEEEGTLWWHAHSDFDRATVHGAIVIHPKHGTTFPFNKPDKEIPIILSEWWNDDV 112          
BLAST of CX291147 vs. ExPASy Swiss-Prot
Match: ASO_CUCSA (L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.719e-25
Identity = 51/133 (38.35%), Postives = 83/133 (62.41%), Query Frame = 3
Query:  219 CRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNE-SPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLR-ATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDI 611
            C +  +  +NG  PGPTIR   GD ++V ++N+     + IHWHGI Q  + WADG   I+QC I PG ++TY+F ++++ GT ++H H+ M R A ++G+ I+ P  G   PF   D+E+ ++L +WW+  +
Sbjct:   54 CVENIVMGINGEFPGPTIRANAGDIVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQCAINPGETFTYRF-VVDKAGTYFYHGHLGMQRSAGLYGSLIVDPPEGRSEPF-HYDEEINLLLSDWWHQSV 184          
BLAST of CX291147 vs. ExPASy Swiss-Prot
Match: ASO_CUCMA (L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 6.058e-25
Identity = 54/133 (40.60%), Postives = 79/133 (59.40%), Query Frame = 3
Query:  219 CRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNE-SPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLR-ATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDI 611
            C +  +  +NG  PGPTIR   GDT++V + N+     + IHWHGI Q  + WADG   I+QC I PG ++ Y F + N  GT ++H H+ M R A ++G+ I+ P  G K PF   D E+ ++L +WW+  I
Sbjct:   49 CNENIVMGINGQFPGPTIRANAGDTVVVELINKLHTEGVVIHWHGILQRGTPWADGTASISQCAINPGETFFYNFTVDN-PGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPF-HYDGEINLLLSDWWHQSI 179          
BLAST of CX291147 vs. ExPASy Swiss-Prot
Match: ASO_CUCPM (L-ascorbate oxidase OS=Cucurbita pepo var. melopepo PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 7.912e-25
Identity = 53/133 (39.85%), Postives = 80/133 (60.15%), Query Frame = 3
Query:  219 CRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNE-SPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLR-ATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDI 611
            C +  +  +NG  PGPTIR   GD+++V ++N+     + IHWHGI Q  + WADG   I+QC I PG ++ Y F + N  GT ++H H+ M R A ++G+ I+ P  G K PF   D E+ ++L +WW+  I
Sbjct:   19 CNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQCAINPGETFFYNFTVDN-PGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPF-HYDGEINLLLSDWWHQSI 149          
BLAST of CX291147 vs. ExPASy Swiss-Prot
Match: ASO_TOBAC (L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 8.748e-24
Identity = 52/128 (40.62%), Postives = 80/128 (62.50%), Query Frame = 3
Query:  225 QQTITAVNGSLPGPTIRVQEGDTLIVHVSNE-SPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLR-ATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWN 602
            +  +  +NG  PGPTIR + GDT+ VH++N+     + IHWHGI QI + WADG   I+QC I PG ++ Y+F+ +++ GT ++H H  M R A ++G+ I+    G K PF   D E  ++L +WW+
Sbjct:   48 ESVVMGINGQFPGPTIRAKAGDTVAVHLTNKLHTEGVVIHWHGIRQIGTPWADGTAAISQCAINPGETFLYRFK-VDKAGTYFYHGHYGMQRSAGLYGSLIVEVGEGEKEPF-HYDGEFNLLLSDWWH 173          
BLAST of CX291147 vs. ExPASy Swiss-Prot
Match: LAC4_THACU (Laccase-4 OS=Thanatephorus cucumeris GN=LCC4 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.111e-21
Identity = 53/148 (35.81%), Postives = 81/148 (54.73%), Query Frame = 3
Query:  180 HSFQVKNLTIGRLCRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESP-----YNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHI-SMLRATVHGAFII-RPKSGHKYPFPKPDKEVPIVLGEWWN 602
            + F +KN+ +     Q+ I +VNG +PG  I   +GDTL ++V+N+          TIHWHG+FQ  +   DGP  +TQCPI    SYTY+  +  Q GT+W+HAH+ S     + G  +I  P   HK  +   D    ++L +W++
Sbjct:   25 YKFDIKNVNVAPDGFQRPIVSVNGLVPGTLITANKGDTLRINVTNQLTDPSMRRATTIHWHGLFQATTADEDGPAFVTQCPIAQNLSYTYEIPLHGQTGTMWYHAHLASQYVDGLRGPLVIYDPNDPHKSRYDVDDASTVVMLEDWYH 172          
BLAST of CX291147 vs. ExPASy Swiss-Prot
Match: LAC1_THACU (Laccase-1 OS=Thanatephorus cucumeris GN=LCC1 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.111e-21
Identity = 52/134 (38.81%), Postives = 78/134 (58.21%), Query Frame = 3
Query:  225 QQTITAVNGSLPGPTIRVQEGDTLIVHVSNE----SPYNIT-IHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRAT-VHGAFII-RPKSGHKYPFPKPDKEVPIVLGEWWND 605
            ++  T VNG  PGP I   +GDTL V V N+      Y  T IHWHG+ Q R+   DGP+ +TQCPI P  SYTY   + +Q GT W+H+H+S      + G  +I  PK  H+  +   D++  +++G+W+++
Sbjct:   39 KRNATLVNGGYPGPLIFANKGDTLKVKVQNKLTNPEMYRTTSIHWHGLLQHRNADDDGPSFVTQCPIVPRESYTYTIPLDDQTGTYWYHSHLSSQYVDGLRGPLVIYDPKDPHRRLYDVDDEKTVLIIGDWYHE 172          
The following BLAST results are available for this feature:
BLAST of CX291147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
LAC15_ARATH7.876e-4149.31Laccase-15 OS=Arabidopsis thaliana GN=TT10 PE=1 SV... [more]
LAC6_ARATH1.343e-4050.34Laccase-6 OS=Arabidopsis thaliana GN=LAC6 PE=2 SV=... [more]
LAC1_ARATH3.909e-4051.41Laccase-1 OS=Arabidopsis thaliana GN=LAC1 PE=2 SV=... [more]
LAC16_ORYSJ2.539e-3160.44Putative laccase-16 OS=Oryza sativa subsp. japonic... [more]
ASO_CUCSA2.719e-2538.35L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1[more]
ASO_CUCMA6.058e-2540.60L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=... [more]
ASO_CUCPM7.912e-2539.85L-ascorbate oxidase OS=Cucurbita pepo var. melopep... [more]
ASO_TOBAC8.748e-2440.63L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE... [more]
LAC4_THACU3.111e-2135.81Laccase-4 OS=Thanatephorus cucumeris GN=LCC4 PE=1 ... [more]
LAC1_THACU3.111e-2138.81Laccase-1 OS=Thanatephorus cucumeris GN=LCC1 PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionC03004F05SK OF2 Citrus clementina cDNA clone C03004F05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291147 ID=CX291147; Name=CX291147; organism=Citrus clementina; type=EST; length=616bp
CACGAGCTAATTTCTTCATTTGCATAAGATTTCTTTACATTCCTCATATT
TTTTGGAGCTTTCTTTAAGCCAACATTAATTCTCTTCAGACTTCTAACAT
GGCGCGTTCCATGCTTTTGCTAGCATGCGCTTTAGTTGTTTTAGCTTCTT
CTACCTTGTCTTCAGCAGCAGTCGTGGAACACTCATTCCAAGTGAAAAAC
TTGACGATTGGGCGGCTGTGCCGACAGCAAACGATAACGGCGGTTAACGG
GAGCCTCCCTGGTCCGACGATACGCGTTCAAGAGGGTGACACTCTGATTG
TTCATGTCTCCAACGAGTCGCCTTATAACATCACTATTCACTGGCATGGA
ATATTTCAGATTCGAAGCATCTGGGCAGATGGACCAAACATGATAACTCA
GTGTCCAATAAGACCTGGAAATAGCTACACTTACAAATTTAGAATCATCA
ATCAAGAAGGAACCCTTTGGTGGCATGCTCACATCTCAATGCTGCGAGCC
ACCGTCCACGGTGCTTTTATCATCCGCCCTAAGTCTGGTCACAAGTATCC
ATTTCCTAAACCCGATAAAGAAGTTCCCATTGTTCTCGGAGAGTGGTGGA
ATGACGATATCATGGA
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