CX291222

Overview
NameCX291222
Unique NameCX291222
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length425
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291222 vs. ExPASy Swiss-Prot
Match: PER60_ARATH (Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.928e-19
Identity = 51/133 (38.35%), Postives = 75/133 (56.39%), Query Frame = 2
Query:    2 MNFYKDTCPQAEDIIREQVKLLYKRHKNTAXSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGG--PYIPLKTGRRDGRKSRAEILE 394
            + FY   C   E+I+ + V   + +  + A + +R  FHDC    CDASLLLD +    SEK+   +  +R +  I++IK AVE+EC  VVSCADI+ L+ RD V    G      + TGR DG+ S A +++
Sbjct:   30 LGFYSQNCQNVENIVSKVVGEAFIKDSSIAPAMIRLYFHDCFSNGCDASLLLDGSN---SEKKASPNLSVRGYEVIDDIKSAVEKECDRVVSCADIIALATRDLVTLASGGKTRYEIPTGRLDGKISSALLVD 159          
BLAST of CX291222 vs. ExPASy Swiss-Prot
Match: PER32_ARATH (Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=1 SV=3)

HSP 1 Score: 92.0485 bits (227), Expect = 9.928e-19
Identity = 52/134 (38.81%), Postives = 71/134 (52.99%), Query Frame = 2
Query:    8 FYKDTCPQAEDIIREQVKLLYKRHKNTAXSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLP 406
            FY +TCP    I+R+ +    +     A S LR  FHDC V  CDAS+LLD+T    +EK+    +   R F  I+ +K AVE  CP  VSCADIL ++ +  V   GGP   +  GRRD  ++   +    LP
Sbjct:   35 FYDNTCPSVFTIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAAPNANSARGFPVIDRMKAAVETACPRTVSCADILTIAAQQAVNLAGGPSWRVPLGRRDSLQAFFALANTNLP 168          
BLAST of CX291222 vs. ExPASy Swiss-Prot
Match: PER51_ARATH (Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.297e-18
Identity = 53/138 (38.41%), Postives = 74/138 (53.62%), Query Frame = 2
Query:    5 NFYKDTCPQAEDIIREQVKLLYKRHKNTAXSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMR--NFRYIENIKEAVER--ECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLP 406
            +FY  TCP  E I+R  V+   ++   T  + LR  FHDC V  CDAS+++ ST    +EK+ + +  +    F  +   KEAV+    C   VSCADIL ++ RD V   GGP   ++ GRRDG  S A  +   LP
Sbjct:   30 DFYAGTCPNVEQIVRNAVQKKIQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNTNKAEKDHEDNLSLAGDGFDTVIKAKEAVDAVPNCRNKVSCADILTMATRDVVNLAGGPQYAVELGRRDGLSSSASSVTGKLP 167          
BLAST of CX291222 vs. ExPASy Swiss-Prot
Match: PER1_HORVU (Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.889e-18
Identity = 53/138 (38.41%), Postives = 69/138 (50.00%), Query Frame = 2
Query:    8 FYKDTCPQAEDIIREQVKLLYKRHKNTAXSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDS 421
            FY  +CP+A   I+  V            S LR  FHDC VQ CDAS+LL      + +  +  +  +R F  I++IK  +E  C   VSCADIL ++ RD VVALGGP   +  GRRD   +        LP  N S
Sbjct:   27 FYDTSCPRALATIKSGVMAAVTSDPRMGASLLRLHFHDCFVQGCDASVLLSG----MEQNAIPNAGSLRGFGVIDSIKTQIEAICKQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSIDANENEANTDLPGFNSS 160          
BLAST of CX291222 vs. ExPASy Swiss-Prot
Match: PERX_TOBAC (Lignin-forming anionic peroxidase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.773e-18
Identity = 49/119 (41.18%), Postives = 64/119 (53.78%), Query Frame = 2
Query:    8 FYKDTCPQAEDIIREQVKLLYKRHKNTAXSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRD 364
            FY  TCP    I+R  +    +         +R  FHDC V  CD S+LLD T  T +EK+   + G   F  +++IK A+E  CPGVVSCADIL L+   GVV   GP   +  GR+D
Sbjct:   28 FYDTTCPNVTSIVRGVMDQRQRTDARAGAKIIRLHFHDCFVNGCDGSILLD-TDGTQTEKDAPANVGAGGFDIVDDIKTALENVCPGVVSCADILALASEIGVVLAKGPSWQVLFGRKD 145          
BLAST of CX291222 vs. ExPASy Swiss-Prot
Match: PER58_ARATH (Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.773e-18
Identity = 54/143 (37.76%), Postives = 73/143 (51.05%), Query Frame = 2
Query:    5 NFYKDTCPQAEDIIREQVKLLYKRHKNTAXSWLRNIFHDCAVQSCDASLLLDSTRK--TLSEKEMDRSFG-MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSM 424
            +FY  TCP    I R  ++   +         +R  FHDC V  CD S+LLD+        EKE  ++ G +  F  I++IK A+E  CPGVVSCADIL ++    V   GGP + +  GRRDGR +        LP   DS+
Sbjct:   28 DFYSTTCPNVTAIARGLIERASRNDVRLTAKVMRLHFHDCFVNGCDGSVLLDAAPADGVEGEKEAFQNAGSLDGFEVIDDIKTALENVCPGVVSCADILAIAAEISVALAGGPSLDVLLGRRDGRTAIRADAVAALPLGPDSL 170          
BLAST of CX291222 vs. ExPASy Swiss-Prot
Match: PER50_ARATH (Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.773e-18
Identity = 52/144 (36.11%), Postives = 75/144 (52.08%), Query Frame = 2
Query:    5 NFYKDTCPQAEDIIREQVKLLYKRHKNTAXSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMR--NFRYIENIKEAVER--ECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSM 424
            NFY  +CP  E I+R  V+   ++   T  + LR  FHDC V  CDAS+++ ST    +EK+ + +  +    F  +   KEA++    C   VSCADIL ++ RD V   GGP   ++ GR DG  S A  +   LP   D +
Sbjct:   30 NFYAGSCPNVEQIVRNAVQKKVQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNNNKAEKDHEENLSLAGDGFDTVIKAKEALDAVPNCRNKVSCADILTMATRDVVNLAGGPQYDVELGRLDGLSSTAASVGGKLPHPTDDV 173          
BLAST of CX291222 vs. ExPASy Swiss-Prot
Match: PER2_ORYSJ (Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PRX112 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.773e-18
Identity = 52/139 (37.41%), Postives = 67/139 (48.20%), Query Frame = 2
Query:    8 FYKDTCPQAEDIIREQVKLLYKRHKNTAXSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSM 424
            FY  +CP A   I+  V            S +R  FHDC VQ CDAS+LL    +         +  +R F  ++NIK  VE  C   VSCADIL ++ RD VVALGGP   +  GRRD   +        LP  + S+
Sbjct:   29 FYDTSCPNALSTIKSAVTAAVNSEPRMGASLVRLHFHDCFVQGCDASVLLSGQEQNAGPN----AGSLRGFNVVDNIKTQVEAICSQTVSCADILAVAARDSVVALGGPSWTVLLGRRDSTTANESQANTDLPAPSSSL 163          
BLAST of CX291222 vs. ExPASy Swiss-Prot
Match: PER2_ORYSI (Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX112 PE=3 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 3.773e-18
Identity = 52/139 (37.41%), Postives = 67/139 (48.20%), Query Frame = 2
Query:    8 FYKDTCPQAEDIIREQVKLLYKRHKNTAXSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSM 424
            FY  +CP A   I+  V            S +R  FHDC VQ CDAS+LL    +         +  +R F  ++NIK  VE  C   VSCADIL ++ RD VVALGGP   +  GRRD   +        LP  + S+
Sbjct:   29 FYDTSCPNALSTIKSAVTAAVNSEPRMGASLVRLHFHDCFVQGCDASVLLSGQEQNAGPN----AGSLRGFNVVDNIKTQVEAICSQTVSCADILAVAARDSVVALGGPSWTVLLGRRDSTTANESQANTDLPAPSSSL 163          
BLAST of CX291222 vs. ExPASy Swiss-Prot
Match: PER73_ARATH (Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.098e-17
Identity = 53/144 (36.81%), Postives = 78/144 (54.17%), Query Frame = 2
Query:    5 NFYKDTCPQAEDIIREQVKLLYKRHKNTAXSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMR--NFRYIENIKEAVER--ECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSM 424
            NFY ++CP  E I+++ V+   K+   T  + LR  FHDC V  CDAS+++ ST    +EK+   +  +    F  +   K+A++    C   VSCADIL L+ RD VVA  GP   ++ GR DG  S A  +   LP  N+ +
Sbjct:   30 NFYGNSCPNVEQIVKKVVQEKIKQTFVTIPATLRLFFHDCFVNGCDASVMIQSTPTNKAEKDHPDNISLAGDGFDVVIKAKKALDAIPSCKNKVSCADILALATRDVVVAAKGPSYAVELGRFDGLVSTAASVNGNLPGPNNKV 173          
The following BLAST results are available for this feature:
BLAST of CX291222 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
PER60_ARATH9.928e-1938.35Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=... [more]
PER32_ARATH9.928e-1938.81Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=... [more]
PER51_ARATH1.297e-1838.41Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=... [more]
PER1_HORVU2.889e-1838.41Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1[more]
PERX_TOBAC3.773e-1841.18Lignin-forming anionic peroxidase OS=Nicotiana tab... [more]
PER58_ARATH3.773e-1837.76Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=... [more]
PER50_ARATH3.773e-1836.11Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=... [more]
PER2_ORYSJ3.773e-1837.41Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER2_ORYSI3.773e-1837.41Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX1... [more]
PER73_ARATH1.098e-1736.81Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC03005E07SK OF2 Citrus clementina cDNA clone C03005E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291222 ID=CX291222; Name=CX291222; organism=Citrus clementina; type=EST; length=425bp
TATGAATTTTTACAAGGATACATGCCCTCAGGCCGAGGACATTATCAGGG
AACAAGTTAAGCTTCTGTACAAGCGCCACAAGAACACTGCATTNTCTTGG
CTTAGAAACATTTTCCATGACTGTGCTGTCCAGTCTTGTGATGCTTCACT
GCTTCTGGACTCGACAAGAAAGACCTTGTCTGAGAAGGAGATGGACAGGA
GCTTTGGTATGAGGAACTTCAGGTACATTGAGAACATCAAAGAAGCTGTT
GAAAGAGAGTGCCCTGGTGTTGTTTCCTGTGCTGATATCCTTGTCCTGTC
CGGTAGAGATGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCTCTCAAGA
CAGGAAGAAGAGATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCAGTAT
CTCCCAGATCACAATGACAGCATGT
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