CX291203

Overview
NameCX291203
Unique NameCX291203
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length310
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291203 vs. ExPASy Swiss-Prot
Match: PER49_ARATH (Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 2.387e-17
Identity = 44/103 (42.72%), Postives = 60/103 (58.25%), Query Frame = 1
Query:    1 HDCAVQSCDASLLLDSTRKTLSEKEMD-RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDS 306
            HDC VQ CD SLLLDS+ +  +EK  +  S   R F  ++ IK  +E++CPG VSCAD+L L+ RD  V  GGP   +  GRRD R +        +P  N++
Sbjct:   70 HDCFVQGCDGSLLLDSSGRVATEKNSNPNSKSARGFDVVDQIKAELEKQCPGTVSCADVLTLAARDSSVLTGGPSWVVPLGRRDSRSASLSQSNNNIPAPNNT 172          
BLAST of CX291203 vs. ExPASy Swiss-Prot
Match: PER67_ARATH (Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.072e-17
Identity = 45/84 (53.57%), Postives = 53/84 (63.10%), Query Frame = 1
Query:    1 HDCAVQSCDASLLLDSTRKTLSEKEMDRSFG-MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRD 249
            HDC V  CD SLLLD T   L EK    S   +R F  I+ IK  VE+ CPG+VSCADIL ++ RD V+ LGGP   +K GRRD
Sbjct:   61 HDCFVNGCDGSLLLDDTPSFLGEKTSGPSNNSVRGFEVIDKIKFKVEKMCPGIVSCADILAITARDSVLLLGGPGWSVKLGRRD 144          
BLAST of CX291203 vs. ExPASy Swiss-Prot
Match: PER57_ARATH (Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.072e-17
Identity = 45/87 (51.72%), Postives = 54/87 (62.07%), Query Frame = 1
Query:    1 HDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKS 261
            HDC V+ CDASLL+DST    SEK    +  +R F  I+ IK  +E  CP  VSCADI+ L+ RD V   GGP   + TGRRDGR S
Sbjct:   64 HDCFVKGCDASLLIDSTN---SEKTAGPNGSVREFDLIDRIKAQLEAACPSTVSCADIVTLATRDSVALAGGPSYSIPTGRRDGRVS 147          
BLAST of CX291203 vs. ExPASy Swiss-Prot
Match: PER4_VITVI (Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.072e-17
Identity = 45/104 (43.27%), Postives = 58/104 (55.77%), Query Frame = 1
Query:    1 HDCAVQSCDASLLLDSTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSM 309
            HDC V  CDAS+LLD T     E+  +     +R    I+NIK  VE  CPGVVSCADI+ ++ RD VV LGGP   +K GRRD + +        +P    S+
Sbjct:   67 HDCFVNGCDASVLLDDTSSFTGEQTAVPNKNSIRGLNVIDNIKSQVESVCPGVVSCADIIAIAARDSVVILGGPDWDVKLGRRDSKTASLSGANNNIPPPTSSL 170          
BLAST of CX291203 vs. ExPASy Swiss-Prot
Match: PER30_ARATH (Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.072e-17
Identity = 42/87 (48.28%), Postives = 58/87 (66.67%), Query Frame = 1
Query:    1 HDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKS 261
            HDC V+ CD S+L++ST    +E++   +  +R F ++E IK  +E+ CP  VSCADI+ L+ RD VVA GGP   + TGRRDGR S
Sbjct:   69 HDCFVRGCDGSVLINSTSGN-AERDAPPNLTLRGFGFVERIKALLEKVCPKTVSCADIIALTARDAVVATGGPSWSVPTGRRDGRIS 154          
BLAST of CX291203 vs. ExPASy Swiss-Prot
Match: PER27_ARATH (Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.072e-17
Identity = 48/103 (46.60%), Postives = 63/103 (61.17%), Query Frame = 1
Query:    1 HDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSM 309
            HDC V+ CD S+LLD       EK    +  +R F  I++ K A+E+ CPG+VSC+DIL L  RD +VAL GP   ++TGRRDGR S   I E  LP   D++
Sbjct:   66 HDCFVRGCDGSVLLDKPNNQ-GEKSAVPNLSLRGFGIIDDSKAALEKVCPGIVSCSDILALVARDAMVALEGPSWEVETGRRDGRVS--NINEVNLPSPFDNI 165          
BLAST of CX291203 vs. ExPASy Swiss-Prot
Match: PER68_ARATH (Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 6.946e-17
Identity = 44/84 (52.38%), Postives = 54/84 (64.29%), Query Frame = 1
Query:    1 HDCAVQSCDASLLLDSTRKTLSEKEMD-RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRD 249
            HDC V  CDAS+LLD TR  L EK     +  +R +  I+ IK  VER CPGVVSCADIL ++ RD V+ +GG    +K GRRD
Sbjct:   70 HDCFVNGCDASILLDDTRSFLGEKTAGPNNNSVRGYEVIDAIKSRVERLCPGVVSCADILAITARDSVLLMGGRGWSVKLGRRD 153          
BLAST of CX291203 vs. ExPASy Swiss-Prot
Match: PER2_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 6.946e-17
Identity = 48/100 (48.00%), Postives = 58/100 (58.00%), Query Frame = 1
Query:    1 HDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHN 300
            HDC VQ CDASLLL       SE+    + G+  +  I+  K AVER CPGVVSCADIL ++ RD  VA+GGP   ++ GRRD   S A      LP  N
Sbjct:   72 HDCFVQGCDASLLLSGAG---SERASPANDGVLGYEVIDAAKAAVERVCPGVVSCADILAVAARDASVAVGGPSWTVRLGRRDSTTSNAAQAATDLPRGN 168          
BLAST of CX291203 vs. ExPASy Swiss-Prot
Match: PER1_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 6.946e-17
Identity = 48/100 (48.00%), Postives = 58/100 (58.00%), Query Frame = 1
Query:    1 HDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHN 300
            HDC VQ CDASLLL       SE+    + G+  +  I+  K AVER CPGVVSCADIL ++ RD  VA+GGP   ++ GRRD   S A      LP  N
Sbjct:   72 HDCFVQGCDASLLLSGAG---SERASPANDGVLGYEVIDAAKAAVERVCPGVVSCADILAVAARDASVAVGGPSWTVRLGRRDSTTSNAAQAATDLPRGN 168          
BLAST of CX291203 vs. ExPASy Swiss-Prot
Match: PER40_ARATH (Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 9.071e-17
Identity = 43/104 (41.35%), Postives = 59/104 (56.73%), Query Frame = 1
Query:    1 HDCAVQSCDASLLLDSTRKTLSEKEMDRSFG-MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSM 309
            HDC V  CDAS+LLD T   + EK    +   +R F  I++IK  +E  CP  VSCADIL ++ RD VV  GGP   ++ GR+D R +  +     LP  N ++
Sbjct:   90 HDCFVNGCDASVLLDDTEGLVGEKTAPPNLNSLRGFEVIDSIKSDIESVCPETVSCADILAMAARDSVVVSGGPRWEVEVGRKDSRTASKQAATNGLPSPNSTV 193          
The following BLAST results are available for this feature:
BLAST of CX291203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
PER49_ARATH2.387e-1742.72Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=... [more]
PER67_ARATH4.072e-1753.57Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=... [more]
PER57_ARATH4.072e-1751.72Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=... [more]
PER4_VITVI4.072e-1743.27Peroxidase 4 OS=Vitis vinifera GN=GSVIVT0002396700... [more]
PER30_ARATH4.072e-1748.28Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=... [more]
PER27_ARATH4.072e-1746.60Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=... [more]
PER68_ARATH6.946e-1752.38Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=... [more]
PER2_ZINEL6.946e-1748.00Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV... [more]
PER1_ZINEL6.946e-1748.00Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV... [more]
PER40_ARATH9.071e-1741.35Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC03005C08SK OF2 Citrus clementina cDNA clone C03005C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291203 ID=CX291203; Name=CX291203; organism=Citrus clementina; type=EST; length=310bp
CATGACTGTGCTGTCCAGTCTTGTGATGCTTCACTGCTTCTGGACTCGAC
AAGAAAGACCTTGTCTGAGAAGGAGATGGACAGGAGCTTTGGTATGAGGA
ACTTCAGGTACATTGAGAACATCAAAGAAGCTGTTGAAAGAGAGTGCCCT
GGTGTTGTTTCCTGTGCTGATATCCTTGTCCTGTCCGGTAGAGATGGCGT
TGTTGCGCTTGGAGGCCCTTACATTCCTCTCAAGACAGGAAGAAGAGATG
GTAGAAAAAGCAGAGCAGAGATACTTGAGCAGTATCTCCCAGATCACAAT
GACAGCATGT
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