CX291300

Overview
NameCX291300
Unique NameCX291300
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length574
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP7C_CAEEL (Heat shock 70 kDa protein C OS=Caenorhabditis elegans GN=hsp-3 PE=2 SV=2)

HSP 1 Score: 205.297 bits (521), Expect = 1.745e-52
Identity = 97/171 (56.73%), Postives = 131/171 (76.61%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGG----APGAGTE 513
            +FDL+G+PPAPRG PQIEVTFE+D NGIL+V AEDKGTG   KITITND+ RLS E+I+RM+ +AE+FAE+DKKVK+K +ARN LE+Y YN+KNQI DK+KL  KL+ D+K  IE AV+EA+ WL  N  A  E+ +E+ K++E+   PI++ +Y+ +G     AP  G++
Sbjct:  486 KFDLTGLPPAPRGVPQIEVTFEIDVNGILHVTAEDKGTGNKNKITITNDQNRLSPEDIERMINDAEKFAEDDKKVKDKAEARNELESYAYNLKNQIEDKEKLGGKLDEDDKKTIEEAVEEAISWLGSNAEASAEELKEQKKDLESKVQPIVSKLYKDAGAGGEEAPEEGSD 656          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP72_USTMA (Heat shock 70 kDa protein 2 OS=Ustilago maydis GN=UMS2 PE=3 SV=2)

HSP 1 Score: 205.297 bits (521), Expect = 1.745e-52
Identity = 96/163 (58.90%), Postives = 129/163 (79.14%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 501
            +F+LSGIPPAPRG PQIEVTF+VDAN ILNV A +KGTGKSEKITI NDKGRLS E+I+ M+++AE+FAEEDK+  E+  A+N LE+Y+YN++N  N+  +L DKLE+ +K+ +E  VKE +EWLD N +A  ++ ++K KE+E   NPI+T +Y  +GGAPG
Sbjct:  456 KFELSGIPPAPRGVPQIEVTFDVDANAILNVSAAEKGTGKSEKITIRNDKGRLSSEQIEEMLKQAEQFAEEDKQALERTQAKNGLESYIYNVRNTTNE-PQLKDKLEAADKEALEKIVKEGIEWLDSNTTASTDELKDKQKEIEEQVNPIMTKIYSAAGGAPG 617          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP72_SCHPO (Probable heat shock protein ssa2 OS=Schizosaccharomyces pombe GN=ssa2 PE=1 SV=3)

HSP 1 Score: 204.142 bits (518), Expect = 3.887e-52
Identity = 97/163 (59.51%), Postives = 133/163 (81.60%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 501
            +F+LSGIPPAPRG PQIEVTF+VDANGILNV A +KGTGK++KITITNDKGRLS+EEIDRMV EAE++  ED+    +I A+N LE+Y Y+++N ++D + L DK+++ +K+ ++ AVKE +EWLD N +A K+++E K KE+E+V NPI+  +YQ +GGAPG
Sbjct:  456 KFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNSLDDPN-LKDKVDASDKETVDKAVKETIEWLDSNTTAAKDEFEAKQKELESVANPIMAKIYQ-AGGAPG 616          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP70_ONCMY (Heat shock cognate 70 kDa protein OS=Oncorhynchus mykiss GN=hsc71 PE=2 SV=2)

HSP 1 Score: 204.142 bits (518), Expect = 3.887e-52
Identity = 97/167 (58.08%), Postives = 128/167 (76.65%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAGTE 513
            +F+L+GIPPAPRG PQIEVTF++DANGI+NV A DK TGK  KITITNDKGRLS+E+I+RMV+EAE++  ED   ++K+ ++NSLE+Y +NMK+ + D +KL  K+  ++K KI     E + WLD NQ+AEKE+YE   KE+E VCNPIIT +YQ +GG PG   E
Sbjct:  458 KFELTGIPPAPRGVPQIEVTFDIDANGIMNVSAADKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKCEDDVQRDKVSSKNSLESYAFNMKSTVED-EKLQGKISDEDKTKILEKCNEVIGWLDKNQTAEKEEYEHHQKELEKVCNPIITKLYQGAGGMPGGMPE 623          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP70_SCHJA (Heat shock 70 kDa protein (Fragment) OS=Schistosoma japonicum PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 5.076e-52
Identity = 99/163 (60.74%), Postives = 129/163 (79.14%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKL-ESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAP 498
            +F+LSGIPPAPRG PQIEVTF++DANGILNV A DK TGK  KITITNDKGRLS+EEIDRM+ EA+ +  ED+K K +I A+NSLE+YVY+MK  + + D++ DK+ ESD K++I +  +E + W+D+NQ AEKE++EEK  E+E VC PIITA+ +  GG P
Sbjct:   13 KFELSGIPPAPRGVPQIEVTFDIDANGILNVSAVDKATGKENKITITNDKGRLSKEEIDRMINEADRYKSEDEKQKNRICAKNSLESYVYSMKQSV-EGDEMKDKISESDRKNRILSKCEETIRWMDNNQLAEKEEFEEKKSELEKVCMPIITAMNRAGGGVP 174          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP7C_ICTPU (Heat shock cognate 71 kDa protein OS=Ictalurus punctatus GN=hsc70 PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 6.630e-52
Identity = 94/163 (57.67%), Postives = 126/163 (77.30%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 501
            +F+L+GIPPAPRG PQIEVTF++DANGI+NV A DK TGK  KITITNDKGRLS+E+I+RMV+EAE++  ED   ++K+ A+N LE+Y +NMK+ + D +KL  K+  ++K KI     E + WLD NQ+AEK++YE + K++E VCNPIIT +YQ  GG PG
Sbjct:  458 KFELTGIPPAPRGVPQIEVTFDIDANGIMNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDDVQRDKVSAKNGLESYAFNMKSTVED-EKLKGKISDEDKHKILDKCNEVISWLDKNQTAEKDEYEHQQKDLEKVCNPIITKLYQSDGGMPG 619          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP7C_DANRE (Heat shock cognate 71 kDa protein OS=Danio rerio GN=hspa8 PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 6.630e-52
Identity = 95/167 (56.89%), Postives = 128/167 (76.65%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAGTE 513
            +F+L+GIPPAPRG PQIEVTF++DANGI+NV A DK TGK  KITITNDKGRLS+E+I+RMV+EAE++  ED   ++K+ A+N LE+Y +NMK+ + D +KL  K+  ++K KI     E + WLD NQ+AE+E++E + KE+E VCNPIIT +YQ +GG PG   E
Sbjct:  458 KFELTGIPPAPRGVPQIEVTFDIDANGIMNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDDVQRDKVSAKNGLESYAFNMKSTVED-EKLKGKISDEDKQKILDKCNEVIGWLDKNQTAEREEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPE 623          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP7A_CAEEL (Heat shock 70 kDa protein A OS=Caenorhabditis elegans GN=hsp-1 PE=1 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 8.659e-52
Identity = 95/162 (58.64%), Postives = 128/162 (79.01%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAP 498
            +F+LSGIPPAPRG PQIEVTF++DANGILNV A DK TGK  KITITNDKGRLS+++I+RMV EAE++  +D+  K++I A+N LE+Y +N+K  I D +KL DK+  ++K KIE    E L+WLD NQ+AEKE++E + K++E + NPII+ +YQ +GGAP
Sbjct:  459 KFELSGIPPAPRGVPQIEVTFDIDANGILNVSATDKSTGKQNKITITNDKGRLSKDDIERMVNEAEKYKADDEAQKDRIGAKNGLESYAFNLKQTIED-EKLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISKLYQSAGGAP 619          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP70_PYRSA (Heat shock 70 kDa protein OS=Pyrenomonas salina GN=HSP70 PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.131e-51
Identity = 97/165 (58.79%), Postives = 131/165 (79.39%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAG 507
            +F+L+GIPPAPRG PQIEVTF++DANGILNV A DK TGKS KITITNDKGRLS+EEI+RMV EAE++  ED+K+ +K++A+NSLE Y YN++N + D +KL +K++ ++K  IE  VKE LE+++ N+  EKE+YEEK KE++   NPII+ +YQ+ G  P  G
Sbjct:  464 KFELTGIPPAPRGVPQIEVTFDIDANGILNVSASDKSTGKSNKITITNDKGRLSKEEIERMVEEAEKYKTEDEKLDKKLEAKNSLENYAYNIRNTVRD-EKLKEKIQEEDKKSIEEKVKEVLEFIETNEDLEKEEYEEKEKELKNFANPIISKLYQQ-GSVPDMG 626          
BLAST of CX291300 vs. ExPASy Swiss-Prot
Match: HSP7E_SPIOL (Chloroplast envelope membrane 70 kDa heat shock-related protein OS=Spinacia oleracea GN=SCE70 PE=1 SV=3)

HSP 1 Score: 202.216 bits (513), Expect = 1.477e-51
Identity = 92/167 (55.09%), Postives = 131/167 (78.44%), Query Frame = 1
Query:   13 EFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAGTE 513
            +F+LSGIPP PRG PQI V F++DANGILNV AEDK TG+  KI ITNDKGRLS+EEI++MV+EAE++  ED++ K+K++++N+LE Y YNM+N + D +K+  KL   +K KIE A+  +++WLD NQ AE +++++K+KE+E++CNPII  +YQ +GG  G G E
Sbjct:  464 KFELSGIPPGPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKIRITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVESKNALENYAYNMRNIVKD-EKIGAKLSEADKKKIEEAIDASIQWLDGNQLAEADEFDDKMKELESICNPIIAKMYQGAGGDMGGGME 629          
The following BLAST results are available for this feature:
BLAST of CX291300 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7C_CAEEL1.745e-5256.73Heat shock 70 kDa protein C OS=Caenorhabditis eleg... [more]
HSP72_USTMA1.745e-5258.90Heat shock 70 kDa protein 2 OS=Ustilago maydis GN=... [more]
HSP72_SCHPO3.887e-5259.51Probable heat shock protein ssa2 OS=Schizosaccharo... [more]
HSP70_ONCMY3.887e-5258.08Heat shock cognate 70 kDa protein OS=Oncorhynchus ... [more]
HSP70_SCHJA5.076e-5260.74Heat shock 70 kDa protein (Fragment) OS=Schistosom... [more]
HSP7C_ICTPU6.630e-5257.67Heat shock cognate 71 kDa protein OS=Ictalurus pun... [more]
HSP7C_DANRE6.630e-5256.89Heat shock cognate 71 kDa protein OS=Danio rerio G... [more]
HSP7A_CAEEL8.659e-5258.64Heat shock 70 kDa protein A OS=Caenorhabditis eleg... [more]
HSP70_PYRSA1.131e-5158.79Heat shock 70 kDa protein OS=Pyrenomonas salina GN... [more]
HSP7E_SPIOL1.477e-5155.09Chloroplast envelope membrane 70 kDa heat shock-re... [more]

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Properties
Property NameValue
Genbank descriptionC03006D12SK OF2 Citrus clementina cDNA clone C03006D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291300 ID=CX291300; Name=CX291300; organism=Citrus clementina; type=EST; length=574bp
ATTCGGCACGAGGAATTCGATCTTTCTGGAATTCCTCCAGCTCCTAGGGG
AACCCCTCAAATTGAAGTCACATTTGAAGTTGATGCAAATGGTATCTTAA
ATGTAAAGGCAGAAGACAAGGGCACAGGCAAATCAGAGAAAATTACCATC
ACAAATGACAAGGGTCGCCTGAGCCAGGAGGAGATTGATCGTATGGTTCG
TGAGGCTGAAGAATTTGCCGAGGAGGACAAGAAAGTAAAGGAGAAGATCG
ATGCTCGCAACAGCCTTGAGACCTATGTCTATAACATGAAAAACCAGATT
AATGACAAGGACAAGCTTGCCGACAAGCTCGAATCTGATGAGAAGGACAA
GATTGAAACTGCTGTAAAGGAAGCCCTTGAATGGCTCGATGACAACCAGA
GTGCAGAGAAAGAGGACTATGAAGAGAAGCTCAAGGAGGTTGAAGCCGTT
TGCAACCCCATCATCACTGCTGTATATCAGAGATCTGGCGGAGCCCCCGG
TGCTGGCACTGAATCATCGGATGATGATGATTCACACGATGAGCTCTAAA
GAATCTTTACTTCGATTGACCATA
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