CX291203

Overview
NameCX291203
Unique NameCX291203
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length310
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291203 vs. ExPASy Swiss-Prot
Match: PER19_ARATH (Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.109e-14
Identity = 41/107 (38.32%), Postives = 64/107 (59.81%), Query Frame = 1
Query:    1 HDCAVQSCDASLLLDSTR--KTLSEKEMDRSFGMRN--FRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSM 309
            HDC V+ CD S+L+++ +  K L+E+E   +  +R   F  I   K  VE  CP +VSC+DIL ++ RD +   GGPY  +K GR DG++S A+ +   +P  N ++
Sbjct:   82 HDCFVEGCDGSILIETKKGSKKLAEREAYENKELREEGFDSIIKAKALVESHCPSLVSCSDILAIAARDFIHLAGGPYYQVKKGRWDGKRSTAKNVPPNIPRSNSTV 188          
BLAST of CX291203 vs. ExPASy Swiss-Prot
Match: PER10_ARATH (Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.109e-14
Identity = 40/98 (40.82%), Postives = 54/98 (55.10%), Query Frame = 1
Query:    1 HDCAVQSCDASLLLDSTRKTLSEKEMDRSFG-MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLP 291
            HDC V  CD S+LL+ +     EK    +   +R F  IE+IK  +E  CP  VSCADI+ L+ R+ VV  GGP+ P+  GRRD   +  +     LP
Sbjct:   88 HDCFVNGCDGSILLNDSEDFKGEKNAQPNRNSVRGFEVIEDIKSDIESSCPLTVSCADIVALAAREAVVLTGGPFWPVPLGRRDSLTASEQAANTNLP 185          
BLAST of CX291203 vs. ExPASy Swiss-Prot
Match: PERN1_TOBAC (Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.448e-14
Identity = 42/89 (47.19%), Postives = 55/89 (61.80%), Query Frame = 1
Query:    1 HDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRA 267
            HDC V  CD S+L++ +    +E+    +  ++ F  IE+ K  +E  CPGVVSCADIL L+ RD VVA  G    + TGRRDGR SRA
Sbjct:   72 HDCFVLGCDGSILIEGSD---AERTAIPNRNLKGFDVIEDAKTQIEAICPGVVSCADILALAARDSVVATRGLTWSVPTGRRDGRVSRA 157          
BLAST of CX291203 vs. ExPASy Swiss-Prot
Match: PER61_ARATH (Probable peroxidase 61 OS=Arabidopsis thaliana GN=PER61 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.448e-14
Identity = 41/92 (44.57%), Postives = 54/92 (58.70%), Query Frame = 1
Query:    4 DCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILE 279
            DC V  CD S+LL       SE+   ++ G+  F  I+ IK+ +E  CPGVVSCADIL L+ RD V   G P  P+ TGRRDG    A+ ++
Sbjct:   78 DCMVNGCDGSILLQGPN---SERTAPQNRGLGGFVIIDKIKQVLESRCPGVVSCADILNLATRDAVHMAGAPSYPVFTGRRDGGTLNADAVD 166          
BLAST of CX291203 vs. ExPASy Swiss-Prot
Match: PER5_VITVI (Peroxidase 5 OS=Vitis vinifera GN=GSVIVT00037159001 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.891e-14
Identity = 42/98 (42.86%), Postives = 55/98 (56.12%), Query Frame = 1
Query:    1 HDCAVQSCDASLLLDSTRKTLSEKEMDRSF-GMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLP 291
            HDC V+ CD S+L+DST    +EK+   +   +R F  I++ K  +E  C GVVSCADI+  + RD V   GG    +  GRRDGR S A      LP
Sbjct:  101 HDCFVRGCDGSVLIDSTPSNTAEKDSPANNPSLRGFEVIDSAKARLEAVCKGVVSCADIVAFAARDSVEITGGLGYDVPAGRRDGRISLASEASTNLP 198          
BLAST of CX291203 vs. ExPASy Swiss-Prot
Match: PER3_ARMRU (Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.891e-14
Identity = 38/98 (38.78%), Postives = 60/98 (61.22%), Query Frame = 1
Query:    1 HDCAVQSCDASLLLDSTRKTLSEKEM-DRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLP 291
            HDC V+ CDAS+LLD++    +EK+    +   R F  I+ +K ++ER CP  VSCAD+L ++ +  V+  GGP+ P+  GRRD  ++  ++    LP
Sbjct:   71 HDCFVRGCDASILLDNSTSFRTEKDAAPNANSARGFGVIDRMKTSLERACPRTVSCADVLTIASQISVLLSGGPWWPVPLGRRDSVEAFFDLANTALP 168          
BLAST of CX291203 vs. ExPASy Swiss-Prot
Match: PERA2_ARMRU (Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.470e-14
Identity = 40/84 (47.62%), Postives = 49/84 (58.33%), Query Frame = 1
Query:    1 HDCAVQSCDASLLLDSTRKTLSEKEMD-RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRD 249
            HDC V  CDAS+LLD +    SEK     +   R F  ++NIK A+E  CPGVVSC+DIL L+    V   GGP   +  GRRD
Sbjct:   42 HDCFVDGCDASILLDDSGSIQSEKNAGPNANSARGFNVVDNIKTALENTCPGVVSCSDILALASEASVSLTGGPSWTVLLGRRD 125          
BLAST of CX291203 vs. ExPASy Swiss-Prot
Match: PER6_ARATH (Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.470e-14
Identity = 45/105 (42.86%), Postives = 61/105 (58.10%), Query Frame = 1
Query:    1 HDCAVQSCDASLLLDSTRKTLSEKEMD--RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSM 309
            HDC V  CDAS+L+ ST +  SE++ D  RS     F  I  IK AVE +CP +VSC+DILV + R  +  +GGP + +K GR+D   S    +E  L   N +M
Sbjct:   62 HDCMVDGCDASILVASTPRKTSERDADINRSLPGDAFDVITRIKTAVELKCPNIVSCSDILVGATRSLISMVGGPRVNVKFGRKDSLVSDMNRVEGKLARPNMTM 166          
BLAST of CX291203 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.226e-14
Identity = 37/99 (37.37%), Postives = 57/99 (57.58%), Query Frame = 1
Query:    1 HDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRN--FRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLP 291
            HDC    CDAS+L+ ST    +E++   +  +    F  +   K A+E  CP  VSC+DI+ ++ RD +V +GGPY  +  GRRD R S++ ++   LP
Sbjct:   72 HDCFPNGCDASVLVSSTAFNTAERDSSINLSLPGDGFDVVIRAKTALELACPNTVSCSDIIAVAVRDLLVTVGGPYYEISLGRRDSRTSKSSLVSDLLP 170          
BLAST of CX291203 vs. ExPASy Swiss-Prot
Match: PER16_ARATH (Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 3.226e-14
Identity = 46/101 (45.54%), Postives = 60/101 (59.41%), Query Frame = 1
Query:    1 HDCAVQSCDASLLLDSTRKTLSEKEM--DRSFGMRNFRYIENIKEAVERE--CPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLP 291
            HDC V+ CDAS+LL S     SEK+   D+S     F  +   K+A++R+  C   VSCADIL L+ RD VV  GGP  P++ GRRDGR S    ++  LP
Sbjct:   65 HDCFVRGCDASILLASP----SEKDHPDDKSLAGDGFDTVAKAKQALDRDPNCRNKVSCADILALATRDVVVLTGGPNYPVELGRRDGRLSTVASVQHSLP 161          
The following BLAST results are available for this feature:
BLAST of CX291203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
PER19_ARATH1.109e-1438.32Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=... [more]
PER10_ARATH1.109e-1440.82Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=... [more]
PERN1_TOBAC1.448e-1447.19Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 S... [more]
PER61_ARATH1.448e-1444.57Probable peroxidase 61 OS=Arabidopsis thaliana GN=... [more]
PER5_VITVI1.891e-1442.86Peroxidase 5 OS=Vitis vinifera GN=GSVIVT0003715900... [more]
PER3_ARMRU1.891e-1438.78Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3... [more]
PERA2_ARMRU2.470e-1447.62Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1... [more]
PER6_ARATH2.470e-1442.86Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 ... [more]
PER63_ARATH3.226e-1437.37Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PER16_ARATH3.226e-1445.54Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC03005C08SK OF2 Citrus clementina cDNA clone C03005C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291203 ID=CX291203; Name=CX291203; organism=Citrus clementina; type=EST; length=310bp
CATGACTGTGCTGTCCAGTCTTGTGATGCTTCACTGCTTCTGGACTCGAC
AAGAAAGACCTTGTCTGAGAAGGAGATGGACAGGAGCTTTGGTATGAGGA
ACTTCAGGTACATTGAGAACATCAAAGAAGCTGTTGAAAGAGAGTGCCCT
GGTGTTGTTTCCTGTGCTGATATCCTTGTCCTGTCCGGTAGAGATGGCGT
TGTTGCGCTTGGAGGCCCTTACATTCCTCTCAAGACAGGAAGAAGAGATG
GTAGAAAAAGCAGAGCAGAGATACTTGAGCAGTATCTCCCAGATCACAAT
GACAGCATGT
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