CX291281

Overview
NameCX291281
Unique NameCX291281
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length534
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291281 vs. ExPASy Swiss-Prot
Match: PME_PRUPE (Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 4.030e-21
Identity = 67/172 (38.95%), Postives = 89/172 (51.74%), Query Frame = 1
Query:   25 NEDAHAWLSGVLTNHVTCLDGLDGSATKLMEPRLVELMARAANSLA--ILVAISPYNTNVIQQYYLRKEIQFPSWVTSRDRLLLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAPDNSKTRYVIYVKKGTYXXXXXXXXXXXXLMIVGDGMDLTIITGSLNVVDGSTTFK 534
            + D   WLS  L N  TC +G +G  T  +   L+        SL   +L  + P N+N  QQ       Q PSWV ++DR LL   Q            DG+GN+  V +AV +APD S  RYVIY+K+GTY            LM++GDGMD TII+G+ + VDG TTF+
Sbjct:  125 SSDLRTWLSAALVNQDTCSNGFEG--TNSIVQGLISAGLGQVTSLVQELLTQVHP-NSN--QQ---GPNGQIPSWVKTKDRKLL---QADGVSVDAIVAQDGTGNFTNVTDAVLAAPDYSMRRYVIYIKRGTYKENVEIKKKKWNLMMIGDGMDATIISGNRSFVDGWTTFR 285          
BLAST of CX291281 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.612e-20
Identity = 64/181 (35.36%), Postives = 93/181 (51.38%), Query Frame = 1
Query:   28 EDAHAWLSGVLTNHVTCLDGLD-GSATKLMEPRL----VELMARAANSLAILVAISPYNTNVIQQYYLRKEIQ-------FPSWVTSRDRLLLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAPDNSKTRYVIYVKKGTYXXXXXXXXXXXXLMIVGDGMDLTIITGSLNVVDGSTTFK 534
            +D    +S  +TN  TCLDG     A K +   L    V +    +N+LA++  ++  +  +++    RK I+       +P+W+++ DR LL+ S             DGSGN+KTV  +VA+AP     RY+I +K G Y            +M +GDG   TIITGS NVVDGSTTFK
Sbjct:  173 DDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLIEETSTVDGWPAWLSTGDRRLLQSSSVTPNVVVAA---DGSGNFKTVAASVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFK 350          
BLAST of CX291281 vs. ExPASy Swiss-Prot
Match: PME32_ARATH (Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana GN=PME32 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.456e-20
Identity = 61/176 (34.66%), Postives = 91/176 (51.70%), Query Frame = 1
Query:   31 DAHAWLSGVLTNHVTCLDGLDGS---ATKLMEPRLVELMARAANSLAILVAI-SPYNTNVIQQYYLRKE----IQFPSWVTSRDRLLLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAPDNSKTRYVIYVKKGTYXXXXXXXXXXXXLMIVGDGMDLTIITGSLNVVDGSTTFK 534
            D   W+S  L+N  TCLDG +G+     K++   L ++     N L ++ +  S      I+   + K      +FPSWV   DR LL+               DG+GN+ T+ +AV +APD S  RYVI+VK+G Y            +M+VGDG+D T+ITG+ + +DG TTF+
Sbjct:  118 DLRTWISAALSNQDTCLDGFEGTNGIIKKIVAGGLSKVGTTVRNLLTMVHSPPSKPKPKPIKAQTMTKAHSGFSKFPSWVKPGDRKLLQTDNITVADAVVAA--DGTGNFTTISDAVLAAPDYSTKRYVIHVKRGVYVENVEIKKKKWNIMMVGDGIDATVITGNRSFIDGWTTFR 291          
BLAST of CX291281 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 7.601e-20
Identity = 64/181 (35.36%), Postives = 91/181 (50.28%), Query Frame = 1
Query:   28 EDAHAWLSGVLTNHVTCLDGLD-GSATKLMEPRL----VELMARAANSLAILVAISPYNTNVIQQYYLRKEIQ-------FPSWVTSRDRLLLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAPDNSKTRYVIYVKKGTYXXXXXXXXXXXXLMIVGDGMDLTIITGSLNVVDGSTTFK 534
            +D    +S  +TN  TCLDG     A K +   L    V +    +N+LA++  ++  +  +++    RK  +       +P+W++  DR LL+ S             DGSGN+KTV  AVA+AP     RY+I +K G Y            +M +GDG   TIITGS NVVDGSTTFK
Sbjct:  173 DDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSSSVTPNAVVAA---DGSGNFKTVAAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFK 350          
BLAST of CX291281 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 8.403e-19
Identity = 64/183 (34.97%), Postives = 91/183 (49.73%), Query Frame = 1
Query:   28 EDAHAWLSGVLTNHVTCLDGL-----DGSATKLMEPRLVELMARAANSLAILVAISPYNTNVIQQYYL------RKEIQ----FPSWVTSRDRLLLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAPDNSKTRYVIYVKKGTYXXXXXXXXXXXXLMIVGDGMDLTIITGSLNVVDGSTTF 531
            ED    +S  +TN  TCLDG      D    K++      +    +N+LA++  ++  +T++  +  L      RK ++    +P W+++ DR LL+ S             DGSG+YKTV EAV  AP+ S  RYVI +K G Y            +M +GDG   TIIT S NV DGSTTF
Sbjct:  171 EDLKTLISSAITNQETCLDGFSHDEADKKVRKVLLKGQKHVEKMCSNALAMICNMT--DTDIANEMKLSAPANNRKLVEDNGEWPEWLSAGDRRLLQSSTVTPDVVVAA---DGSGDYKTVSEAVRKAPEKSSKRYVIRIKAGVYRENVDVPKKKTNIMFMGDGKSNTIITASRNVQDGSTTF 348          
BLAST of CX291281 vs. ExPASy Swiss-Prot
Match: PME12_ARATH (Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana GN=PME12 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.433e-18
Identity = 62/180 (34.44%), Postives = 91/180 (50.56%), Query Frame = 1
Query:   31 DAHAWLSGVLTNHVTCLDGLDGSATKLMEPRLVELMARA----ANSLAILV----AISPYNTNVIQQYYLRKEIQFPSWVTSRDRLLLRPSQXXXXXXXXXXXX----DGSGNYKTVKEAVASAPDNSKTRYVIYVKKGTYXXXXXXXXXXXXLMIVGDGMDLTIITGSLNVVDGSTTFK 534
            DA A+LS  LTN +TCL+GL+ SA+  ++P+LV          +NSL+ L       +P      +   L     FP WV  +D   L  S                 DG+GN+ T+ EA++ AP+ S  R +IYVK+G Y            ++++GDG D+T ITG+ +V DG TTF+
Sbjct:  138 DARAYLSAALTNKITCLEGLE-SASGPLKPKLVTSFTTTYKHISNSLSALPKQRRTTNPKTGGNTKNRRLLG--LFPDWVYKKDHRFLEDSSDGYDEYDPSESLVVAADGTGNFSTINEAISFAPNMSNDRVLIYVKEGVYDENIDIPIYKTNIVLIGDGSDVTFITGNRSVGDGWTTFR 314          
BLAST of CX291281 vs. ExPASy Swiss-Prot
Match: PME44_ARATH (Probable pectinesterase/pectinesterase inhibitor 44 OS=Arabidopsis thaliana GN=PME44 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 1.872e-18
Identity = 56/187 (29.95%), Postives = 91/187 (48.66%), Query Frame = 1
Query:   31 DAHAWLSGVLTNHVTCLDGLDGSA---TKLMEPRLVELMARAANSLAIL--------------VAISPYNT--NVIQQYYLRKEIQFPSWVTSRDRLLLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAPDNSKTRYVIYVKKGTYXXXXXXXXXXXXLMIVGDGMDLTIITGSLNVVDGSTTFK 534
            D   WLS  L+N  TC++G DG++     L+   L +L +     L ++              +A  P       ++     + +QFP WV   DR LL  +             DG+GN+  + +A+  APD S TR+VIY+KKG Y            ++++GDG+D+T+I+G+ + +DG TTF+
Sbjct:  106 DTRTWLSAALSNQATCMEGFDGTSGLVKSLVAGSLDQLYSMLRELLPLVQPEQKPKAVSKPGPIAKGPKAPPGRKLRDTDEDESLQFPDWVRPDDRKLLESN---GRTYDVSVALDGTGNFTKIMDAIKKAPDYSSTRFVIYIKKGLYLENVEIKKKKWNIVMLGDGIDVTVISGNRSFIDGWTTFR 289          
BLAST of CX291281 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 4.171e-18
Identity = 65/198 (32.83%), Postives = 93/198 (46.97%), Query Frame = 1
Query:   31 DAHAWLSGVLTNHVTCLDGL-----DGSATKLMEPRLVELMARAANSLAILVAISPYNTNVIQQYY--------LRKEIQ------------------FPSWVTSRDRLLLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAPDNSKTRYVIYVKKGTYXXXXXXXXXXXXLMIVGDGMDLTIITGSLNVVDGSTTF 531
            D    +S  +TN  TCLDG      D    K +    + +    +N+LA++  ++  +    +Q          L++E Q                  +P+W+++ DR LL+ S             DGSG +KTV  AVA+AP+NS  RYVI++K G Y            +M +GDG   TIITGS NVVDGSTTF
Sbjct:  163 DLKTLISSAITNQETCLDGFSHDDADKQVRKALLKGQIHVEHMCSNALAMIKNMTDTDIANFEQKAKITSNNRKLKEENQETTVAVDIAGAGELDSEGWPTWLSAGDRRLLQGS---GVKADATVAADGSGTFKTVAAAVAAAPENSNKRYVIHIKAGVYRENVEVAKKKKNIMFMGDGRTRTIITGSRNVVDGSTTF 357          
BLAST of CX291281 vs. ExPASy Swiss-Prot
Match: PME28_ARATH (Putative pectinesterase/pectinesterase inhibitor 28 OS=Arabidopsis thaliana GN=PME28 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.585e-17
Identity = 55/170 (32.35%), Postives = 87/170 (51.18%), Query Frame = 1
Query:   43 WLSGVLTNHVTCLDGLDGS---ATKLMEPRLVELMARAANSLAILVAISPYNTNV-IQQYYLRKEI--QFPSWVTSRDRLLLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAPDNSKTRYVIYVKKGTYXXXXXXXXXXXXLMIVGDGMDLTIITGSLNVVDGSTTFK 534
            WLS  +++  TCLDG  G+   A + ++  L   +    N LA++  +S Y   + I +   R+ +  +FPSW+ +R R LL  +             DGSG YKT+ EA+   P    T +V+++K+G Y            L+ +GDG D T+I+GS +  DG TT+K
Sbjct:  161 WLSATISHEQTCLDGFQGTQGNAGETIKKALKTAVQLTHNGLAMVTEMSNYLGQMQIPEMNSRRLLSQEFPSWMDARARRLLN-APMSEVKPDIVVAQDGSGQYKTINEALNFVPKKKNTTFVVHIKEGIYKEYVQVNRSMTHLVFIGDGPDKTVISGSKSYKDGITTYK 329          
BLAST of CX291281 vs. ExPASy Swiss-Prot
Match: PME26_ARATH (Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.070e-17
Identity = 64/180 (35.56%), Postives = 85/180 (47.22%), Query Frame = 1
Query:   16 TSSNEDAHAWLSGVLTNHVTCLDGLD-----GSATKLMEPRLVELMARAANSLAILVAI--SPYNTNV-IQQYYLRKEIQFPSWVTSRDRLLLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAPDNSKTRYVIYVKKGTYXXXXXXXXXXXXLMIVGDGMDLTIITGSLNVVDGSTTF 531
            +S+  D   WLS  +T+  TC D LD         + ++  +V      +NSLAI+  +   P  + + +Q   L     FP+WV    R LL   Q            DGSG+ +TV EAV   P   KT +VIYVK GTY            + I GDG D TII+GS N+VDG  TF
Sbjct:  560 SSTIGDLITWLSSAVTDIGTCGDTLDEDNYNSPIPQKLKSAMVNSTEFTSNSLAIVAQVLKKPSKSRIPVQGRRLLNSNSFPNWVRPGVRRLL---QAKNLTPHVTVAADGSGDVRTVNEAVWRVPKKGKTMFVIYVKAGTYVENVLMKKDKWNVFIYGDGRDKTIISGSTNMVDGVRTF 736          
The following BLAST results are available for this feature:
BLAST of CX291281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
PME_PRUPE4.030e-2138.95Pectinesterase/pectinesterase inhibitor PPE8B OS=P... [more]
PME3_CITSI2.612e-2035.36Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1[more]
PME32_ARATH4.456e-2034.66Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME1_CITSI7.601e-2035.36Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE... [more]
PMEU1_SOLLC8.403e-1934.97Pectinesterase/pectinesterase inhibitor U1 OS=Sola... [more]
PME12_ARATH1.433e-1834.44Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME44_ARATH1.872e-1829.95Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME3_ARATH4.171e-1832.83Pectinesterase/pectinesterase inhibitor 3 OS=Arabi... [more]
PME28_ARATH1.585e-1732.35Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME26_ARATH2.070e-1735.56Putative pectinesterase/pectinesterase inhibitor 2... [more]

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Properties
Property NameValue
Genbank descriptionC03006C02SK OF2 Citrus clementina cDNA clone C03006C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291281 ID=CX291281; Name=CX291281; organism=Citrus clementina; type=EST; length=534bp
ATTCGGCACGAGGGGACAAGTTCCAACGAAGATGCGCATGCATGGCTAAG
TGGCGTTCTTACTAACCACGTCACGTGCTTGGACGGCCTAGATGGCTCAG
CTACGAAGTTGATGGAGCCAAGGCTCGTTGAGTTGATGGCAAGAGCTGCA
AATTCTCTAGCCATTTTAGTGGCAATTTCCCCATACAACACCAACGTCAT
CCAGCAATATTACTTGAGAAAAGAAATTCAATTTCCGTCGTGGGTGACAA
GCAGGGACCGGTTGCTTTTACGGCCTTCTCAGGCTGAAGCAGCTAAGGCC
AACGTTGTGGTGGCTAAGGATGGAAGTGGAAACTATAAGACTGTGAAAGA
GGCCGTGGCATCAGCACCAGACAACAGCAAGACAAGGTACGTTATTTATG
TGAAGAAAGGAACGTACAAAGAAAATGTCGAGGTGGGCAAGAAAAAGAAA
AATCTTATGATTGTTGGTGATGGCATGGATTTGACCATCATCACCGGCAG
CCTTAACGTCGTTGACGGATCTACAACCTTCAAA
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