CX291205

Overview
NameCX291205
Unique NameCX291205
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length363
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291205 vs. ExPASy Swiss-Prot
Match: CADH_EUCGL (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus globulus GN=CAD PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.177e-20
Identity = 50/120 (41.67%), Postives = 72/120 (60.00%), Query Frame = 2
Query:    2 LGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXXPEKPLKVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVK 361
            LGADA+LVSSD   +K A  ++DYI DT+  VH L P                   PL+     ++  R+ + GS IG MKET+EML+FC +  + + IE+++MD +NTA+ERL K+DV+
Sbjct:  224 LGADAYLVSSDENGMKEATDSLDYIFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERLEKNDVR 343          
BLAST of CX291205 vs. ExPASy Swiss-Prot
Match: CADH_EUCBO (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus botryoides GN=CAD1 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.177e-20
Identity = 50/120 (41.67%), Postives = 72/120 (60.00%), Query Frame = 2
Query:    2 LGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXXPEKPLKVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVK 361
            LGADA+LVSSD   +K A  ++DYI DT+  VH L P                   PL+     ++  R+ + GS IG MKET+EML+FC +  + + IE+++MD +NTA+ERL K+DV+
Sbjct:  223 LGADAYLVSSDENGMKEATDSLDYIFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERLEKNDVR 342          
BLAST of CX291205 vs. ExPASy Swiss-Prot
Match: CADH2_EUCGU (Probable cinnamyl alcohol dehydrogenase 2 OS=Eucalyptus gunnii GN=CAD2 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.177e-20
Identity = 50/120 (41.67%), Postives = 72/120 (60.00%), Query Frame = 2
Query:    2 LGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXXPEKPLKVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVK 361
            LGADA+LVSSD   +K A  ++DYI DT+  VH L P                   PL+     ++  R+ + GS IG MKET+EML+FC +  + + IE+++MD +NTA+ERL K+DV+
Sbjct:  224 LGADAYLVSSDENGMKEATDSLDYIFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERLEKNDVR 343          
BLAST of CX291205 vs. ExPASy Swiss-Prot
Match: CADH_POPDE (Probable cinnamyl alcohol dehydrogenase OS=Populus deltoides PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 6.762e-20
Identity = 52/120 (43.33%), Postives = 71/120 (59.17%), Query Frame = 2
Query:    2 LGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXXPEKPLKVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVK 361
            LGAD +LVSSD   ++ A   +DYIIDTV  VH L P                   PL+     ++  R+ + GS IG MKET+EML+FC +  +A+ IE+++MD INTA ERL K+DV+
Sbjct:  224 LGADEYLVSSDVESMQKAADQLDYIIDTVPVVHPLEPYLSLLKLDGKLILMGVINAPLQFVTPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGVASMIEVIKMDYINTAFERLEKNDVR 343          
BLAST of CX291205 vs. ExPASy Swiss-Prot
Match: ADHC_MYCTU (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium tuberculosis GN=adhC PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.762e-20
Identity = 51/120 (42.50%), Postives = 68/120 (56.67%), Query Frame = 2
Query:    2 LGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXXPEKPLKVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVK 361
            LGA ++  ++DP   +   G  D I++TVSA   L                  PE P+ VP FAL   RR + GSNIGG+ ETQEML+FCA+H +  +IEL+  D IN A ER+  SDV+
Sbjct:  217 LGAKSYYATADPDTFRKLRGGFDLILNTVSANLDLGQYLNLLDVDGTLVELGIPEHPMAVPAFALALMRRSLAGSNIGGIAETQEMLNFCAEHGVTPEIELIEPDYINDAYERVLASDVR 336          
BLAST of CX291205 vs. ExPASy Swiss-Prot
Match: ADHC_MYCBO (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium bovis GN=adhC PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.762e-20
Identity = 51/120 (42.50%), Postives = 68/120 (56.67%), Query Frame = 2
Query:    2 LGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXXPEKPLKVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVK 361
            LGA ++  ++DP   +   G  D I++TVSA   L                  PE P+ VP FAL   RR + GSNIGG+ ETQEML+FCA+H +  +IEL+  D IN A ER+  SDV+
Sbjct:  217 LGAKSYYATADPDTFRKLRGGFDLILNTVSANLDLGQYLNLLDVDGTLVELGIPEHPMAVPAFALALMRRSLAGSNIGGIAETQEMLNFCAEHGVTPEIELIEPDYINDAYERVLASDVR 336          
BLAST of CX291205 vs. ExPASy Swiss-Prot
Match: CADH1_OCIBA (Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilicum GN=CAD1 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.967e-19
Identity = 51/120 (42.50%), Postives = 72/120 (60.00%), Query Frame = 2
Query:    2 LGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXXPEKPLKVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVK 361
            LGAD +LVSSD A+++ A  ++DYIIDTV   H L P                   PL+     ++  R+ + GS IG MKE  EML+FC + ++++ IE+V+MD INTA ERL K+DV+
Sbjct:  224 LGADDYLVSSDAARMQEAADSLDYIIDTVPVFHPLEPYLSLLKIDGKLILMGVVNTPLQFVSPMVMLGRKSITGSFIGSMKELAEMLEFCKEKDLSSTIEIVKMDYINTAFERLEKNDVR 343          
BLAST of CX291205 vs. ExPASy Swiss-Prot
Match: CADH5_ARATH (Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis thaliana GN=CAD5 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.356e-19
Identity = 48/120 (40.00%), Postives = 72/120 (60.00%), Query Frame = 2
Query:    2 LGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXXPEKPLKVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVK 361
            LGAD +++ SD AK+     ++DY+IDTV   H+L P                   PL+     L+  R+++ GS IG MKET+EML+FC +  +++ IE+V+MD +NTA ERL K+DV+
Sbjct:  224 LGADDYVIGSDQAKMSELADSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPLLMLGRKVITGSFIGSMKETEEMLEFCKEKGLSSIIEVVKMDYVNTAFERLEKNDVR 343          
BLAST of CX291205 vs. ExPASy Swiss-Prot
Match: CADH2_TOBAC (Probable cinnamyl alcohol dehydrogenase 2 OS=Nicotiana tabacum GN=CAD19 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.476e-19
Identity = 52/119 (43.70%), Postives = 70/119 (58.82%), Query Frame = 2
Query:    2 LGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXXPEKPLKVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDV 358
            LGAD +LVSSD  K++ A  ++DYIIDTV   H L                     PL+     ++  R+ + GS IG MKET+EMLDFC +  + + IE+V+MD INTA+ERL K+DV
Sbjct:  224 LGADDYLVSSDTDKMQEAADSLDYIIDTVPVGHPLELYLSLLKIDGKLILIGVINTPLQFISPMVMLGRKSITGSFIGSMKETEEMLDFCKEKGVTSQIEIVKMDYINTAMERLEKNDV 342          
BLAST of CX291205 vs. ExPASy Swiss-Prot
Match: CADH1_EUCGU (Probable cinnamyl alcohol dehydrogenase 1 OS=Eucalyptus gunnii GN=CAD1 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.175e-18
Identity = 50/122 (40.98%), Postives = 71/122 (58.20%), Query Frame = 2
Query:    2 LGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXXPEKPLKV--PIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVK 361
            LGADA+LVSSD   +K A  ++DY+ DT+  VH L P                   PL+   P+  L      + GS IG MKET+EML+FC +  + + IE+++MD +NTA+ERL K+DV+
Sbjct:  224 LGADAYLVSSDENGMKEATDSLDYVFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVMLES----ITGSFIGSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERLEKNDVR 341          
The following BLAST results are available for this feature:
BLAST of CX291205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
CADH_EUCGL5.177e-2041.67Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH_EUCBO5.177e-2041.67Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH2_EUCGU5.177e-2041.67Probable cinnamyl alcohol dehydrogenase 2 OS=Eucal... [more]
CADH_POPDE6.762e-2043.33Probable cinnamyl alcohol dehydrogenase OS=Populus... [more]
ADHC_MYCTU6.762e-2042.50NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
ADHC_MYCBO6.762e-2042.50NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
CADH1_OCIBA1.967e-1942.50Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilic... [more]
CADH5_ARATH3.356e-1940.00Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis th... [more]
CADH2_TOBAC7.476e-1943.70Probable cinnamyl alcohol dehydrogenase 2 OS=Nicot... [more]
CADH1_EUCGU2.175e-1840.98Probable cinnamyl alcohol dehydrogenase 1 OS=Eucal... [more]

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Properties
Property NameValue
Genbank descriptionC03005C10SK OF2 Citrus clementina cDNA clone C03005C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291205 ID=CX291205; Name=CX291205; organism=Citrus clementina; type=EST; length=363bp
ACTTGGTGCTGATGCATTCCTTGTTTCCAGTGATCCTGCTAAAGTTAAGG
CTGCTATGGGCACTATGGATTACATTATTGACACTGTGTCAGCGGTTCAT
TCCCTTGCACCACTACTTGGTCTGCTGAAAGTGAATGGAAAGCTGGTCAC
CGTGGGCTTGCCTGAGAAGCCCCTAAAGGTGCCTATTTTTGCTTTAGTTG
GGGCTCGGAGGCTTGTTGGAGGAAGCAACATTGGAGGAATGAAGGAGACA
CAAGAGATGTTGGACTTTTGCGCCAAGCACAACATTGCTGCAGACATTGA
ACTGGTCCGGATGGACCAAATTAACACAGCCATAGAAAGGCTTGCAAAGT
CTGATGTCAAGTA
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