CX291281

Overview
NameCX291281
Unique NameCX291281
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length534
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291281 vs. ExPASy Swiss-Prot
Match: PME1_ARATH (Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.703e-17
Identity = 64/193 (33.16%), Postives = 89/193 (46.11%), Query Frame = 1
Query:   16 TSSNEDAHAWLSGVLTNHVTCLDGLDGS-------ATKLMEPRLVELMARA----ANSLAIL---------VAISPYNTNVIQQYYLRKEIQFPSWVTSRDRLLLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAPDNSKTRYVIYVKKGTYXXXXXXXXXXXXLMIVGDGMDLTIITGSLNVVDGSTTFK 534
            +S  ED   WLS  +T+H TC D LD         A   +   L   M+R+    +NSLAI+         + I  +    +  ++ ++ + F  W  +R RLL    Q            DG+G+  TV EAVA  P  S   +VIYVK GTY            +MI GDG   TII+GS N VDG+ T++
Sbjct:  171 SSKIEDLKTWLSATVTDHETCFDSLDELKQNKTEYANSTITQNLKSAMSRSTEFTSNSLAIVSKILSALSDLGIPIHRRRRLMSHHHQQSVDFEKW--ARRRLL----QTAGLKPDVTVAGDGTGDVLTVNEAVAKVPKKSLKMFVIYVKSGTYVENVVMDKSKWNVMIYGDGKGKTIISGSKNFVDGTPTYE 357          
BLAST of CX291281 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.531e-17
Identity = 61/187 (32.62%), Postives = 84/187 (44.92%), Query Frame = 1
Query:   13 GTSSNEDAHAWLSGVLTNHVTCLDGLD------GSATKLMEPRLVELMARAANSLAI-------LVAISPYNTNVIQQYYLRKEIQFPSWVTSRDRLLLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAPDNSKTRYVIYVKKGTY-XXXXXXXXXXXXLMIVGDGMDLTIITGSLNVVDGSTTF 531
            G  S+ D   WLS  +TNH TC DG D      G     +   + +L    +N LAI       L  +   N   +      +E+  P+W+   DR LL  +             DGSG +KT+ EA+  AP++S  R+VIYVK G Y             LM +GDG   T+ITG  ++ D  TTF
Sbjct:  167 GDESHSDVMTWLSSAMTNHDTCTDGFDEIEGQGGEVKDQVIGAVKDLSEMVSNCLAIFAGKVKDLSGVPVVNNRKLLGTEETEEL--PNWLKREDRELLG-TPTSAIQADITVSKDGSGTFKTIAEAIKKAPEHSSRRFVIYVKAGRYEEENLKVGRKKTNLMFIGDGKGKTVITGGKSIADDLTTF 350          
BLAST of CX291281 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.027e-16
Identity = 56/184 (30.43%), Postives = 85/184 (46.20%), Query Frame = 1
Query:    4 RHEGTSSNEDAHAWLSGVLTNHVTCLDGLDGSATKLMEPRLVELMAR-------AANSLAILVAISPYNTNVIQQYYLRKEIQFPSWVTSRDRLLLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAPDNSKTRYVIYVKKGTYXXXXXXXXXXXXLMIVGDGMDLTIITGSLNVVDGSTTFK 534
            R   ++S  +   WLS  LT+  TCLD +    +      L E+          A+NSLAI+  I    +      + R+ + FP W+ + +R LL   +            DGSG +KT+ EA+      S+ R+ +YVK+G Y            +MI GDG D T + GS N +DG+ TF+
Sbjct:  168 RIASSASVSNVETWLSAALTDQDTCLDAVGELNSTAARGALQEIETAMRNSTEFASNSLAIVTKILGLLSRFETPIHHRRLLGFPEWLGAAERRLLE-EKNNDSTPDAVVAKDGSGQFKTIGEALKLVKKKSEERFSVYVKEGRYVENIDLDKNTWNVMIYGDGKDKTFVVGSRNFMDGTPTFE 350          
BLAST of CX291281 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.027e-16
Identity = 64/194 (32.99%), Postives = 91/194 (46.91%), Query Frame = 1
Query:   28 EDAHAWLSGVLTNHVTCLDGL-----DGSATKLMEPRLVELMARAANSLAILVAISPYNTNVIQQYYLR--------------KEIQ-------FPSWVTSRDRLLLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAPDNSKTRYVIYVKKGTYXXXXXXXXXXXXLMIVGDGMDLTIITGSLNVVDGSTTF 531
            +D    +S  +TN  TCLDG      D    K +    V +    +N+LA++  ++  +   I  + LR              KE+        +P W++  DR LL+ S             DGSG++ TV  AVA+AP+ S  R+VI++K G Y            +M +GDG   TIITGS NVVDGSTTF
Sbjct:  165 DDLKTLISSAITNQGTCLDGFSYDDADRKVRKALLKGQVHVEHMCSNALAMIKNMTETD---IANFELRDKSSTFTNNNNRKLKEVTGDLDSDGWPKWLSVGDRRLLQGSTIKADATVAD---DGSGDFTTVAAAVAAAPEKSNKRFVIHIKAGVYRENVEVTKKKTNIMFLGDGRGKTIITGSRNVVDGSTTF 352          
BLAST of CX291281 vs. ExPASy Swiss-Prot
Match: PME21_ARATH (Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana GN=PME21 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 1.342e-16
Identity = 56/171 (32.75%), Postives = 84/171 (49.12%), Query Frame = 1
Query:   43 WLSGVLTNHVTCLDGLDGS---ATKLMEPRLVELMARAANSLAILVAISPYNTNV-IQQYYLRKEIQ--FPSWVTSRDRLLLRPSQXXXXXXXXXXXX-DGSGNYKTVKEAVASAPDNSKTRYVIYVKKGTYXXXXXXXXXXXXLMIVGDGMDLTIITGSLNVVDGSTTFK 534
            WLS  +++  TCL+G  G+   A + M+  L   +    N LAI+  +S +   + I     R+ +   FPSWV  R R LL+ +              DGSG YKT+ EA+   P    T +V+++K G Y            L+ +GDG D TII+G+ N  DG TT++
Sbjct:  162 WLSAAISHEETCLEGFQGTQGNAGETMKKALKTAIELTHNGLAIISEMSNFVGQMQIPGLNSRRLLAEGFPSWVDQRGRKLLQAAAAYSDVKPDIVVAQDGSGQYKTINEALQFVPKKRNTTFVVHIKAGLYKEYVQVNKTMSHLVFIGDGPDKTIISGNKNYKDGITTYR 332          
BLAST of CX291281 vs. ExPASy Swiss-Prot
Match: PME2_CITSI (Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.288e-16
Identity = 63/169 (37.28%), Postives = 83/169 (49.11%), Query Frame = 1
Query:   31 DAHAWLSGVLTNHVTCLDGL-DGSATKLMEPRLVELMARAANSLAILVAISPYNTNVIQQYYLRKEIQFPSWVTSRDRLLLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAPDNSKTRYVIYVKKGTYXXXXXXXXXXXXLMIVGDGMDLTIITGSLNVVDGSTTFK 534
            D   WLS  LTN  TC   L D    + + P L   + +  ++   L  + PYN    +         FP+WV   DR LL+ +             DGSGN KT++EAVA+A     +RYVIY+K GTY            +M VGDG+  TIITGS +V  G+TTFK
Sbjct:  123 DKQTWLSTALTNLETCRASLEDLGVPEYVLPLLSNNVTKLISNTLSLNKV-PYNEPSYKD-------GFPTWVKPGDRKLLQTTPRANIVVAQ----DGSGNVKTIQEAVAAASRAGGSRYVIYIKAGTY--NENIEVKLKNIMFVGDGIGKTIITGSKSVGGGATTFK 277          
BLAST of CX291281 vs. ExPASy Swiss-Prot
Match: PME13_ARATH (Probable pectinesterase/pectinesterase inhibitor 13 OS=Arabidopsis thaliana GN=PME13 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.989e-16
Identity = 50/168 (29.76%), Postives = 82/168 (48.81%), Query Frame = 1
Query:   31 DAHAWLSGVLTNHVTCLDGLD-GSATKLMEPRLVELMARAANSLAILVAISPYNTNVIQQYYLRKEIQFPSWVTSRDRLLLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAPDNSKTRYVIYVKKGTYXXXXXXXXXXXXLMIVGDGMDLTIITGSLNVVDGSTTF 531
            D  +WLS V++   TCLDG + G+    ++  +       +NSLA++   +   + V++          PSWV++ DR +LR               DGSG++ T+ +A+ + P+  + RY+IYVK+G Y            L +VGDG   TI+TG+ +      TF
Sbjct:  210 DLESWLSAVMSYQETCLDGFEEGNLKSEVKTSVNSSQVLTSNSLALIKTFTENLSPVMKVVERHLLDGIPSWVSNDDRRMLRAVDVKALKPNATVAKDGSGDFTTINDALRAMPEKYEGRYIIYVKQGIYDEYVTVDKKKANLTMVGDGSQKTIVTGNKSHAKKIRTF 377          
BLAST of CX291281 vs. ExPASy Swiss-Prot
Match: PME34_ARATH (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 3.904e-16
Identity = 61/180 (33.89%), Postives = 79/180 (43.89%), Query Frame = 1
Query:   28 EDAHAWLSGVLTNHVTCLDGLDG----SATKLMEPRLVELMARAANSLAILVAI---SPYNTNVIQQYYL----RKEIQFPSWVTSRDRLLLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAPDNSKTRYVIYVKKGTY-XXXXXXXXXXXXLMIVGDGMDLTIITGSLNVVDGSTTF 531
            +D   WLS  LTNH TC +G DG         M   L  L    +N LAI  A      +    IQ   L     +E +FP W+  ++R +L                DG+G  KT+ EA+  AP NS  R +IYVK G Y             LM VGDG   T+I+G  ++ D  TTF
Sbjct:  183 QDVTTWLSAALTNHDTCTEGFDGVDDGGVKDHMTAALQNLSELVSNCLAIFSASHDGDDFAGVPIQNRRLLGVEEREEKFPRWMRPKEREILE-MPVSQIQADIIVSKDGNGTCKTISEAIKKAPQNSTRRIIIYVKAGRYEENNLKVGRKKINLMFVGDGKGKTVISGGKSIFDNITTF 361          
BLAST of CX291281 vs. ExPASy Swiss-Prot
Match: PME17_ARATH (Probable pectinesterase/pectinesterase inhibitor 17 OS=Arabidopsis thaliana GN=PME17 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 6.658e-16
Identity = 66/173 (38.15%), Postives = 89/173 (51.45%), Query Frame = 1
Query:   22 SNEDAHAWLSGVLTNHVTCLDG-LDGSATKLMEPRLVELMARAANSLAILVAIS--PYNTNVIQQYYLRKEIQFPSWVTSRDRLLLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAPDNSKTRYVIYVKKGTYXXXXXXXXXXXXLMIVGDGMDLTIITGSLNVVDGSTTF 531
            S  DA  WLS  LTN  TC  G L+   T ++ P +       +N L   +AI+  P+N      Y   ++  FPSWV   DR LL+ S             DGSGN+KT+KEA+ +A  +   R+VIYVK+G Y            +M+ GDG+  TIITGS +V  G+TTF
Sbjct:  122 SKLDAQTWLSTALTNLDTCRAGFLELGVTDIVLPLMSN---NVSNLLCNTLAINKVPFN------YTPPEKDGFPSWVKPGDRKLLQSSTPKDNAVVAK---DGSGNFKTIKEAIDAASGSG--RFVIYVKQGVYSENLEIRKKN--VMLRGDGIGKTIITGSKSVGGGTTTF 278          
BLAST of CX291281 vs. ExPASy Swiss-Prot
Match: PME40_ARATH (Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana GN=PME40 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 8.696e-16
Identity = 52/177 (29.38%), Postives = 86/177 (48.59%), Query Frame = 1
Query:   46 LSGVLTNHVTCLDGLDGS---------------ATKLMEPRLVELMARAANSLAILVAISPYNTNVIQQYYLRKEIQFPSWVTSRDRLLLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAPDNSKTRYVIYVKKGTYXXXXXXXXXXXXLMIVGDGMDLTIITGSLNVVDGSTTF 531
            LS  +TN  TCLDG   S                 + ++  L  + +  ++SLA+L  I  +    +++     ++ FP WV+  DR LL+               +G+GNY T+ EA+++AP++S+TR+VIY+K G Y            +M +GDG+  T+I  + +  DG T F
Sbjct:  113 LSAAMTNTRTCLDGFASSDNDENLNNNDNKTYGVAESLKESLFNISSHVSDSLAMLENIPGHIPGKVKE-----DVGFPMWVSGSDRNLLQ-DPVDETKVNLVVAQNGTGNYTTIGEAISAAPNSSETRFVIYIKCGEYFENIEIPREKTMIMFIGDGIGRTVIKANRSYADGWTAF 283          
The following BLAST results are available for this feature:
BLAST of CX291281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
PME1_ARATH2.703e-1733.16Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 P... [more]
PME61_ARATH3.531e-1732.62Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME3_PHAVU1.027e-1630.43Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=... [more]
PME2_ARATH1.027e-1632.99Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 P... [more]
PME21_ARATH1.342e-1632.75Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME2_CITSI2.288e-1637.28Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE... [more]
PME13_ARATH2.989e-1629.76Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME34_ARATH3.904e-1633.89Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME17_ARATH6.658e-1638.15Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME40_ARATH8.696e-1629.38Probable pectinesterase/pectinesterase inhibitor 4... [more]

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Properties
Property NameValue
Genbank descriptionC03006C02SK OF2 Citrus clementina cDNA clone C03006C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291281 ID=CX291281; Name=CX291281; organism=Citrus clementina; type=EST; length=534bp
ATTCGGCACGAGGGGACAAGTTCCAACGAAGATGCGCATGCATGGCTAAG
TGGCGTTCTTACTAACCACGTCACGTGCTTGGACGGCCTAGATGGCTCAG
CTACGAAGTTGATGGAGCCAAGGCTCGTTGAGTTGATGGCAAGAGCTGCA
AATTCTCTAGCCATTTTAGTGGCAATTTCCCCATACAACACCAACGTCAT
CCAGCAATATTACTTGAGAAAAGAAATTCAATTTCCGTCGTGGGTGACAA
GCAGGGACCGGTTGCTTTTACGGCCTTCTCAGGCTGAAGCAGCTAAGGCC
AACGTTGTGGTGGCTAAGGATGGAAGTGGAAACTATAAGACTGTGAAAGA
GGCCGTGGCATCAGCACCAGACAACAGCAAGACAAGGTACGTTATTTATG
TGAAGAAAGGAACGTACAAAGAAAATGTCGAGGTGGGCAAGAAAAAGAAA
AATCTTATGATTGTTGGTGATGGCATGGATTTGACCATCATCACCGGCAG
CCTTAACGTCGTTGACGGATCTACAACCTTCAAA
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