CX291300

Overview
NameCX291300
Unique NameCX291300
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length574
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP71_SCHPO (Probable heat shock protein ssa1 OS=Schizosaccharomyces pombe GN=ssa1 PE=1 SV=2)

HSP 1 Score: 206.838 bits (525), Expect = 5.997e-53
Identity = 99/163 (60.74%), Postives = 133/163 (81.60%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 501
            +F+LSGIPPAPRG PQIEVTF+VDANGILNV A +KGTGK++KITITNDKGRLS+EEIDRMV EAE++  ED+    +I A+N LE+Y Y+++N ++D + L DK+++ +K+ I+ AVKE +EWLD N +A K++YE+K KE+E V NPI+  +YQ +GGAPG
Sbjct:  456 KFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSLDDPN-LKDKVDASDKEAIDKAVKETIEWLDHNTTAAKDEYEDKQKELEGVANPIMAKIYQ-AGGAPG 616          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP71_ARATH (Heat shock cognate 70 kDa protein 1 OS=Arabidopsis thaliana GN=HSC70-1 PE=1 SV=3)

HSP 1 Score: 206.838 bits (525), Expect = 5.997e-53
Identity = 93/163 (57.06%), Postives = 135/163 (82.82%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 501
            +F+LSGIPPAPRG PQI V F++DANGILNV AEDK TG+  KITITNDKGRLS++EI++MV+EAE++  ED++ K+K++A+N+LE Y YNM+N I D +K+ +KL + +K KIE ++++A++WL+ NQ AE +++E+K+KE+E++CNPII  +YQ +GG  G
Sbjct:  464 KFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIQD-EKIGEKLPAADKKKIEDSIEQAIQWLEGNQLAEADEFEDKMKELESICNPIIAKMYQGAGGEAG 625          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP70_DAUCA (Heat shock 70 kDa protein OS=Daucus carota GN=HSP70 PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 7.832e-53
Identity = 97/165 (58.79%), Postives = 131/165 (79.39%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAG 507
            +F+L+GIPPAPRG PQI V F++DANGILNV AEDK  G   KITITND GRLS++EI+++V+EAE++  ED++VK+K++A+N+LE Y YNM+N I D DK+  KL++ +K+KIETAV EA+EWL+ NQ AE ++ E+KLKE+E +CNPII  +YQ  G  P  G
Sbjct:  466 KFELTGIPPAPRGVPQINVVFDIDANGILNVFAEDKTAGVKNKITITNDNGRLSKDEIEKLVKEAEKYKAEDEEVKKKVEAKNALENYAYNMRNTIKD-DKIPGKLDAGDKEKIETAVNEAIEWLEKNQLAEVDELEDKLKELEGLCNPIIARLYQGRGDVPIGG 629          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP7C_CAEBR (Heat shock 70 kDa protein C OS=Caenorhabditis briggsae GN=hsp-3 PE=3 SV=2)

HSP 1 Score: 206.068 bits (523), Expect = 1.023e-52
Identity = 99/163 (60.74%), Postives = 126/163 (77.30%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 501
            +FDL+GIPPAPRG PQIEVTFE+D NGIL+V AEDKGTG   KITITND+ RLS E+I+RM+ +AE+FAE+DKKVKEK +ARN LE+Y Y++KNQI DK+KL  KL+ D+K  IE AV EA+ WL  N  A  E+ +E+ KE+E    PI++ +Y + GGA G
Sbjct:  486 KFDLTGIPPAPRGVPQIEVTFEIDVNGILHVTAEDKGTGNKNKITITNDQNRLSPEDIERMINDAEKFAEDDKKVKEKAEARNELESYAYSLKNQIGDKEKLGGKLDEDDKKTIEEAVDEAISWLGSNADASAEELKEQKKELEGKVQPIVSKLY-KDGGAGG 647          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP71_SOLLC (Heat shock cognate 70 kDa protein 1 OS=Solanum lycopersicum GN=HSC-I PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.023e-52
Identity = 96/163 (58.90%), Postives = 131/163 (80.37%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 501
            +F+LS IPPAPR  PQI V F++DANGILNV AEDK TG+  KITITNDKGRLS+EEI++MV+EAE++  ED+++K+K++A+NSLE Y YNM+N + D +K+  KL SD+K KIE AV +A+ WL+ NQ AE +++E+K+KE+E +CNPII  +YQ +GG  G
Sbjct:  466 KFELSVIPPAPRVVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEELKKKVEAKNSLENYAYNMRNTVKD-EKIGSKLSSDDKKKIEDAVDQAISWLESNQLAEVDEFEDKMKELEGICNPIIAKMYQGAGGDAG 627          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP70_THEPA (Heat shock 70 kDa protein OS=Theileria parva GN=TP02_0148 PE=2 SV=2)

HSP 1 Score: 206.068 bits (523), Expect = 1.023e-52
Identity = 99/167 (59.28%), Postives = 133/167 (79.64%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAGTE 513
            +F L+GI PAPRG PQIEVTF++DANGILNV A DK TGKSE +TITNDKGRLSQEEIDRMV EAE++ EED+K ++ +++++ LE Y Y+MKN +++ D++  KL +DE D     + EAL+W++ NQ AE +++E+KLK VE VCNP++T +YQ SGGAPGAG +
Sbjct:  459 KFHLTGIAPAPRGVPQIEVTFDIDANGILNVTAMDKSTGKSEHVTITNDKGRLSQEEIDRMVEEAEKYKEEDEKRRKCVESKHKLENYCYSMKNTLSE-DQVKQKLGADEVDNALNTITEALKWVETNQLAEHDEFEDKLKHVEGVCNPLVTKLYQ-SGGAPGAGPD 623          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP70_SOYBN (Heat shock 70 kDa protein OS=Glycine max GN=HSP70 PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.023e-52
Identity = 95/163 (58.28%), Postives = 129/163 (79.14%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 501
            +F+L+GIPPAPRG PQ+ V F++DANGILNV AEDK  G   KITITNDKGRLS+EEI++MV++AE +  ED++VK+K++A+NSLE Y YNM+N I D +K+  KL  DEK KIE AV++A++WL+ NQ AE +++E+K KE+E +CNPII  +YQ + G  G
Sbjct:  463 KFELTGIPPAPRGVPQVNVCFDIDANGILNVSAEDKTAGVKNKITITNDKGRLSKEEIEKMVKDAERYKAEDEEVKKKVEAKNSLENYAYNMRNTIKD-EKIGGKLSPDEKQKIEKAVEDAIQWLEGNQMAEVDEFEDKQKELEGICNPIIAKMYQGAAGPGG 624          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: GRP78_PLAFA (78 kDa glucose-regulated protein homolog (Fragment) OS=Plasmodium falciparum PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.023e-52
Identity = 94/160 (58.75%), Postives = 134/160 (83.75%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGG 492
            +F+LSGIPPA RG P+IEVTF VD NGIL+V+AEDKGTGKS  ITITNDKGRLS+E+I++M+ +AE+FA+EDK ++EK++A+N+L+ Y+ +MK  + DKDKLADK+E ++K+ I +AVK+A +WL++N +A+ E  ++KLK++EAVC PII  +Y + GG
Sbjct:  104 KFELSGIPPAQRGVPKIEVTFTVDKNGILHVEAEDKGTGKSRGITITNDKGRLSKEQIEKMINDAEKFADEDKNLREKVEAKNNLDNYIQSMKATVEDKDKLADKIEKEDKNTILSAVKDAEDWLNNNSNADSEALKQKLKDLEAVCQPIIVKLYGQPGG 263          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP7D_MANSE (Heat shock 70 kDa protein cognate 4 OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.336e-52
Identity = 97/163 (59.51%), Postives = 126/163 (77.30%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 501
            +F+L+GIPPAPRG PQIEVTF++DANGILNV A +K T K  KITITNDKGRLS+EEI+RMV EAE++  ED+K KE I A+N+LE+Y +NMK+ + D +KL DK+   +K  I     + ++WLD NQ A+KE+YE K KE+E +CNPIIT +YQ +GG PG
Sbjct:  458 KFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDEKQKETIQAKNALESYCFNMKSTMED-EKLKDKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKLYQGAGGMPG 619          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: GRP78_PLAFO (78 kDa glucose-regulated protein homolog OS=Plasmodium falciparum (isolate NF54) PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.336e-52
Identity = 94/160 (58.75%), Postives = 133/160 (83.12%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGG 492
            +F+LSGIPPA RG P+IEVTF VD NGIL+V+AEDKGTGKS  ITITNDKGRLS+E+I++M+ +AE+FA+EDK ++EK++A+N L+ Y+ +MK  + DKDKLADK+E ++K+ I +AVK+A +WL++N +A+ E  ++KLK++EAVC PII  +Y + GG
Sbjct:  480 KFELSGIPPAQRGVPKIEVTFTVDKNGILHVEAEDKGTGKSRGITITNDKGRLSKEQIEKMINDAEKFADEDKNLREKVEAKNKLDNYIQSMKATVEDKDKLADKIEKEDKNTILSAVKDAEDWLNNNSNADSEALKQKLKDLEAVCQPIIVKLYGQPGG 639          
The following BLAST results are available for this feature:
BLAST of CX291300 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP71_SCHPO5.997e-5360.74Probable heat shock protein ssa1 OS=Schizosaccharo... [more]
HSP71_ARATH5.997e-5357.06Heat shock cognate 70 kDa protein 1 OS=Arabidopsis... [more]
HSP70_DAUCA7.832e-5358.79Heat shock 70 kDa protein OS=Daucus carota GN=HSP7... [more]
HSP7C_CAEBR1.023e-5260.74Heat shock 70 kDa protein C OS=Caenorhabditis brig... [more]
HSP71_SOLLC1.023e-5258.90Heat shock cognate 70 kDa protein 1 OS=Solanum lyc... [more]
HSP70_THEPA1.023e-5259.28Heat shock 70 kDa protein OS=Theileria parva GN=TP... [more]
HSP70_SOYBN1.023e-5258.28Heat shock 70 kDa protein OS=Glycine max GN=HSP70 ... [more]
GRP78_PLAFA1.023e-5258.7578 kDa glucose-regulated protein homolog (Fragment... [more]
HSP7D_MANSE1.336e-5259.51Heat shock 70 kDa protein cognate 4 OS=Manduca sex... [more]
GRP78_PLAFO1.336e-5258.7578 kDa glucose-regulated protein homolog OS=Plasmo... [more]

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Properties
Property NameValue
Genbank descriptionC03006D12SK OF2 Citrus clementina cDNA clone C03006D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291300 ID=CX291300; Name=CX291300; organism=Citrus clementina; type=EST; length=574bp
ATTCGGCACGAGGAATTCGATCTTTCTGGAATTCCTCCAGCTCCTAGGGG
AACCCCTCAAATTGAAGTCACATTTGAAGTTGATGCAAATGGTATCTTAA
ATGTAAAGGCAGAAGACAAGGGCACAGGCAAATCAGAGAAAATTACCATC
ACAAATGACAAGGGTCGCCTGAGCCAGGAGGAGATTGATCGTATGGTTCG
TGAGGCTGAAGAATTTGCCGAGGAGGACAAGAAAGTAAAGGAGAAGATCG
ATGCTCGCAACAGCCTTGAGACCTATGTCTATAACATGAAAAACCAGATT
AATGACAAGGACAAGCTTGCCGACAAGCTCGAATCTGATGAGAAGGACAA
GATTGAAACTGCTGTAAAGGAAGCCCTTGAATGGCTCGATGACAACCAGA
GTGCAGAGAAAGAGGACTATGAAGAGAAGCTCAAGGAGGTTGAAGCCGTT
TGCAACCCCATCATCACTGCTGTATATCAGAGATCTGGCGGAGCCCCCGG
TGCTGGCACTGAATCATCGGATGATGATGATTCACACGATGAGCTCTAAA
GAATCTTTACTTCGATTGACCATA
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