CX291300

Overview
NameCX291300
Unique NameCX291300
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length574
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: DNAK_ANAMM (Chaperone protein dnaK OS=Anaplasma marginale (strain St. Maries) GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.537e-27
Identity = 61/131 (46.56%), Postives = 92/131 (70.23%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSA 405
            +F L GIP APRG PQIEVTF++DANGI++V A+DK +GK + I I    G LS+EEI +MV++A++ AEED+K K++++ +NS E  +++ +  +ND     DK+ S +K  IE A+KE  E L ++ S+
Sbjct:  455 QFSLEGIPSAPRGIPQIEVTFDIDANGIVHVSAKDKASGKEQTIKI-QSSGGLSEEEIKKMVQDAQDRAEEDEKRKKRVELKNSAEALIHSTEKSLND---YGDKISSADKSGIEAAIKELRECLSNDDSS 581          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: DNAK_PSE14 (Chaperone protein dnaK OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.313e-27
Identity = 74/168 (44.05%), Postives = 104/168 (61.90%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDN-QSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAGTE 513
            +FDL+ IPPAPRG PQIEVTF++DANGIL+V A+DK TGK + I I  + G LS+EEI +MVR+AE  +EED+K +E   ARN  +  V++ +  I D     DK+ ++EK    TAV+ AL  L+   +  +K   E K++E+  V  PI   +Y      P A  +
Sbjct:  456 KFDLAEIPPAPRGVPQIEVTFDIDANGILHVGAKDKATGKQQSIVIKANSG-LSEEEIQQMVRDAEVNSEEDRKFEELASARNQGDALVHSTRKMIAD---AGDKVTAEEK----TAVEAALVALEAAIKGDDKAAIEAKVEELSKVSAPIAQKMYAEQAENPEAAAK 615          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: DNAK_MYCS2 (Chaperone protein dnaK OS=Mycobacterium smegmatis GN=dnaK PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.313e-27
Identity = 73/174 (41.95%), Postives = 104/174 (59.77%), Query Frame = 1
Query:   16 FDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDK-----DKLADKLESDEKDKIETAVKEALEWLDDNQ-SAEKEDYEEKLKEVEAVCNPIITAVYQR------SGGAPG 501
            F+L+GIPPAPRG PQIEVTF++DANGI++V A+DKGTGK   I I    G LS+EEIDRM+++AE  AEED+K +E+ D RN  E+ VY  +  + ++     D    K+  +   K+++A+ +A + L+    SA K   E+   E +A+   I  A            GAPG
Sbjct:  431 FELTGIPPAPRGVPQIEVTFDIDANGIVHVTAKDKGTGKENTIKIQEGSG-LSKEEIDRMIKDAEAHAEEDRKRREEADVRNQAESLVYQTEKFVAEQRGAASDGGGSKVPEETLAKVDSAIADAKKALEGTDISAIKSAMEKLGVESQALGQAIYEATQAEQPAGGSDNGAPG 603          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: DNAK_HAES2 (Chaperone protein dnaK OS=Haemophilus somnus (strain 2336) GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.313e-27
Identity = 70/164 (42.68%), Postives = 107/164 (65.24%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGA 504
            +F+L GI PAPRG PQIEVTF++DA+GI++V A+DKGTGK +KITI    G LS EEI +MVR+AE  AE D+K +E + ARN  +  V++ + Q+ +   + +KL +++K  IE+AV E LE     +  +K + + K++ +  V   ++ A  Q++    GA
Sbjct:  456 QFNLEGINPAPRGMPQIEVTFDIDADGIIHVSAKDKGTGKEQKITIKASSG-LSDEEIQQMVRDAEANAEADRKFEELVQARNQADHLVHSTRKQLAE---VGEKLSAEDKAPIESAVNE-LETAAKGE--DKTEIDAKVQALIQVSEKLLQASQQQAQADAGA 612          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: DNAK_HAES1 (Chaperone protein dnaK OS=Haemophilus somnus (strain 129Pt) GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.313e-27
Identity = 70/164 (42.68%), Postives = 107/164 (65.24%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGA 504
            +F+L GI PAPRG PQIEVTF++DA+GI++V A+DKGTGK +KITI    G LS EEI +MVR+AE  AE D+K +E + ARN  +  V++ + Q+ +   + +KL +++K  IE+AV E LE     +  +K + + K++ +  V   ++ A  Q++    GA
Sbjct:  456 QFNLEGINPAPRGMPQIEVTFDIDADGIIHVSAKDKGTGKEQKITIKASSG-LSDEEIQQMVRDAEANAEADRKFEELVQARNQADHLVHSTRKQLAE---VGEKLSAEDKAPIESAVNE-LETAAKGE--DKTEIDAKVQALIQVSEKLLQASQQQAQADAGA 612          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: DNAK_FRAAA (Chaperone protein dnaK OS=Frankia alni (strain ACN14a) GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.313e-27
Identity = 67/165 (40.61%), Postives = 108/165 (65.45%), Query Frame = 1
Query:   16 FDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDK-DKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAG 507
            F+L+G+PPAPRG PQIEVTF++DANGI++V A+D GTGK + +TIT     L +++IDRMVR+AE++AEED+  +E+ + RN  ET VY+ +  + +  +K+   ++SD ++K+ T ++ A+   D   +A +E  +      +A+   +     Q   GAPG+G
Sbjct:  430 FELTGLPPAPRGLPQIEVTFDIDANGIVHVSAKDLGTGKEQSMTITGGSA-LPRDDIDRMVRDAEQYAEEDRNRREEAETRNKAETLVYSTERFLAENGEKIDAAVKSDVEEKLGT-LRGAVAGTD--TAAIREAADALAAASQAMGQAMYEQAAQDGAGAPGSG 590          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: DNAK_DICT6 (Chaperone protein dnaK OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.313e-27
Identity = 69/166 (41.57%), Postives = 99/166 (59.64%), Query Frame = 1
Query:   16 FDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQ--RSGGAPGAG 507
            F L GIPPAPRG PQIEVTF++D NGI++V A DK TG+ ++ITI+N   RLS+EEI RM  EA+ F EED+K +E+I+ +N  E  +Y  +  + D     DK+  D   ++E  +K  LE L   +    E  ++ ++E+      I   +YQ   + G PG G
Sbjct:  428 FILDGIPPAPRGVPQIEVTFDIDVNGIVHVSARDKATGREQRITISN-AIRLSEEEIKRMTEEAKRFEEEDRKRREEIETKNQAEHLIYTARKTLKD---YGDKVSKDLVQRVEDKIKN-LEELIKPERINVEQVKKGMEELTQALGEIGQFMYQSASAAGNPGQG 588          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: DNAK_DESPS (Chaperone protein dnaK OS=Desulfotalea psychrophila GN=dnaK PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.313e-27
Identity = 72/168 (42.86%), Postives = 105/168 (62.50%), Query Frame = 1
Query:   16 FDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIE---TAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQR-SGGAPGAG 507
            F+L+ IP APRG PQIEVTF++DANGILNV A+D GTGK + I IT   G L+ EEIDRM ++AE  A+EDKK KE ++ARNS +  +++ +  + D   L DK++++ K+ +E     VK ALE        + E  +  ++ + A  + +   +YQ+ S   PG G
Sbjct:  452 FELADIPTAPRGVPQIEVTFDLDANGILNVSAKDMGTGKEQSIKITASSG-LTDEEIDRMTKDAELHADEDKKRKELVEARNSADGLIHSTEKTLKD---LGDKVDAETKENVEKEIANVKTALE------GDDVEAIKAAIEALTAASHKLAELMYQQASQETPGDG 609          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: DNAK1_VIBF1 (Chaperone protein dnaK 1 OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=dnaK1 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.313e-27
Identity = 71/164 (43.29%), Postives = 101/164 (61.59%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGA 504
            +F+L GI  APRG PQIEVTF++DA+GILNV A+DK TGK +KITI    G L+ EEI+ MV+EAE   + DKK +E + ARN  +  ++  K QI   ++  D L +DEK+KIE A+  ALE +      +KE  + K +E+      ++    Q++    GA
Sbjct:  455 QFNLEGIQAAPRGMPQIEVTFDLDADGILNVSAKDKSTGKEQKITI-QASGGLTDEEIEAMVQEAEANKDADKKFEELVTARNQADQMIHGTKKQI---EEAGDDLPTDEKEKIEAAI-TALEGVKSGD--DKEAIDAKTQELMQAAQKLMEIAQQKAQAQQGA 611          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: DNAK_TOLAT (Chaperone protein dnaK OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=dnaK PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.327e-27
Identity = 73/158 (46.20%), Postives = 99/158 (62.66%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRS 486
            +F+L GI PAPRG PQIEVTF++DA+GIL+V A+DK TGK + ITI    G LS +EI RMVREAE  A EDKK +E + ARN  +  ++  + QI +       L +DEK KI+ AVK ALE  D  +S +K   E K +E+      ++    Q++
Sbjct:  456 QFNLEGIRPAPRGLPQIEVTFDIDADGILHVSAKDKETGKEQNITIQASSG-LSDDEIQRMVREAEANAAEDKKFEELVQARNHADALIHATRKQITE---AGTALPADEKAKIDAAVK-ALE--DALKSEDKATIEAKQQELMTASQKLMEIAQQQA 606          
The following BLAST results are available for this feature:
BLAST of CX291300 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_ANAMM2.537e-2746.56Chaperone protein dnaK OS=Anaplasma marginale (str... [more]
DNAK_PSE143.313e-2744.05Chaperone protein dnaK OS=Pseudomonas syringae pv.... [more]
DNAK_MYCS23.313e-2741.95Chaperone protein dnaK OS=Mycobacterium smegmatis ... [more]
DNAK_HAES23.313e-2742.68Chaperone protein dnaK OS=Haemophilus somnus (stra... [more]
DNAK_HAES13.313e-2742.68Chaperone protein dnaK OS=Haemophilus somnus (stra... [more]
DNAK_FRAAA3.313e-2740.61Chaperone protein dnaK OS=Frankia alni (strain ACN... [more]
DNAK_DICT63.313e-2741.57Chaperone protein dnaK OS=Dictyoglomus thermophilu... [more]
DNAK_DESPS3.313e-2742.86Chaperone protein dnaK OS=Desulfotalea psychrophil... [more]
DNAK1_VIBF13.313e-2743.29Chaperone protein dnaK 1 OS=Vibrio fischeri (strai... [more]
DNAK_TOLAT4.327e-2746.20Chaperone protein dnaK OS=Tolumonas auensis (strai... [more]

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Properties
Property NameValue
Genbank descriptionC03006D12SK OF2 Citrus clementina cDNA clone C03006D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291300 ID=CX291300; Name=CX291300; organism=Citrus clementina; type=EST; length=574bp
ATTCGGCACGAGGAATTCGATCTTTCTGGAATTCCTCCAGCTCCTAGGGG
AACCCCTCAAATTGAAGTCACATTTGAAGTTGATGCAAATGGTATCTTAA
ATGTAAAGGCAGAAGACAAGGGCACAGGCAAATCAGAGAAAATTACCATC
ACAAATGACAAGGGTCGCCTGAGCCAGGAGGAGATTGATCGTATGGTTCG
TGAGGCTGAAGAATTTGCCGAGGAGGACAAGAAAGTAAAGGAGAAGATCG
ATGCTCGCAACAGCCTTGAGACCTATGTCTATAACATGAAAAACCAGATT
AATGACAAGGACAAGCTTGCCGACAAGCTCGAATCTGATGAGAAGGACAA
GATTGAAACTGCTGTAAAGGAAGCCCTTGAATGGCTCGATGACAACCAGA
GTGCAGAGAAAGAGGACTATGAAGAGAAGCTCAAGGAGGTTGAAGCCGTT
TGCAACCCCATCATCACTGCTGTATATCAGAGATCTGGCGGAGCCCCCGG
TGCTGGCACTGAATCATCGGATGATGATGATTCACACGATGAGCTCTAAA
GAATCTTTACTTCGATTGACCATA
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