CX291203

Overview
NameCX291203
Unique NameCX291203
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length310
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291203 vs. ExPASy Swiss-Prot
Match: PER7_ARATH (Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.502e-16
Identity = 44/94 (46.81%), Postives = 56/94 (59.57%), Query Frame = 1
Query:    1 HDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQ 282
            HDC V  CDAS+LLD      +E+    S  +R F  I++IK  +E+ CPG VSCADIL  + R   V LGGPY P   GRRD + S A  +E+
Sbjct:   91 HDCGVTGCDASVLLDYEG---TERRSPASKTLRGFELIDDIKSEMEKSCPGKVSCADILTSASRAATVQLGGPYWPNVYGRRDSKHSYARDVEK 181          
BLAST of CX291203 vs. ExPASy Swiss-Prot
Match: PER36_ARATH (Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 4.502e-16
Identity = 43/88 (48.86%), Postives = 54/88 (61.36%), Query Frame = 1
Query:    1 HDCAVQSCDASLLLDSTRKTLSEKEMDRSF-GMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKS 261
            HDC V  CDAS+LLDS+    SEK  + +    R F  I+ IK A+E ECP  VSCAD+L L  RD +V  GGP   +  GRRD R++
Sbjct:   81 HDCFVNGCDASVLLDSSGTMESEKRSNANRDSARGFEVIDEIKSALENECPETVSCADLLALVARDSIVICGGPSWEVYLGRRDAREA 168          
BLAST of CX291203 vs. ExPASy Swiss-Prot
Match: PER42_MAIZE (Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 5.880e-16
Identity = 43/87 (49.43%), Postives = 55/87 (63.22%), Query Frame = 1
Query:    1 HDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKS 261
            HDC +Q CDAS+LL+ T    ++   + +   R F  + +IK  VE  CPGVVSCADIL ++ RDGVVALGGP   +  GRRD   S
Sbjct:   71 HDCFIQGCDASILLNDTSGEQTQPP-NLTLNPRAFDVVNSIKAQVEAACPGVVSCADILAVAARDGVVALGGPSWTVLLGRRDSTGS 156          
BLAST of CX291203 vs. ExPASy Swiss-Prot
Match: PER65_ARATH (Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 7.679e-16
Identity = 43/105 (40.95%), Postives = 64/105 (60.95%), Query Frame = 1
Query:    1 HDCAVQSCDASLLL--DSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSM 309
            HDC ++ CDAS+L+  +S  K   + +++ S     F  +  IK A+E  CPGVVSCADIL  + RD V  +GGPY  +K GR+DG +S+A  +   +P  N ++
Sbjct:   73 HDCFLEGCDASVLIATNSFNKAERDDDLNDSLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPYFDVKLGRKDGFESKAHKVRGNVPMANQTV 177          
BLAST of CX291203 vs. ExPASy Swiss-Prot
Match: PER15_ARATH (Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.679e-16
Identity = 43/103 (41.75%), Postives = 57/103 (55.34%), Query Frame = 1
Query:    1 HDCAVQSCDASLLLDSTRKTLSEKEMD-RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDS 306
            HDC VQ CD SLLLD++   ++EK  +  S   R F  ++ IK A+E ECP  VSCAD L L+ RD  V  GGP   +  GRRD   +        +P  N++
Sbjct:   76 HDCFVQGCDGSLLLDTSGSIVTEKNSNPNSRSARGFEVVDEIKAALENECPNTVSCADALTLAARDSSVLTGGPSWMVPLGRRDSTSASLSGSNNNIPAPNNT 178          
BLAST of CX291203 vs. ExPASy Swiss-Prot
Match: PERN_ARMRU (Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.003e-15
Identity = 45/85 (52.94%), Postives = 52/85 (61.18%), Query Frame = 1
Query:    1 HDCAVQSCDASLLLDSTRKTLSEK-EMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDG 252
            HDC V  CDAS+LLD T    SEK  +     +R F  I+ IK AVE  CPGVVSCADIL L+ RD V   GGP   +  GR+DG
Sbjct:   70 HDCFVNGCDASVLLDGTN---SEKLAIPNVNSVRGFEVIDTIKAAVENACPGVVSCADILTLAARDSVYLSGGPQWRVALGRKDG 151          
BLAST of CX291203 vs. ExPASy Swiss-Prot
Match: PER14_ARATH (Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.003e-15
Identity = 43/99 (43.43%), Postives = 56/99 (56.57%), Query Frame = 1
Query:    1 HDCAVQSCDASLLLDSTRKTLSEKEMD-RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPD 294
            HDC VQ CD SLLLD++   ++EK  +  S   R F  ++ IK A+E ECP  VSCAD L L+ RD  V  GGP   +  GRRD   +      + LP+
Sbjct:   75 HDCFVQGCDGSLLLDTSGSIVTEKNSNPNSRSARGFEVVDEIKAALENECPNTVSCADALTLAARDSSVLTGGPSWTVPLGRRDSATASRAKPNKDLPE 173          
BLAST of CX291203 vs. ExPASy Swiss-Prot
Match: PER44_ARATH (Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.310e-15
Identity = 40/87 (45.98%), Postives = 51/87 (58.62%), Query Frame = 1
Query:    1 HDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKS 261
            HDC V+ CDASLL+D      SEK    +  +R +  I+  K  +E  CP  VSCADI+ L+ RD V   GGP   + TGRRDG +S
Sbjct:   62 HDCFVRGCDASLLIDPRPGRPSEKSTGPNASVRGYEIIDEAKRQLEAACPRTVSCADIVTLATRDSVALAGGPRFSVPTGRRDGLRS 148          
BLAST of CX291203 vs. ExPASy Swiss-Prot
Match: PER59_ARATH (Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 2.234e-15
Identity = 46/85 (54.12%), Postives = 51/85 (60.00%), Query Frame = 1
Query:    1 HDCAVQSCDASLLLDSTRKTLSEK-EMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDG 252
            HDC V  CDASLLLD      SEK  +      R F  I+ IK AVE  CPGVVSCADIL L+ RD VV  GGP   +  GR+DG
Sbjct:   70 HDCFVNGCDASLLLDGAD---SEKLAIPNINSARGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVALGRKDG 151          
BLAST of CX291203 vs. ExPASy Swiss-Prot
Match: PER1C_ARMRU (Peroxidase C1C (Fragment) OS=Armoracia rusticana GN=PRXC1C PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.234e-15
Identity = 41/98 (41.84%), Postives = 57/98 (58.16%), Query Frame = 1
Query:    1 HDCAVQSCDASLLLDSTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLP 291
            HDC V  CDAS+LLD+T    +EK+    +   R F  ++ IK AVER CP  VSCAD+L ++ +  V   GGP   +  GRRD R++  ++    LP
Sbjct:   51 HDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSRQAFLDLANANLP 148          
The following BLAST results are available for this feature:
BLAST of CX291203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
PER7_ARATH4.502e-1646.81Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 ... [more]
PER36_ARATH4.502e-1648.86Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=... [more]
PER42_MAIZE5.880e-1649.43Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1[more]
PER65_ARATH7.679e-1640.95Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=... [more]
PER15_ARATH7.679e-1641.75Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=... [more]
PERN_ARMRU1.003e-1552.94Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 S... [more]
PER14_ARATH1.003e-1543.43Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=... [more]
PER44_ARATH1.310e-1545.98Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=... [more]
PER59_ARATH2.234e-1554.12Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=... [more]
PER1C_ARMRU2.234e-1541.84Peroxidase C1C (Fragment) OS=Armoracia rusticana G... [more]

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Properties
Property NameValue
Genbank descriptionC03005C08SK OF2 Citrus clementina cDNA clone C03005C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291203 ID=CX291203; Name=CX291203; organism=Citrus clementina; type=EST; length=310bp
CATGACTGTGCTGTCCAGTCTTGTGATGCTTCACTGCTTCTGGACTCGAC
AAGAAAGACCTTGTCTGAGAAGGAGATGGACAGGAGCTTTGGTATGAGGA
ACTTCAGGTACATTGAGAACATCAAAGAAGCTGTTGAAAGAGAGTGCCCT
GGTGTTGTTTCCTGTGCTGATATCCTTGTCCTGTCCGGTAGAGATGGCGT
TGTTGCGCTTGGAGGCCCTTACATTCCTCTCAAGACAGGAAGAAGAGATG
GTAGAAAAAGCAGAGCAGAGATACTTGAGCAGTATCTCCCAGATCACAAT
GACAGCATGT
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