CX291300

Overview
NameCX291300
Unique NameCX291300
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length574
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: DNAK_HALS3 (Chaperone protein dnaK OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=dnaK PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.537e-27
Identity = 71/171 (41.52%), Postives = 105/171 (61.40%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADK-LESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQ-----RSGGAPGAG 507
            +F L+GIPPAP GTPQIEVTFE+DA+GI+NV+AED+G+G +E ITI    G LS E+ID M  +AE  AEED++ + +I+ARN  ET +   ++ + + ++L D+ LE+D  D I+      ++ + D    E +  E   +E+      I    YQ     ++G A GAG
Sbjct:  429 DFHLTGIPPAPAGTPQIEVTFEIDADGIVNVEAEDQGSGNAESITIEGGAG-LSDEQIDEMQEDAEAHAEEDEQRRRRIEARNEAETAIQRAESLLEENEELVDEDLEADVNDAIDD-----VQAVLDEDEPEIDALETATEELSDTLQEIGKQAYQQQQDAQAGAAGGAG 593          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: DNAK_GLOVI (Chaperone protein dnaK OS=Gloeobacter violaceus GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.537e-27
Identity = 70/166 (42.17%), Postives = 104/166 (62.65%), Query Frame = 1
Query:   16 FDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLK-EVEAVCNPIITAVYQR---SGGAPG 501
            F L GIPPAPRG PQ+EVTF++DANGIL+V A+DK +GK++ I+IT     LS++++ +MV EAE FA EDKK +E +D +N  ++  Y  + Q+ +     DK++S +K KIE  +K+  E L    S E  D    LK +++     + + +YQ+   SG A G
Sbjct:  451 FRLDGIPPAPRGVPQVEVTFDIDANGILSVTAKDKASGKAQTISITG-ASTLSKDDVAKMVNEAESFAGEDKKRREAVDLKNEADSLAYQAERQLTE---FGDKVDSSDKSKIEGLIKDLREAL----SREDMDKVASLKADLQQAVYDLSSKLYQQSAPSGAAAG 608          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: DNAK_FUSNN (Chaperone protein dnaK OS=Fusobacterium nucleatum subsp. nucleatum GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.537e-27
Identity = 63/142 (44.37%), Postives = 92/142 (64.79%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKE 438
            EF+L GIP APRG PQIEVTF++DANGI++V A+D GTGK  K+TI+     LS+EEI+RM +EAE  AEEDKK +E ++ARN  +  +   +  + +     DK+  ++K  IE A++E  +  D +  +  +   EKL +
Sbjct:  427 EFNLEGIPAAPRGVPQIEVTFDIDANGIVHVSAKDLGTGKENKVTISG-SSNLSKEEIERMTKEAEAHAEEDKKFQELVEARNKADQLISATEKTLKEN---PDKVSEEDKKNIEAAIEELKKVKDGDDKSAIDSAMEKLSQ 564          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: DNAK_EUBE2 (Chaperone protein dnaK OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.537e-27
Identity = 74/175 (42.29%), Postives = 105/175 (60.00%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIET---AVKEALEWLD-----DNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAGTE 513
            +F L GIPPA RG PQIEVTF++DANGI+NV A+D GTGK + ITIT     +S E+ID+ V+EA EF  +DKK K+ IDARN  ++ V+  +  +   D+  DKL++ +K  +ET   A+K  ++  D     D Q  E +  +EKL E       +   +Y+    A GAG +
Sbjct:  429 QFRLDGIPPARRGVPQIEVTFDIDANGIVNVSAKDLGTGKEQHITITAG-SNMSDEDIDKAVKEAAEFEAQDKKRKDAIDARNEADSMVFQTQKAM---DEAGDKLDASDKAAVETDLNALKALVDGSDPENMTDAQVDEIKAAKEKLME---SAQKLFAKLYESQQAAGGAGPD 596          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: DNAK_CORDI (Chaperone protein dnaK OS=Corynebacterium diphtheriae GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.537e-27
Identity = 67/152 (44.08%), Postives = 103/152 (67.76%), Query Frame = 1
Query:   16 FDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDK-DKLADKLE---SDEKDKIETAVK----EALEWLDDNQSAEKEDYEEKLKEVEA 447
            F+L GI PAPRG PQIEVTF++DANGI++V A+DKGTGK   I I +  G LSQEEIDRMV++AE  AEEDKK +E+ + RNS E+  Y  +  +++  +K++++++   ++  D ++ A+K    EA++   +  S E ++  + + E EA
Sbjct:  431 FELGGIAPAPRGVPQIEVTFDIDANGIVHVTAKDKGTGKENTIKIQDGSG-LSQEEIDRMVKDAEAHAEEDKKRREEQETRNSAESMAYQTRKFLDENGEKVSEEIKTKVTEAADAVDEALKGEDIEAIKTAVEKLSTESQEMGKAIYEAEA 581          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: DNAK_CHLPD (Chaperone protein dnaK OS=Chlorobium phaeobacteroides (strain DSM 266) GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.537e-27
Identity = 68/165 (41.21%), Postives = 105/165 (63.64%), Query Frame = 1
Query:   16 FDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAGT 510
            F L  IPPAPRG PQIEVTF++D+NGIL+V A+DK TGK + I I    G+LS  EI++M R+A+E A ED K KE+ID++N+ +  +++ + Q+ +   L DK+ SD++  +E A+++     D  ++   E  +  + E+  V N + + +YQ    APGA T
Sbjct:  450 FHLGDIPPAPRGLPQIEVTFDIDSNGILSVSAKDKATGKEQSIKI-EASGKLSDAEIEKMKRDAKEHAAEDMKKKEEIDSKNAADGLIFSTEKQLAE---LGDKIPSDKRPALEGALEKL---KDATKNGTTESIKNAMDELSKVWNDVSSNLYQ----APGAET 603          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: DNAK_CAMHC (Chaperone protein dnaK OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.537e-27
Identity = 69/164 (42.07%), Postives = 99/164 (60.37%), Query Frame = 1
Query:   16 FDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVY--QRSGGAPG 501
            F+L GI PAPRG PQIEV F++DANGIL V A+DK TGK+  I IT   G LS EEID+MV++AE   E+DKK KE +DARN  +   +  +  +N+   + +K+ +D + KIE A+ +    L D ++A KE  + K+  +      +  A    + +GG  G
Sbjct:  451 FNLDGIMPAPRGVPQIEVEFDIDANGILTVSAKDKATGKATDIKITGSSG-LSDEEIDKMVKDAELHKEDDKKRKESVDARNGADAIAHQTEKTLNE---MGEKIPADLRAKIEAALNDLKAVLKD-ENATKEQIDAKVSALSKTAEEMYKAASAGKNAGGTAG 609          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: DNAK_BORDL (Chaperone protein dnaK OS=Borrelia duttonii (strain Ly) GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.537e-27
Identity = 62/141 (43.97%), Postives = 96/141 (68.09%), Query Frame = 1
Query:   16 FDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKE 438
            F L GIP APRG PQIEV+F++DANGI++V A+D GTGK +KI I +  G LS+EEI+RMV++AE  AEEDKK+KE I+A+N   + +Y  +  + +     +K+ + +K+ IE  +KE  + L+ +  +  +   E+L++
Sbjct:  452 FILDGIPAAPRGVPQIEVSFDIDANGIVHVSAKDMGTGKEQKIRIESSSG-LSEEEIERMVKDAESHAEEDKKLKEGIEAKNIANSLIYQTEKSLKE---YGEKITNQDKEAIENKIKELKDALEGSDISLLKSKTEELQQ 588          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: DNAK_BIFA0 (Chaperone protein dnaK OS=Bifidobacterium animalis subsp. lactis (strain AD011) GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.537e-27
Identity = 70/165 (42.42%), Postives = 102/165 (61.82%), Query Frame = 1
Query:   16 FDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQIND-KDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAG 507
            F+L+GI PAPRG PQIEVTF++DANGI++V A+DKGTGK + +TIT     L +EEID+M+++AE    +DKK KE  + RN+ E + Y  +  +ND KDKL+D +     D I   +K+AL+   D+    K   E+ + E + +      A+Y + G    AG
Sbjct:  436 FELTGIAPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGKEQSMTITGGSA-LPKEEIDQMIKDAEAHEADDKKRKEDAETRNNAENFAYQTEKLVNDNKDKLSDDVAKSVTDAI-NELKDALK--GDDIEKIKAAQEKLMTEAQKIGQ----ALYAQQGAEGAAG 592          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: DNAK_BDEBA (Chaperone protein dnaK OS=Bdellovibrio bacteriovorus GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.537e-27
Identity = 71/163 (43.56%), Postives = 105/163 (64.42%), Query Frame = 1
Query:   16 FDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGA 504
            F+L GIPPAPRG PQ+EVTF++DANGIL+V A+D  +GKS++I IT   G +S++EI R V +AE  AEEDK+  E    RN+L+  VY  +  I  KD  A   ES+ K   E AV EA + L +N+SA  ++ +   + ++ + + + + +Y++ G  PGA
Sbjct:  449 FELVGIPPAPRGVPQVEVTFDIDANGILHVSAKDMSSGKSQQIKITAQSG-MSEDEIKRAVADAEGHAEEDKRKAEAATQRNNLDNLVYQTEKLI--KDSGAQLPESEVKSANE-AVAEAKKIL-ENKSASGDELKGAFERLQNLTHKLTSELYKKQGAQPGA 606          
The following BLAST results are available for this feature:
BLAST of CX291300 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_HALS32.537e-2741.52Chaperone protein dnaK OS=Halobacterium salinarum ... [more]
DNAK_GLOVI2.537e-2742.17Chaperone protein dnaK OS=Gloeobacter violaceus GN... [more]
DNAK_FUSNN2.537e-2744.37Chaperone protein dnaK OS=Fusobacterium nucleatum ... [more]
DNAK_EUBE22.537e-2742.29Chaperone protein dnaK OS=Eubacterium eligens (str... [more]
DNAK_CORDI2.537e-2744.08Chaperone protein dnaK OS=Corynebacterium diphther... [more]
DNAK_CHLPD2.537e-2741.21Chaperone protein dnaK OS=Chlorobium phaeobacteroi... [more]
DNAK_CAMHC2.537e-2742.07Chaperone protein dnaK OS=Campylobacter hominis (s... [more]
DNAK_BORDL2.537e-2743.97Chaperone protein dnaK OS=Borrelia duttonii (strai... [more]
DNAK_BIFA02.537e-2742.42Chaperone protein dnaK OS=Bifidobacterium animalis... [more]
DNAK_BDEBA2.537e-2743.56Chaperone protein dnaK OS=Bdellovibrio bacteriovor... [more]

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Properties
Property NameValue
Genbank descriptionC03006D12SK OF2 Citrus clementina cDNA clone C03006D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291300 ID=CX291300; Name=CX291300; organism=Citrus clementina; type=EST; length=574bp
ATTCGGCACGAGGAATTCGATCTTTCTGGAATTCCTCCAGCTCCTAGGGG
AACCCCTCAAATTGAAGTCACATTTGAAGTTGATGCAAATGGTATCTTAA
ATGTAAAGGCAGAAGACAAGGGCACAGGCAAATCAGAGAAAATTACCATC
ACAAATGACAAGGGTCGCCTGAGCCAGGAGGAGATTGATCGTATGGTTCG
TGAGGCTGAAGAATTTGCCGAGGAGGACAAGAAAGTAAAGGAGAAGATCG
ATGCTCGCAACAGCCTTGAGACCTATGTCTATAACATGAAAAACCAGATT
AATGACAAGGACAAGCTTGCCGACAAGCTCGAATCTGATGAGAAGGACAA
GATTGAAACTGCTGTAAAGGAAGCCCTTGAATGGCTCGATGACAACCAGA
GTGCAGAGAAAGAGGACTATGAAGAGAAGCTCAAGGAGGTTGAAGCCGTT
TGCAACCCCATCATCACTGCTGTATATCAGAGATCTGGCGGAGCCCCCGG
TGCTGGCACTGAATCATCGGATGATGATGATTCACACGATGAGCTCTAAA
GAATCTTTACTTCGATTGACCATA
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